RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 FEM1CQ96JP0 617 aa9.23□□□□□ -0.93
DHFR-202ENST00000504396 KREMEN1Q96MU8 473 aa9.23□□□□□ -0.93
DHFR-202ENST00000504396 SLC46A1Q96NT5 459 aa9.23□□□□□ -0.93
DHFR-202ENST00000504396 SPON2Q9BUD6 331 aa9.23□□□□□ -0.93
DHFR-202ENST00000504396 SLC17A9Q9BYT1 436 aa9.23□□□□□ -0.93
DHFR-202ENST00000504396 INTS2Q9H0H0 1204 aaKnown RBP9.23□□□□□ -0.93
DHFR-202ENST00000504396 ZDHHC6Q9H6R6 413 aa9.23□□□□□ -0.93
DHFR-202ENST00000504396 UBE2TQ9NPD8 197 aaPredicted RBP9.23□□□□□ -0.93
DHFR-202ENST00000504396 TBC1D30Q9Y2I9 924 aa9.23□□□□□ -0.93
DHFR-202ENST00000504396 TENM4Q6N022 2769 aa9.23□□□□□ -0.93
DHFR-202ENST00000504396 MGAQ8IWI9 3026 aa9.23□□□□□ -0.93
DHFR-202ENST00000504396 SPTY2D1-AS1A0A0U1RR47 76 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 AGRPO00253 132 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 RAD51BO15315 384 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 SMAD6O43541 496 aaKnown RBP9.22□□□□□ -0.93
DHFR-202ENST00000504396 GNA14O95837 355 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 CSF2P04141 144 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 ADRB3P13945 408 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 NME1P15531 152 aaKnown RBP9.22□□□□□ -0.93
DHFR-202ENST00000504396 GSK3AP49840 483 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 THOP1P52888 689 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 TNP2Q05952 138 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 C1orf61Q13536 156 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 TCEA2Q15560 299 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 ALFQ53S48 1182 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 PRRT3Q5FWE3 981 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 LRRC31Q6UY01 552 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 DPY19L3Q6ZPD9 716 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 FAM183BPQ6ZVS7 135 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 USP53Q70EK8 1073 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 C14orf80Q86SX3 495 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 CREBRFQ8IUR6 639 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 RBFAQ8N0V3 343 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 FMR1NBQ8N0W7 255 aaPredicted RBP9.22□□□□□ -0.93
DHFR-202ENST00000504396 DCAF4L2Q8NA75 395 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 WDR36Q8NI36 951 aaKnown RBP9.22□□□□□ -0.93
DHFR-202ENST00000504396 ZNF606Q8WXB4 792 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 NAT6Q93015 286 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 PPP1R13BQ96KQ4 1090 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 BMFQ96LC9 184 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 TIGD1Q96MW7 591 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 SLC2A13Q96QE2 648 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 CCNL2Q96S94 520 aaPredicted RBP9.22□□□□□ -0.93
DHFR-202ENST00000504396 PSMB7Q99436 277 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 HDAC8Q9BY41 377 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 EPB41L5Q9HCM4 733 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 ACP6Q9NPH0 428 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 SPASTQ9UBP0 616 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 APOBEC3BQ9UH17 382 aaKnown RBP9.22□□□□□ -0.93
DHFR-202ENST00000504396 CTNND2Q9UQB3 1225 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 ZDHHC9Q9Y397 364 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 PCDHGA8Q9Y5G5 932 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 OR51B4Q9Y5P0 310 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 HS3ST3A1Q9Y663 406 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 CSNK1G3Q9Y6M4 447 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 TRPM6Q9BX84 2022 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 CCDC187A0A096LP49 1063 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 A0A0D9SEW6 157 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 A0A1W2PNU3 283 aaPredicted RBP9.22□□□□□ -0.93
DHFR-202ENST00000504396 BICDL2A1A5D9 508 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 RNF103O00237 685 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 OIP5O43482 229 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 DAB1O75553 588 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 TCEA3O75764 348 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 AFPP02771 609 aaKnown RBP9.22□□□□□ -0.93
DHFR-202ENST00000504396 ANXA6P08133 673 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 CD33P20138 364 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 ITGB7P26010 798 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 OR1E1P30953 314 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 SULT1E1P49888 294 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 RNASE9P60153 205 aaKnown RBP9.22□□□□□ -0.93
DHFR-202ENST00000504396 FGL2Q14314 439 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 ARHGAP44Q17R89 818 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 PERM1Q5SV97 790 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 RETSATQ6NUM9 610 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 ESRP1Q6NXG1 681 aaKnown RBP9.22□□□□□ -0.93
DHFR-202ENST00000504396 C11orf57Q6ZUT1 292 aaPredicted RBP9.22□□□□□ -0.93
DHFR-202ENST00000504396 SETD3Q86TU7 594 aaPredicted RBP9.22□□□□□ -0.93
DHFR-202ENST00000504396 ELOA2Q8IYF1 753 aaPredicted RBP9.22□□□□□ -0.93
DHFR-202ENST00000504396 C1orf131Q8NDD1 294 aaKnown RBP9.22□□□□□ -0.93
DHFR-202ENST00000504396 OR7D4Q8NG98 312 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 WDR48Q8TAF3 677 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 BTN2A2Q8WVV5 523 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 CPXM1Q96SM3 734 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 CCDC3Q9BQI4 270 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 SLC13A1Q9BZW2 595 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 TM6SF2Q9BZW4 377 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 TKTL2Q9H0I9 626 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 WDCPQ9H6R7 721 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 ATP13A1Q9HD20 1204 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 GPR27Q9NS67 375 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 RRN3Q9NYV6 651 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 MPP6Q9NZW5 540 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 SIRPGQ9P1W8 387 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 GULP1Q9UBP9 304 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 KLF15Q9UIH9 416 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 SALL4Q9UJQ4 1053 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 PAXBP1Q9Y5B6 917 aa9.22□□□□□ -0.93
DHFR-202ENST00000504396 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.22□□□□□ -0.936e-15■□□□□ 11.3
DHFR-202ENST00000504396 SNX10Q9Y5X0 201 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms