RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 CNTN6Q9UQ52 1028 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 BCLAF3A2AJT9 711 aaKnown RBP7.69□□□□□ -1.18
NEDD9-208ENST00000504387 H3BMM5 538 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 FAM189A1O60320 539 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 SYNCRIPO60506 623 aaKnown RBP7.69□□□□□ -1.18
NEDD9-208ENST00000504387 HUS1O60921 280 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 SLC4A1P02730 911 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 CYP2C9P11712 490 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 UBA1P22314 1058 aaKnown RBP7.69□□□□□ -1.18
NEDD9-208ENST00000504387 JAK1P23458 1154 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 ARL4AP40617 200 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 NAMPTP43490 491 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 CLDN10P78369 228 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 NFATC3Q12968 1075 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 KCNJ8Q15842 424 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 ADRM1Q16186 407 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 SOWAHAQ2M3V2 549 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 BOLA3Q53S33 107 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 CCDC81Q6ZN84 652 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 EPHX4Q8IUS5 362 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 CEP97Q8IW35 865 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 DDIASQ8IXT1 998 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 LSMEM2Q8N112 164 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 FLAD1Q8NFF5 587 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 OR10Q1Q8NGQ4 319 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 SPATA22Q8NHS9 363 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 VPS33AQ96AX1 596 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 ASB9Q96DX5 294 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 CDHR1Q96JP9 859 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 GLT1D1Q96MS3 346 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 RBBP8Q99708 897 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 EHD1Q9H4M9 534 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 MINDY3Q9H8M7 445 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 CACNA2D2Q9NY47 1150 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 BFARQ9NZS9 450 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 LINC00854A0A1B0GVQ3 168 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 LRRC14BA6NHZ5 514 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 PPEF2O14830 753 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 OGTO15294 1046 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 KPNA6O60684 536 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 SRP72O76094 671 aaKnown RBP7.69□□□□□ -1.18
NEDD9-208ENST00000504387 MYO1DO94832 1006 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 SUPT7LO94864 414 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 ITGB6P18564 788 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 FSHRP23945 695 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 ADSLP30566 484 aaPredicted RBP7.69□□□□□ -1.18
NEDD9-208ENST00000504387 TGFBR1P36897 503 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 TXNL4AP83876 142 aaKnown RBP7.69□□□□□ -1.18
NEDD9-208ENST00000504387 RPS6KA2Q15349 733 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 TAZQ16635 292 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 CCDC153Q494R4 210 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 RABL3Q5HYI8 236 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 NOMO2Q5JPE7 1267 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 LIPMQ5VYY2 423 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 FAM160B1Q5W0V3 765 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 CMTR2Q8IYT2 770 aaKnown RBP7.69□□□□□ -1.18
NEDD9-208ENST00000504387 HS3ST5Q8IZT8 346 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 CADM3Q8N126 398 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 TFAP2CQ92754 450 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 OTUD5Q96G74 571 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 RNF145Q96MT1 663 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 TMEM74Q96NL1 305 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 MUS81Q96NY9 551 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 TBCBQ99426 244 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 HNRNPABQ99729 332 aaKnown RBP7.69□□□□□ -1.18
NEDD9-208ENST00000504387 R3HDMLQ9H3Y0 253 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 DPEP3Q9H4B8 488 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 ZNF408Q9H9D4 720 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 AS3MTQ9HBK9 375 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 SPAG4Q9NPE6 437 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 CROTQ9UKG9 612 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 BTRCQ9Y297 605 aa7.69□□□□□ -1.18
NEDD9-208ENST00000504387 FAM32AQ9Y421 112 aaKnown RBP7.69□□□□□ -1.18
NEDD9-208ENST00000504387 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.68□□□□□ -1.18
NEDD9-208ENST00000504387 A0A0A0MRY4 1105 aa7.68□□□□□ -1.18
NEDD9-208ENST00000504387 A0A1W2PQ67 120 aa7.68□□□□□ -1.18
NEDD9-208ENST00000504387 DHRS12A0PJE2 317 aa7.68□□□□□ -1.18
NEDD9-208ENST00000504387 DYTNA2CJ06 578 aa7.68□□□□□ -1.18
NEDD9-208ENST00000504387 H0Y858 1186 aa7.68□□□□□ -1.18
NEDD9-208ENST00000504387 SDHDO14521 159 aa7.68□□□□□ -1.18
NEDD9-208ENST00000504387 AXIN1O15169 862 aa7.68□□□□□ -1.18
NEDD9-208ENST00000504387 ZBTB24O43167 697 aaPredicted RBP7.68□□□□□ -1.18
NEDD9-208ENST00000504387 CNOT3O75175 753 aaKnown RBP7.68□□□□□ -1.18
NEDD9-208ENST00000504387 BAIAP3O94812 1187 aa7.68□□□□□ -1.18
NEDD9-208ENST00000504387 PRKAA1Q13131 559 aa7.68□□□□□ -1.18
NEDD9-208ENST00000504387 LAPTM5Q13571 262 aa7.68□□□□□ -1.18
NEDD9-208ENST00000504387 FAM83EQ2M2I3 478 aa7.68□□□□□ -1.18
NEDD9-208ENST00000504387 FAM214AQ32MH5 1076 aa7.68□□□□□ -1.18
NEDD9-208ENST00000504387 TMEM236Q5W0B7 351 aa7.68□□□□□ -1.18
NEDD9-208ENST00000504387 NCBP2-AS2Q69YL0 99 aa7.68□□□□□ -1.18
NEDD9-208ENST00000504387 BORAQ6PGQ7 559 aa7.68□□□□□ -1.18
NEDD9-208ENST00000504387 TBPL2Q6SJ96 375 aa7.68□□□□□ -1.18
NEDD9-208ENST00000504387 TIFABQ6ZNK6 161 aa7.68□□□□□ -1.18
NEDD9-208ENST00000504387 OTOP3Q7RTS5 596 aa7.68□□□□□ -1.18
NEDD9-208ENST00000504387 RALGPS2Q86X27 583 aaPredicted RBP7.68□□□□□ -1.18
NEDD9-208ENST00000504387 KIAA2013Q8IYS2 634 aa7.68□□□□□ -1.18
NEDD9-208ENST00000504387 SIX5Q8N196 739 aa7.68□□□□□ -1.18
NEDD9-208ENST00000504387 CLEC4FQ8N1N0 589 aa7.68□□□□□ -1.18
NEDD9-208ENST00000504387 DHRSXQ8N5I4 330 aa7.68□□□□□ -1.18
NEDD9-208ENST00000504387 TXNDC5Q8NBS9 432 aaKnown RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms