RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 ITGAVP06756 1048 aa13.4□□□□□ -0.26
PDLIM7-212ENST00000504380 C5AR1P21730 350 aa13.4□□□□□ -0.26
PDLIM7-212ENST00000504380 PSMB4P28070 264 aa13.4□□□□□ -0.26
PDLIM7-212ENST00000504380 PAFAH1B1P43034 410 aa13.4□□□□□ -0.26
PDLIM7-212ENST00000504380 TPMTP51580 245 aa13.4□□□□□ -0.26
PDLIM7-212ENST00000504380 AP1S1P61966 158 aa13.4□□□□□ -0.26
PDLIM7-212ENST00000504380 BCL2L1Q07817 233 aa13.4□□□□□ -0.26
PDLIM7-212ENST00000504380 TRIP13Q15645 432 aaPredicted RBP13.4□□□□□ -0.26
PDLIM7-212ENST00000504380 PCSK7Q16549 785 aa13.4□□□□□ -0.26
PDLIM7-212ENST00000504380 ZNF805Q5CZA5 627 aa13.4□□□□□ -0.26
PDLIM7-212ENST00000504380 FAM46CQ5VWP2 391 aa13.4□□□□□ -0.26
PDLIM7-212ENST00000504380 PARS2Q7L3T8 475 aaKnown RBP13.4□□□□□ -0.26
PDLIM7-212ENST00000504380 GSTA5Q7RTV2 222 aa13.4□□□□□ -0.26
PDLIM7-212ENST00000504380 ERMP1Q7Z2K6 904 aa13.4□□□□□ -0.26
PDLIM7-212ENST00000504380 WDR5BQ86VZ2 330 aa13.4□□□□□ -0.26
PDLIM7-212ENST00000504380 DEFB119Q8N690 84 aa13.4□□□□□ -0.26
PDLIM7-212ENST00000504380 ATOH1Q92858 354 aaPredicted RBP13.4□□□□□ -0.26
PDLIM7-212ENST00000504380 IMP4Q96G21 291 aaKnown RBP13.4□□□□□ -0.26
PDLIM7-212ENST00000504380 OMDQ99983 421 aa13.4□□□□□ -0.26
PDLIM7-212ENST00000504380 GORASP1Q9BQQ3 440 aa13.4□□□□□ -0.26
PDLIM7-212ENST00000504380 CPEB1Q9BZB8 566 aaKnown RBP13.4□□□□□ -0.26
PDLIM7-212ENST00000504380 DDX47Q9H0S4 455 aaKnown RBP13.4□□□□□ -0.26
PDLIM7-212ENST00000504380 SLC25A51Q9H1U9 297 aa13.4□□□□□ -0.26
PDLIM7-212ENST00000504380 SUV39H2Q9H5I1 410 aa13.4□□□□□ -0.26
PDLIM7-212ENST00000504380 ATP13A3Q9H7F0 1226 aa13.4□□□□□ -0.26
PDLIM7-212ENST00000504380 ITM2CQ9NQX7 267 aa13.4□□□□□ -0.26
PDLIM7-212ENST00000504380 USP36Q9P275 1121 aaKnown RBP13.4□□□□□ -0.26
PDLIM7-212ENST00000504380 AMACRQ9UHK6 382 aa13.4□□□□□ -0.26
PDLIM7-212ENST00000504380 TRHDEQ9UKU6 1024 aa13.4□□□□□ -0.26
PDLIM7-212ENST00000504380 CHKBQ9Y259 395 aa13.4□□□□□ -0.26
PDLIM7-212ENST00000504380 DRG1Q9Y295 367 aaKnown RBP13.4□□□□□ -0.26
PDLIM7-212ENST00000504380 RAI2Q9Y5P3 530 aa13.4□□□□□ -0.26
PDLIM7-212ENST00000504380 NUMA1Q14980 2115 aa13.39□□□□□ -0.27
PDLIM7-212ENST00000504380 CFAP69A5D8W1 941 aa13.39□□□□□ -0.27
PDLIM7-212ENST00000504380 PRR23AA6NEV1 266 aa13.39□□□□□ -0.27
PDLIM7-212ENST00000504380 C16orf96A6NNT2 1141 aa13.39□□□□□ -0.27
PDLIM7-212ENST00000504380 ESPNB1AK53 854 aa13.39□□□□□ -0.27
PDLIM7-212ENST00000504380 KIF2AO00139 706 aaPredicted RBP13.39□□□□□ -0.27
PDLIM7-212ENST00000504380 TRAFD1O14545 582 aaPredicted RBP13.39□□□□□ -0.27
PDLIM7-212ENST00000504380 HRO43593 1189 aa13.39□□□□□ -0.27
PDLIM7-212ENST00000504380 PMPCBO75439 489 aa13.39□□□□□ -0.27
PDLIM7-212ENST00000504380 STK10O94804 968 aaKnown RBP13.39□□□□□ -0.27
PDLIM7-212ENST00000504380 PDHA1P08559 390 aa13.39□□□□□ -0.27
PDLIM7-212ENST00000504380 TIMP2P16035 220 aa13.39□□□□□ -0.27
PDLIM7-212ENST00000504380 BCKDHBP21953 392 aa13.39□□□□□ -0.27
PDLIM7-212ENST00000504380 SERPINA4P29622 427 aa13.39□□□□□ -0.27
PDLIM7-212ENST00000504380 HOXA6P31267 233 aa13.39□□□□□ -0.27
PDLIM7-212ENST00000504380 RPL22P35268 128 aaKnown RBP13.39□□□□□ -0.27
PDLIM7-212ENST00000504380 P2RY2P41231 377 aa13.39□□□□□ -0.27
PDLIM7-212ENST00000504380 ABL2P42684 1182 aa13.39□□□□□ -0.27
PDLIM7-212ENST00000504380 NUBP1P53384 320 aa13.39□□□□□ -0.27
PDLIM7-212ENST00000504380 TERF1P54274 439 aa13.39□□□□□ -0.27
PDLIM7-212ENST00000504380 MRPS25P82663 173 aaKnown RBP13.39□□□□□ -0.27
PDLIM7-212ENST00000504380 C2orf54Q08AI8 447 aa13.39□□□□□ -0.27
PDLIM7-212ENST00000504380 CYP1B1Q16678 543 aa13.39□□□□□ -0.27
PDLIM7-212ENST00000504380 MAP7D1Q3KQU3 841 aa13.39□□□□□ -0.27
PDLIM7-212ENST00000504380 SYCP2LQ5T4T6 812 aa13.39□□□□□ -0.27
PDLIM7-212ENST00000504380 ALG1LQ6GMV1 187 aa13.39□□□□□ -0.27
PDLIM7-212ENST00000504380 DRICH1Q6PGQ1 229 aaPredicted RBP13.39□□□□□ -0.27
PDLIM7-212ENST00000504380 CCDC137Q6PK04 289 aaKnown RBP13.39□□□□□ -0.27
PDLIM7-212ENST00000504380 LONP2Q86WA8 852 aa13.39□□□□□ -0.27
PDLIM7-212ENST00000504380 PAF1Q8N7H5 531 aa13.39□□□□□ -0.27
PDLIM7-212ENST00000504380 KIF18AQ8NI77 898 aa13.39□□□□□ -0.27
PDLIM7-212ENST00000504380 OXNAD1Q96HP4 312 aaPredicted RBP13.39□□□□□ -0.27
PDLIM7-212ENST00000504380 TUBGCP5Q96RT8 1024 aa13.39□□□□□ -0.27
PDLIM7-212ENST00000504380 VAT1Q99536 393 aa13.39□□□□□ -0.27
PDLIM7-212ENST00000504380 FERMT1Q9BQL6 677 aa13.39□□□□□ -0.27
PDLIM7-212ENST00000504380 GBA3Q9H227 469 aa13.39□□□□□ -0.27
PDLIM7-212ENST00000504380 DYRK4Q9NR20 520 aa13.39□□□□□ -0.27
PDLIM7-212ENST00000504380 HOMER3Q9NSC5 361 aa13.39□□□□□ -0.27
PDLIM7-212ENST00000504380 MBD1Q9UIS9 605 aaPredicted RBP13.39□□□□□ -0.27
PDLIM7-212ENST00000504380 CDC23Q9UJX2 597 aa13.39□□□□□ -0.27
PDLIM7-212ENST00000504380 ITM2BQ9Y287 266 aa13.39□□□□□ -0.27
PDLIM7-212ENST00000504380 IGHV1OR15-9A0A0B4J2B8 117 aa13.38□□□□□ -0.27
PDLIM7-212ENST00000504380 GOLGA6L10A0A0M3HER8 536 aa13.38□□□□□ -0.27
PDLIM7-212ENST00000504380 A0A0U1RQS6 177 aa13.38□□□□□ -0.27
PDLIM7-212ENST00000504380 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.38□□□□□ -0.27
PDLIM7-212ENST00000504380 FAM47DPA6NHR8 397 aa13.38□□□□□ -0.27
PDLIM7-212ENST00000504380 A8MX80 341 aa13.38□□□□□ -0.27
PDLIM7-212ENST00000504380 GCATO75600 419 aa13.38□□□□□ -0.27
PDLIM7-212ENST00000504380 SERPINF2P08697 491 aa13.38□□□□□ -0.27
PDLIM7-212ENST00000504380 CTPS1P17812 591 aa13.38□□□□□ -0.27
PDLIM7-212ENST00000504380 ITGB7P26010 798 aa13.38□□□□□ -0.27
PDLIM7-212ENST00000504380 STIP1P31948 543 aaKnown RBP13.38□□□□□ -0.27
PDLIM7-212ENST00000504380 ACSL1P33121 698 aa13.38□□□□□ -0.27
PDLIM7-212ENST00000504380 MAPK8P45983 427 aa13.38□□□□□ -0.27
PDLIM7-212ENST00000504380 VPS41P49754 854 aa13.38□□□□□ -0.27
PDLIM7-212ENST00000504380 ZBTB16Q05516 673 aa13.38□□□□□ -0.27
PDLIM7-212ENST00000504380 OLIG2Q13516 323 aa13.38□□□□□ -0.27
PDLIM7-212ENST00000504380 SPARCL1Q14515 664 aa13.38□□□□□ -0.27
PDLIM7-212ENST00000504380 TTC31Q49AM3 519 aaPredicted RBP13.38□□□□□ -0.27
PDLIM7-212ENST00000504380 PIP5KL1Q5T9C9 394 aa13.38□□□□□ -0.27
PDLIM7-212ENST00000504380 AGBL4Q5VU57 503 aa13.38□□□□□ -0.27
PDLIM7-212ENST00000504380 KDELC1Q6UW63 502 aa13.38□□□□□ -0.27
PDLIM7-212ENST00000504380 ARHGEF18Q6ZSZ5 1173 aa13.38□□□□□ -0.27
PDLIM7-212ENST00000504380 ERN2Q76MJ5 926 aaKnown RBP13.38□□□□□ -0.27
PDLIM7-212ENST00000504380 C12orf50Q8NA57 414 aaPredicted RBP13.38□□□□□ -0.27
PDLIM7-212ENST00000504380 ATL2Q8NHH9 583 aa13.38□□□□□ -0.27
PDLIM7-212ENST00000504380 TADA1Q96BN2 335 aa13.38□□□□□ -0.27
PDLIM7-212ENST00000504380 RTP4Q96DX8 246 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms