RNA–Protein interactions for RNA: ENST00000504152.5

DDR1-252, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-252ENST00000504152 PRR23BQ6ZRT6 265 aa18.38■□□□□ 0.53
DDR1-252ENST00000504152 LPCAT2Q7L5N7 544 aa18.38■□□□□ 0.53
DDR1-252ENST00000504152 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.38■□□□□ 0.53
DDR1-252ENST00000504152 SLC35B2Q8TB61 432 aa18.38■□□□□ 0.53
DDR1-252ENST00000504152 RAB7BQ96AH8 199 aa18.38■□□□□ 0.53
DDR1-252ENST00000504152 VOPP1Q96AW1 172 aa18.38■□□□□ 0.53
DDR1-252ENST00000504152 ZNF419Q96HQ0 510 aaPredicted RBP18.38■□□□□ 0.53
DDR1-252ENST00000504152 MS4A14Q96JA4 679 aa18.38■□□□□ 0.53
DDR1-252ENST00000504152 ZC3H10Q96K80 434 aaKnown RBP18.38■□□□□ 0.53
DDR1-252ENST00000504152 GPR174Q9BXC1 333 aa18.38■□□□□ 0.53
DDR1-252ENST00000504152 SLC25A51Q9H1U9 297 aa18.38■□□□□ 0.53
DDR1-252ENST00000504152 KDM4CQ9H3R0 1056 aa18.38■□□□□ 0.53
DDR1-252ENST00000504152 C10orf88Q9H8K7 445 aa18.38■□□□□ 0.53
DDR1-252ENST00000504152 USP29Q9HBJ7 922 aa18.38■□□□□ 0.53
DDR1-252ENST00000504152 GLOD4Q9HC38 313 aa18.38■□□□□ 0.53
DDR1-252ENST00000504152 KLHL8Q9P2G9 620 aaPredicted RBP18.38■□□□□ 0.53
DDR1-252ENST00000504152 SERGEFQ9UGK8 458 aa18.38■□□□□ 0.53
DDR1-252ENST00000504152 DNPEPQ9ULA0 475 aa18.38■□□□□ 0.53
DDR1-252ENST00000504152 RAB23Q9ULC3 237 aa18.38■□□□□ 0.53
DDR1-252ENST00000504152 PCDHGC4Q9Y5F7 938 aa18.38■□□□□ 0.53
DDR1-252ENST00000504152 SAR1BQ9Y6B6 198 aa18.38■□□□□ 0.53
DDR1-252ENST00000504152 FANCMQ8IYD8 2048 aa18.37■□□□□ 0.53
DDR1-252ENST00000504152 TBC1D3DA0A087WVF3 549 aa18.37■□□□□ 0.53
DDR1-252ENST00000504152 TBC1D3IA0A087WXS9 549 aa18.37■□□□□ 0.53
DDR1-252ENST00000504152 TBC1D3EA0A087X179 549 aa18.37■□□□□ 0.53
DDR1-252ENST00000504152 TBC1D3KA0A087X1G2 549 aa18.37■□□□□ 0.53
DDR1-252ENST00000504152 CFAP69A5D8W1 941 aa18.37■□□□□ 0.53
DDR1-252ENST00000504152 TBC1D3FA6NER0 549 aaPredicted RBP18.37■□□□□ 0.53
DDR1-252ENST00000504152 LRRC72A6NJI9 287 aa18.37■□□□□ 0.53
DDR1-252ENST00000504152 TBC1D3LB9A6J9 549 aa18.37■□□□□ 0.53
DDR1-252ENST00000504152 PLK4O00444 970 aa18.37■□□□□ 0.53
DDR1-252ENST00000504152 LIASO43766 372 aa18.37■□□□□ 0.53
DDR1-252ENST00000504152 SOCS5O75159 536 aa18.37■□□□□ 0.53
DDR1-252ENST00000504152 GJB3O75712 270 aa18.37■□□□□ 0.53
DDR1-252ENST00000504152 SEMA4FO95754 770 aa18.37■□□□□ 0.53
DDR1-252ENST00000504152 TBC1D3HP0C7X1 549 aa18.37■□□□□ 0.53
DDR1-252ENST00000504152 BCKDHBP21953 392 aa18.37■□□□□ 0.53
DDR1-252ENST00000504152 XPAP23025 273 aaPredicted RBP18.37■□□□□ 0.53
DDR1-252ENST00000504152 CASQ1P31415 396 aa18.37■□□□□ 0.53
DDR1-252ENST00000504152 SUOXP51687 545 aa18.37■□□□□ 0.53
DDR1-252ENST00000504152 DSC2Q02487 901 aa18.37■□□□□ 0.53
DDR1-252ENST00000504152 TBC1D3GQ6DHY5 549 aa18.37■□□□□ 0.53
DDR1-252ENST00000504152 TBC1D3CQ6IPX1 549 aa18.37■□□□□ 0.53
DDR1-252ENST00000504152 BRAT1Q6PJG6 821 aa18.37■□□□□ 0.53
DDR1-252ENST00000504152 TBC1D3Q8IZP1 549 aaPredicted RBP18.37■□□□□ 0.53
DDR1-252ENST00000504152 ZNF567Q8N184 647 aa18.37■□□□□ 0.53
DDR1-252ENST00000504152 CADM4Q8NFZ8 388 aa18.37■□□□□ 0.53
DDR1-252ENST00000504152 ARRDC2Q8TBH0 407 aa18.37■□□□□ 0.53
DDR1-252ENST00000504152 ACTRT1Q8TDG2 376 aa18.37■□□□□ 0.53
DDR1-252ENST00000504152 COG1Q8WTW3 980 aa18.37■□□□□ 0.53
DDR1-252ENST00000504152 C1orf54Q8WWF1 131 aa18.37■□□□□ 0.53
DDR1-252ENST00000504152 FAM131CQ96AQ9 280 aa18.37■□□□□ 0.53
DDR1-252ENST00000504152 PHOX2BQ99453 314 aa18.37■□□□□ 0.53
DDR1-252ENST00000504152 PCED1AQ9H1Q7 454 aa18.37■□□□□ 0.53
DDR1-252ENST00000504152 DUSP15Q9H1R2 295 aaPredicted RBP18.37■□□□□ 0.53
DDR1-252ENST00000504152 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.37■□□□□ 0.53
DDR1-252ENST00000504152 ZNF148Q9UQR1 794 aa18.37■□□□□ 0.53
DDR1-252ENST00000504152 DRG1Q9Y295 367 aaKnown RBP18.37■□□□□ 0.53
DDR1-252ENST00000504152 PLXND1Q9Y4D7 1925 aa18.37■□□□□ 0.53
DDR1-252ENST00000504152 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.36■□□□□ 0.53
DDR1-252ENST00000504152 FAM47DPA6NHR8 397 aa18.36■□□□□ 0.53
DDR1-252ENST00000504152 PGRMC1O00264 195 aaKnown RBP18.36■□□□□ 0.53
DDR1-252ENST00000504152 ADRB3P13945 408 aa18.36■□□□□ 0.53
DDR1-252ENST00000504152 TIMP2P16035 220 aa18.36■□□□□ 0.53
DDR1-252ENST00000504152 CA4P22748 312 aa18.36■□□□□ 0.53
DDR1-252ENST00000504152 NBL1P41271 181 aa18.36■□□□□ 0.53
DDR1-252ENST00000504152 NIPAL4Q0D2K0 466 aa18.36■□□□□ 0.53
DDR1-252ENST00000504152 SNX1Q13596 522 aa18.36■□□□□ 0.53
DDR1-252ENST00000504152 PLK5Q496M5 336 aa18.36■□□□□ 0.53
DDR1-252ENST00000504152 PIP5KL1Q5T9C9 394 aa18.36■□□□□ 0.53
DDR1-252ENST00000504152 AGBL4Q5VU57 503 aa18.36■□□□□ 0.53
DDR1-252ENST00000504152 SYT10Q6XYQ8 523 aa18.36■□□□□ 0.53
DDR1-252ENST00000504152 PARS2Q7L3T8 475 aaKnown RBP18.36■□□□□ 0.53
DDR1-252ENST00000504152 TMEFF1Q8IYR6 380 aa18.36■□□□□ 0.53
DDR1-252ENST00000504152 OR2T34Q8NGX1 318 aa18.36■□□□□ 0.53
DDR1-252ENST00000504152 PDCD6IPQ8WUM4 868 aaKnown RBP18.36■□□□□ 0.53
DDR1-252ENST00000504152 ATG4AQ8WYN0 398 aa18.36■□□□□ 0.53
DDR1-252ENST00000504152 FOXJ1Q92949 421 aa18.36■□□□□ 0.53
DDR1-252ENST00000504152 NKD2Q969F2 451 aaPredicted RBP18.36■□□□□ 0.53
DDR1-252ENST00000504152 NSMCE3Q96MG7 304 aa18.36■□□□□ 0.53
DDR1-252ENST00000504152 EPC1Q9H2F5 836 aa18.36■□□□□ 0.53
DDR1-252ENST00000504152 RAI2Q9Y5P3 530 aa18.36■□□□□ 0.53
DDR1-252ENST00000504152 ANKRD36A6QL64 1941 aa18.35■□□□□ 0.53
DDR1-252ENST00000504152 C5orf60A6NFR6 353 aa18.35■□□□□ 0.53
DDR1-252ENST00000504152 TRAFD1O14545 582 aaPredicted RBP18.35■□□□□ 0.53
DDR1-252ENST00000504152 ZNF185O15231 689 aa18.35■□□□□ 0.53
DDR1-252ENST00000504152 HTRA2O43464 458 aaPredicted RBP18.35■□□□□ 0.53
DDR1-252ENST00000504152 PLRG1O43660 514 aaKnown RBP18.35■□□□□ 0.53
DDR1-252ENST00000504152 NFKBIAP25963 317 aa18.35■□□□□ 0.53
DDR1-252ENST00000504152 CD86P42081 329 aa18.35■□□□□ 0.53
DDR1-252ENST00000504152 ADPRHP54922 357 aa18.35■□□□□ 0.53
DDR1-252ENST00000504152 SIX1Q15475 284 aaPredicted RBP18.35■□□□□ 0.53
DDR1-252ENST00000504152 UGP2Q16851 508 aa18.35■□□□□ 0.53
DDR1-252ENST00000504152 ANKRD20A2Q5SQ80 823 aa18.35■□□□□ 0.53
DDR1-252ENST00000504152 ARMC12Q5T9G4 340 aa18.35■□□□□ 0.53
DDR1-252ENST00000504152 ANKRD20A1Q5TYW2 823 aa18.35■□□□□ 0.53
DDR1-252ENST00000504152 ANKRD20A3Q5VUR7 823 aa18.35■□□□□ 0.53
DDR1-252ENST00000504152 ITPRIPL1Q6GPH6 555 aa18.35■□□□□ 0.53
DDR1-252ENST00000504152 NEK5Q6P3R8 708 aa18.35■□□□□ 0.53
DDR1-252ENST00000504152 DRICH1Q6PGQ1 229 aaPredicted RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms