RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 FBXO5Q9UKT4 447 aa21.54■■□□□ 1.04
UBE2D3-216ENST00000503742 ANKRD6Q9Y2G4 727 aa21.54■■□□□ 1.04
UBE2D3-216ENST00000503742 HGSO14964 777 aaPredicted RBP21.53■■□□□ 1.04
UBE2D3-216ENST00000503742 LDB2O43679 373 aa21.53■■□□□ 1.04
UBE2D3-216ENST00000503742 FGF1P05230 155 aa21.53■■□□□ 1.04
UBE2D3-216ENST00000503742 HSPA8P11142 646 aaKnown RBP21.53■■□□□ 1.04
UBE2D3-216ENST00000503742 KCNA4P22459 653 aa21.53■■□□□ 1.04
UBE2D3-216ENST00000503742 ZNF470Q6ECI4 717 aa21.53■■□□□ 1.04
UBE2D3-216ENST00000503742 ZCCHC23Q6ZST2 131 aa21.53■■□□□ 1.04
UBE2D3-216ENST00000503742 MFSD6LQ8IWD5 586 aa21.53■■□□□ 1.04
UBE2D3-216ENST00000503742 IFT43Q96FT9 208 aa21.53■■□□□ 1.04
UBE2D3-216ENST00000503742 NSMCE3Q96MG7 304 aa21.53■■□□□ 1.04
UBE2D3-216ENST00000503742 C1QTNF1Q9BXJ1 281 aa21.53■■□□□ 1.04
UBE2D3-216ENST00000503742 LRRC3Q9BY71 257 aa21.53■■□□□ 1.04
UBE2D3-216ENST00000503742 THAP1Q9NVV9 213 aa21.53■■□□□ 1.04
UBE2D3-216ENST00000503742 A0A0G2JND7 137 aa21.52■■□□□ 1.04
UBE2D3-216ENST00000503742 ZBBXA8MT70 800 aa21.52■■□□□ 1.04
UBE2D3-216ENST00000503742 HDCP19113 662 aa21.52■■□□□ 1.04
UBE2D3-216ENST00000503742 RGRP47804 291 aa21.52■■□□□ 1.04
UBE2D3-216ENST00000503742 ARFIP2P53365 341 aa21.52■■□□□ 1.04
UBE2D3-216ENST00000503742 USP10Q14694 798 aaKnown RBP21.52■■□□□ 1.04
UBE2D3-216ENST00000503742 SPDYAQ5MJ70 313 aa21.52■■□□□ 1.04
UBE2D3-216ENST00000503742 ZNF783Q6ZMS7 281 aa21.52■■□□□ 1.04
UBE2D3-216ENST00000503742 GAREM2Q75VX8 874 aa21.52■■□□□ 1.04
UBE2D3-216ENST00000503742 TMC8Q8IU68 726 aa21.52■■□□□ 1.04
UBE2D3-216ENST00000503742 C10orf107Q8IVU9 208 aa21.52■■□□□ 1.04
UBE2D3-216ENST00000503742 CINPQ9BW66 212 aaPredicted RBP21.52■■□□□ 1.04
UBE2D3-216ENST00000503742 ECT2Q9H8V3 914 aa21.52■■□□□ 1.04
UBE2D3-216ENST00000503742 H0YHG0 523 aa21.52■■□□□ 1.04
UBE2D3-216ENST00000503742 SLC7A4O43246 635 aa21.52■■□□□ 1.04
UBE2D3-216ENST00000503742 DNAJB1P25685 340 aa21.52■■□□□ 1.04
UBE2D3-216ENST00000503742 SKIV2L2P42285 1042 aaKnown RBP21.52■■□□□ 1.04
UBE2D3-216ENST00000503742 CD151P48509 253 aa21.52■■□□□ 1.04
UBE2D3-216ENST00000503742 CYTH1Q15438 398 aa21.52■■□□□ 1.04
UBE2D3-216ENST00000503742 RNF219Q5W0B1 726 aaPredicted RBP21.52■■□□□ 1.04
UBE2D3-216ENST00000503742 FAM217AQ8IXS0 508 aa21.52■■□□□ 1.04
UBE2D3-216ENST00000503742 KLHL23Q8NBE8 558 aa21.52■■□□□ 1.04
UBE2D3-216ENST00000503742 OR6Y1Q8NGX8 325 aa21.52■■□□□ 1.04
UBE2D3-216ENST00000503742 CALML6Q8TD86 181 aa21.52■■□□□ 1.04
UBE2D3-216ENST00000503742 PEX13Q92968 403 aa21.52■■□□□ 1.04
UBE2D3-216ENST00000503742 TMEM120AQ9BXJ8 343 aa21.52■■□□□ 1.04
UBE2D3-216ENST00000503742 NOD2Q9HC29 1040 aa21.52■■□□□ 1.04
UBE2D3-216ENST00000503742 CPQQ9Y646 472 aa21.52■■□□□ 1.04
UBE2D3-216ENST00000503742 FAM95CA0A1B0GW59 222 aa21.51■■□□□ 1.03
UBE2D3-216ENST00000503742 SLC35E2BP0CK96 405 aa21.51■■□□□ 1.03
UBE2D3-216ENST00000503742 CPA3P15088 417 aa21.51■■□□□ 1.03
UBE2D3-216ENST00000503742 GABRR2P28476 465 aa21.51■■□□□ 1.03
UBE2D3-216ENST00000503742 ACVR1Q04771 509 aa21.51■■□□□ 1.03
UBE2D3-216ENST00000503742 GALNT7Q86SF2 657 aa21.51■■□□□ 1.03
UBE2D3-216ENST00000503742 LCA5Q86VQ0 697 aa21.51■■□□□ 1.03
UBE2D3-216ENST00000503742 SLC41A1Q8IVJ1 513 aa21.51■■□□□ 1.03
UBE2D3-216ENST00000503742 TLK1Q9UKI8 766 aa21.51■■□□□ 1.03
UBE2D3-216ENST00000503742 NUMBLQ9Y6R0 609 aa21.51■■□□□ 1.03
UBE2D3-216ENST00000503742 INSIG1O15503 277 aa21.5■■□□□ 1.03
UBE2D3-216ENST00000503742 HAUS5O94927 633 aa21.5■■□□□ 1.03
UBE2D3-216ENST00000503742 CXCL14O95715 111 aa21.5■■□□□ 1.03
UBE2D3-216ENST00000503742 NDST3O95803 873 aa21.5■■□□□ 1.03
UBE2D3-216ENST00000503742 CD160O95971 181 aa21.5■■□□□ 1.03
UBE2D3-216ENST00000503742 C1RP00736 705 aa21.5■■□□□ 1.03
UBE2D3-216ENST00000503742 FGBP02675 491 aa21.5■■□□□ 1.03
UBE2D3-216ENST00000503742 SERPINE1P05121 402 aa21.5■■□□□ 1.03
UBE2D3-216ENST00000503742 LEPRP48357 1165 aaKnown RBP21.5■■□□□ 1.03
UBE2D3-216ENST00000503742 ARF5P84085 180 aa21.5■■□□□ 1.03
UBE2D3-216ENST00000503742 CRLF3Q8IUI8 442 aa21.5■■□□□ 1.03
UBE2D3-216ENST00000503742 PPP1R14CQ8TAE6 165 aa21.5■■□□□ 1.03
UBE2D3-216ENST00000503742 MFSD1Q9H3U5 465 aa21.5■■□□□ 1.03
UBE2D3-216ENST00000503742 NMRAL1Q9HBL8 299 aa21.5■■□□□ 1.03
UBE2D3-216ENST00000503742 KCNK4Q9NYG8 393 aa21.5■■□□□ 1.03
UBE2D3-216ENST00000503742 G3V2L1 256 aa21.5■■□□□ 1.03
UBE2D3-216ENST00000503742 CBX4O00257 560 aa21.5■■□□□ 1.03
UBE2D3-216ENST00000503742 PHGDHO43175 533 aaKnown RBP21.5■■□□□ 1.03
UBE2D3-216ENST00000503742 TBL1XO60907 577 aa21.5■■□□□ 1.03
UBE2D3-216ENST00000503742 ZMPSTE24O75844 475 aa21.5■■□□□ 1.03
UBE2D3-216ENST00000503742 COL6A2P12110 1019 aa21.5■■□□□ 1.03
UBE2D3-216ENST00000503742 GRK2P25098 689 aa21.5■■□□□ 1.03
UBE2D3-216ENST00000503742 CA8P35219 290 aa21.5■■□□□ 1.03
UBE2D3-216ENST00000503742 ARSDP51689 593 aa21.5■■□□□ 1.03
UBE2D3-216ENST00000503742 RAB10P61026 200 aa21.5■■□□□ 1.03
UBE2D3-216ENST00000503742 CYP4F8P98187 520 aa21.5■■□□□ 1.03
UBE2D3-216ENST00000503742 SLC12A1Q13621 1099 aa21.5■■□□□ 1.03
UBE2D3-216ENST00000503742 LAMB3Q13751 1172 aa21.5■■□□□ 1.03
UBE2D3-216ENST00000503742 HSF5Q4G112 596 aaPredicted RBP21.5■■□□□ 1.03
UBE2D3-216ENST00000503742 FSCBQ5H9T9 825 aa21.5■■□□□ 1.03
UBE2D3-216ENST00000503742 RAPH1Q70E73 1250 aa21.5■■□□□ 1.03
UBE2D3-216ENST00000503742 MTDHQ86UE4 582 aaKnown RBP21.5■■□□□ 1.03
UBE2D3-216ENST00000503742 ARID3BQ8IVW6 561 aaPredicted RBP21.5■■□□□ 1.03
UBE2D3-216ENST00000503742 HS6ST3Q8IZP7 471 aa21.5■■□□□ 1.03
UBE2D3-216ENST00000503742 TNS4Q8IZW8 715 aa21.5■■□□□ 1.03
UBE2D3-216ENST00000503742 HJURPQ8NCD3 748 aaPredicted RBP21.5■■□□□ 1.03
UBE2D3-216ENST00000503742 BRSK1Q8TDC3 778 aa21.5■■□□□ 1.03
UBE2D3-216ENST00000503742 MUC3BQ9H195 1237 aa21.5■■□□□ 1.03
UBE2D3-216ENST00000503742 INSL6Q9Y581 213 aa21.5■■□□□ 1.03
UBE2D3-216ENST00000503742 KCTD3Q9Y597 815 aa21.5■■□□□ 1.03
UBE2D3-216ENST00000503742 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.49■■□□□ 1.03
UBE2D3-216ENST00000503742 AURKAO14965 403 aa21.49■■□□□ 1.03
UBE2D3-216ENST00000503742 ITM2AO43736 263 aa21.49■■□□□ 1.03
UBE2D3-216ENST00000503742 UNC5CO95185 931 aa21.49■■□□□ 1.03
UBE2D3-216ENST00000503742 MYL2P10916 166 aa21.49■■□□□ 1.03
UBE2D3-216ENST00000503742 CES1P23141 567 aa21.49■■□□□ 1.03
UBE2D3-216ENST00000503742 PPIGQ13427 754 aaKnown RBP eCLIP21.49■■□□□ 1.032e-7■□□□□ 10.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms