RNA–Protein interactions for RNA: ENST00000503564.5

POLR2J3-207, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 875 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-207ENST00000503564 VPS36Q86VN1 386 aa14.33□□□□□ -0.12
POLR2J3-207ENST00000503564 CCDC185Q8N715 623 aa14.33□□□□□ -0.12
POLR2J3-207ENST00000503564 TP53I13Q8NBR0 393 aaPredicted RBP14.33□□□□□ -0.12
POLR2J3-207ENST00000503564 JOSD2Q8TAC2 188 aa14.33□□□□□ -0.12
POLR2J3-207ENST00000503564 RXFP2Q8WXD0 754 aa14.33□□□□□ -0.12
POLR2J3-207ENST00000503564 TBC1D31Q96DN5 1066 aa14.33□□□□□ -0.12
POLR2J3-207ENST00000503564 ARHGEF26Q96DR7 871 aa14.33□□□□□ -0.12
POLR2J3-207ENST00000503564 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.33□□□□□ -0.12
POLR2J3-207ENST00000503564 STK33Q9BYT3 514 aa14.33□□□□□ -0.12
POLR2J3-207ENST00000503564 CLPBQ9H078 707 aa14.33□□□□□ -0.12
POLR2J3-207ENST00000503564 GANQ9H2C0 597 aa14.33□□□□□ -0.12
POLR2J3-207ENST00000503564 NOL6Q9H6R4 1146 aaKnown RBP14.33□□□□□ -0.12
POLR2J3-207ENST00000503564 CAPN8A6NHC0 703 aa14.32□□□□□ -0.12
POLR2J3-207ENST00000503564 RAMP2O60895 175 aa14.32□□□□□ -0.12
POLR2J3-207ENST00000503564 TMCC1O94876 653 aa14.32□□□□□ -0.12
POLR2J3-207ENST00000503564 GJB6O95452 261 aa14.32□□□□□ -0.12
POLR2J3-207ENST00000503564 CELA2BP08218 269 aaPredicted RBP14.32□□□□□ -0.12
POLR2J3-207ENST00000503564 CHRNB2P17787 502 aa14.32□□□□□ -0.12
POLR2J3-207ENST00000503564 RBMS1P29558 406 aaKnown RBP14.32□□□□□ -0.12
POLR2J3-207ENST00000503564 SDC4P31431 198 aa14.32□□□□□ -0.12
POLR2J3-207ENST00000503564 THOP1P52888 689 aa14.32□□□□□ -0.12
POLR2J3-207ENST00000503564 ADKP55263 362 aaKnown RBP14.32□□□□□ -0.12
POLR2J3-207ENST00000503564 HDAC4P56524 1084 aa14.32□□□□□ -0.12
POLR2J3-207ENST00000503564 YPEL5P62699 121 aa14.32□□□□□ -0.12
POLR2J3-207ENST00000503564 FMO1Q01740 532 aa14.32□□□□□ -0.12
POLR2J3-207ENST00000503564 C1orf61Q13536 156 aa14.32□□□□□ -0.12
POLR2J3-207ENST00000503564 GDPD4Q6W3E5 623 aa14.32□□□□□ -0.12
POLR2J3-207ENST00000503564 STRADAQ7RTN6 431 aa14.32□□□□□ -0.12
POLR2J3-207ENST00000503564 CLEC14AQ86T13 490 aa14.32□□□□□ -0.12
POLR2J3-207ENST00000503564 ZNF677Q86XU0 584 aa14.32□□□□□ -0.12
POLR2J3-207ENST00000503564 GPT2Q8TD30 523 aa14.32□□□□□ -0.12
POLR2J3-207ENST00000503564 CENPIQ92674 756 aaPredicted RBP14.32□□□□□ -0.12
POLR2J3-207ENST00000503564 NAT6Q93015 286 aa14.32□□□□□ -0.12
POLR2J3-207ENST00000503564 GDAP1L1Q96MZ0 367 aa14.32□□□□□ -0.12
POLR2J3-207ENST00000503564 EPAS1Q99814 870 aa14.32□□□□□ -0.12
POLR2J3-207ENST00000503564 CCDC3Q9BQI4 270 aa14.32□□□□□ -0.12
POLR2J3-207ENST00000503564 MBNL1Q9NR56 388 aaKnown RBP14.32□□□□□ -0.12
POLR2J3-207ENST00000503564 AHCTF1Q8WYP5 2266 aa14.31□□□□□ -0.12
POLR2J3-207ENST00000503564 ZSCAN5CA6NGD5 496 aaPredicted RBP14.31□□□□□ -0.12
POLR2J3-207ENST00000503564 NTN3O00634 580 aaPredicted RBP14.31□□□□□ -0.12
POLR2J3-207ENST00000503564 TOR1BO14657 336 aa14.31□□□□□ -0.12
POLR2J3-207ENST00000503564 YY2O15391 372 aa14.31□□□□□ -0.12
POLR2J3-207ENST00000503564 KDELR3O43731 214 aa14.31□□□□□ -0.12
POLR2J3-207ENST00000503564 MMP20O60882 483 aa14.31□□□□□ -0.12
POLR2J3-207ENST00000503564 TM7SF2O76062 418 aa14.31□□□□□ -0.12
POLR2J3-207ENST00000503564 ANXA6P08133 673 aa14.31□□□□□ -0.12
POLR2J3-207ENST00000503564 PLEKP08567 350 aaPredicted RBP14.31□□□□□ -0.12
POLR2J3-207ENST00000503564 TSHRP16473 764 aa14.31□□□□□ -0.12
POLR2J3-207ENST00000503564 ITIH2P19823 946 aa14.31□□□□□ -0.12
POLR2J3-207ENST00000503564 ERCC5P28715 1186 aaPredicted RBP14.31□□□□□ -0.12
POLR2J3-207ENST00000503564 MLLT3P42568 568 aaPredicted RBP14.31□□□□□ -0.12
POLR2J3-207ENST00000503564 RPIAP49247 311 aa14.31□□□□□ -0.12
POLR2J3-207ENST00000503564 GSCP56915 257 aaPredicted RBP14.31□□□□□ -0.12
POLR2J3-207ENST00000503564 CDR2Q01850 454 aa14.31□□□□□ -0.12
POLR2J3-207ENST00000503564 PTP4A2Q12974 167 aa14.31□□□□□ -0.12
POLR2J3-207ENST00000503564 IRF4Q15306 451 aa14.31□□□□□ -0.12
POLR2J3-207ENST00000503564 PHLDB2Q86SQ0 1253 aa14.31□□□□□ -0.12
POLR2J3-207ENST00000503564 WDR36Q8NI36 951 aaKnown RBP14.31□□□□□ -0.12
POLR2J3-207ENST00000503564 WDR48Q8TAF3 677 aa14.31□□□□□ -0.12
POLR2J3-207ENST00000503564 NTAN1Q96AB6 310 aa14.31□□□□□ -0.12
POLR2J3-207ENST00000503564 C11orf70Q9BRQ4 267 aa14.31□□□□□ -0.12
POLR2J3-207ENST00000503564 TTYH3Q9C0H2 523 aa14.31□□□□□ -0.12
POLR2J3-207ENST00000503564 KLC2Q9H0B6 622 aa14.31□□□□□ -0.12
POLR2J3-207ENST00000503564 CLSTN2Q9H4D0 955 aa14.31□□□□□ -0.12
POLR2J3-207ENST00000503564 SAMSN1Q9NSI8 373 aaKnown RBP14.31□□□□□ -0.12
POLR2J3-207ENST00000503564 DKK3Q9UBP4 350 aa14.31□□□□□ -0.12
POLR2J3-207ENST00000503564 HPCAL4Q9UM19 191 aa14.31□□□□□ -0.12
POLR2J3-207ENST00000503564 MFHAS1Q9Y4C4 1052 aa14.31□□□□□ -0.12
POLR2J3-207ENST00000503564 K7ENP7 123 aa14.3□□□□□ -0.12
POLR2J3-207ENST00000503564 GFPT2O94808 682 aa14.3□□□□□ -0.12
POLR2J3-207ENST00000503564 IGSF6O95976 241 aa14.3□□□□□ -0.12
POLR2J3-207ENST00000503564 TIMP2P16035 220 aa14.3□□□□□ -0.12
POLR2J3-207ENST00000503564 EIF4A3P38919 411 aaKnown RBP14.3□□□□□ -0.12
POLR2J3-207ENST00000503564 JAM2P57087 298 aa14.3□□□□□ -0.12
POLR2J3-207ENST00000503564 CLN3Q13286 438 aa14.3□□□□□ -0.12
POLR2J3-207ENST00000503564 SPIDRQ14159 915 aa14.3□□□□□ -0.12
POLR2J3-207ENST00000503564 LY6DQ14210 128 aa14.3□□□□□ -0.12
POLR2J3-207ENST00000503564 KLHL40Q2TBA0 621 aa14.3□□□□□ -0.12
POLR2J3-207ENST00000503564 INO80CQ6PI98 192 aaPredicted RBP14.3□□□□□ -0.12
POLR2J3-207ENST00000503564 TTC7BQ86TV6 843 aa14.3□□□□□ -0.12
POLR2J3-207ENST00000503564 RTL3Q8N8U3 475 aaKnown RBP14.3□□□□□ -0.12
POLR2J3-207ENST00000503564 KYQ8NBH2 561 aa14.3□□□□□ -0.12
POLR2J3-207ENST00000503564 NETO2Q8NC67 525 aa14.3□□□□□ -0.12
POLR2J3-207ENST00000503564 SLC30A5Q8TAD4 765 aa14.3□□□□□ -0.12
POLR2J3-207ENST00000503564 CXorf40AQ8TE69 158 aa14.3□□□□□ -0.12
POLR2J3-207ENST00000503564 FAM172AQ8WUF8 416 aa14.3□□□□□ -0.12
POLR2J3-207ENST00000503564 CASKIN2Q8WXE0 1202 aa14.3□□□□□ -0.12
POLR2J3-207ENST00000503564 GLMNQ92990 594 aa14.3□□□□□ -0.12
POLR2J3-207ENST00000503564 WRAP53Q9BUR4 548 aaKnown RBP14.3□□□□□ -0.12
POLR2J3-207ENST00000503564 C1QTNF7Q9BXJ2 289 aa14.3□□□□□ -0.12
POLR2J3-207ENST00000503564 SLC13A1Q9BZW2 595 aa14.3□□□□□ -0.12
POLR2J3-207ENST00000503564 LHX3Q9UBR4 397 aa14.3□□□□□ -0.12
POLR2J3-207ENST00000503564 RABGEF1Q9UJ41 708 aa14.3□□□□□ -0.12
POLR2J3-207ENST00000503564 PADI4Q9UM07 663 aa14.3□□□□□ -0.12
POLR2J3-207ENST00000503564 CCDC187A0A096LP49 1063 aa14.29□□□□□ -0.12
POLR2J3-207ENST00000503564 TSPAN11A1L157 253 aa14.29□□□□□ -0.12
POLR2J3-207ENST00000503564 J3QKU1 62 aa14.29□□□□□ -0.12
POLR2J3-207ENST00000503564 PES1O00541 588 aaKnown RBP14.29□□□□□ -0.12
POLR2J3-207ENST00000503564 INSIG1O15503 277 aa14.29□□□□□ -0.12
POLR2J3-207ENST00000503564 BUB1O43683 1085 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms