RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 PEX5P50542 639 aa18.43■□□□□ 0.54
PDLIM7-209ENST00000503346 SCNN1BP51168 640 aa18.43■□□□□ 0.54
PDLIM7-209ENST00000503346 SUOXP51687 545 aa18.43■□□□□ 0.54
PDLIM7-209ENST00000503346 AFF3P51826 1226 aaKnown RBP18.43■□□□□ 0.54
PDLIM7-209ENST00000503346 RACK1P63244 317 aaKnown RBP18.43■□□□□ 0.54
PDLIM7-209ENST00000503346 PPIDQ08752 370 aaKnown RBP18.43■□□□□ 0.54
PDLIM7-209ENST00000503346 TFDP3Q5H9I0 405 aa18.43■□□□□ 0.54
PDLIM7-209ENST00000503346 RALGPS1Q5JS13 557 aa18.43■□□□□ 0.54
PDLIM7-209ENST00000503346 PRPF39Q86UA1 669 aaKnown RBP18.43■□□□□ 0.54
PDLIM7-209ENST00000503346 HORMAD1Q86X24 394 aa18.43■□□□□ 0.54
PDLIM7-209ENST00000503346 OLFM3Q96PB7 478 aa18.43■□□□□ 0.54
PDLIM7-209ENST00000503346 NUDCD1Q96RS6 583 aa18.43■□□□□ 0.54
PDLIM7-209ENST00000503346 AMACRQ9UHK6 382 aa18.43■□□□□ 0.54
PDLIM7-209ENST00000503346 DMTF1Q9Y222 760 aa18.43■□□□□ 0.54
PDLIM7-209ENST00000503346 HEY1Q9Y5J3 304 aa18.43■□□□□ 0.54
PDLIM7-209ENST00000503346 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.42■□□□□ 0.54
PDLIM7-209ENST00000503346 A0A1W2PQU0 124 aa18.42■□□□□ 0.54
PDLIM7-209ENST00000503346 AREL1O15033 823 aa18.42■□□□□ 0.54
PDLIM7-209ENST00000503346 SPINT1O43278 529 aa18.42■□□□□ 0.54
PDLIM7-209ENST00000503346 TSPAN6O43657 245 aa18.42■□□□□ 0.54
PDLIM7-209ENST00000503346 KRT86O43790 486 aa18.42■□□□□ 0.54
PDLIM7-209ENST00000503346 NRDCO43847 1150 aa18.42■□□□□ 0.54
PDLIM7-209ENST00000503346 CST8O60676 142 aa18.42■□□□□ 0.54
PDLIM7-209ENST00000503346 GJB3O75712 270 aa18.42■□□□□ 0.54
PDLIM7-209ENST00000503346 TIMP2P16035 220 aa18.42■□□□□ 0.54
PDLIM7-209ENST00000503346 SDHBP21912 280 aa18.42■□□□□ 0.54
PDLIM7-209ENST00000503346 SERPINA4P29622 427 aa18.42■□□□□ 0.54
PDLIM7-209ENST00000503346 GRIA4P48058 902 aa18.42■□□□□ 0.54
PDLIM7-209ENST00000503346 NR2C2P49116 596 aa18.42■□□□□ 0.54
PDLIM7-209ENST00000503346 COPS2P61201 443 aa18.42■□□□□ 0.54
PDLIM7-209ENST00000503346 DYNLT1P63172 113 aa18.42■□□□□ 0.54
PDLIM7-209ENST00000503346 PDK1Q15118 436 aa18.42■□□□□ 0.54
PDLIM7-209ENST00000503346 ZNF284Q2VY69 593 aa18.42■□□□□ 0.54
PDLIM7-209ENST00000503346 KIAA1161Q6NSJ0 714 aa18.42■□□□□ 0.54
PDLIM7-209ENST00000503346 BRAT1Q6PJG6 821 aa18.42■□□□□ 0.54
PDLIM7-209ENST00000503346 NPNTQ6UXI9 565 aa18.42■□□□□ 0.54
PDLIM7-209ENST00000503346 ZNF662Q6ZS27 426 aa18.42■□□□□ 0.54
PDLIM7-209ENST00000503346 TTC7BQ86TV6 843 aa18.42■□□□□ 0.54
PDLIM7-209ENST00000503346 ZSCAN30Q86W11 494 aa18.42■□□□□ 0.54
PDLIM7-209ENST00000503346 CAMK1DQ8IU85 385 aa18.42■□□□□ 0.54
PDLIM7-209ENST00000503346 CCDC13Q8IYE1 715 aa18.42■□□□□ 0.54
PDLIM7-209ENST00000503346 CCNYQ8ND76 341 aa18.42■□□□□ 0.54
PDLIM7-209ENST00000503346 ECHDC3Q96DC8 303 aa18.42■□□□□ 0.54
PDLIM7-209ENST00000503346 NSMCE3Q96MG7 304 aa18.42■□□□□ 0.54
PDLIM7-209ENST00000503346 ZDHHC5Q9C0B5 715 aa18.42■□□□□ 0.54
PDLIM7-209ENST00000503346 BRD8Q9H0E9 1235 aa18.42■□□□□ 0.54
PDLIM7-209ENST00000503346 AMFRQ9UKV5 643 aa18.42■□□□□ 0.54
PDLIM7-209ENST00000503346 ZFR2Q9UPR6 939 aaKnown RBP18.42■□□□□ 0.54
PDLIM7-209ENST00000503346 TRAFD1O14545 582 aaPredicted RBP18.41■□□□□ 0.54
PDLIM7-209ENST00000503346 ARHGAP33O14559 1287 aa18.41■□□□□ 0.54
PDLIM7-209ENST00000503346 CDX4O14627 284 aaPredicted RBP18.41■□□□□ 0.54
PDLIM7-209ENST00000503346 PPP1R12AO14974 1030 aaPredicted RBP18.41■□□□□ 0.54
PDLIM7-209ENST00000503346 PCDH8O95206 1070 aa18.41■□□□□ 0.54
PDLIM7-209ENST00000503346 SYPP08247 313 aa18.41■□□□□ 0.54
PDLIM7-209ENST00000503346 CCDC175P0C221 793 aa18.41■□□□□ 0.54
PDLIM7-209ENST00000503346 CCNB1P14635 433 aa18.41■□□□□ 0.54
PDLIM7-209ENST00000503346 TGM2P21980 687 aa18.41■□□□□ 0.54
PDLIM7-209ENST00000503346 MAT2AP31153 395 aaKnown RBP18.41■□□□□ 0.54
PDLIM7-209ENST00000503346 RWDD2BP57060 319 aa18.41■□□□□ 0.54
PDLIM7-209ENST00000503346 BCL2L1Q07817 233 aa18.41■□□□□ 0.54
PDLIM7-209ENST00000503346 ADCY2Q08462 1091 aa18.41■□□□□ 0.54
PDLIM7-209ENST00000503346 TMEM259Q4ZIN3 620 aa18.41■□□□□ 0.54
PDLIM7-209ENST00000503346 SETMARQ53H47 684 aaPredicted RBP18.41■□□□□ 0.54
PDLIM7-209ENST00000503346 KAZNQ674X7 775 aa18.41■□□□□ 0.54
PDLIM7-209ENST00000503346 ALG1LQ6GMV1 187 aa18.41■□□□□ 0.54
PDLIM7-209ENST00000503346 BZW1Q7L1Q6 419 aaKnown RBP18.41■□□□□ 0.54
PDLIM7-209ENST00000503346 PEX26Q7Z412 305 aa18.41■□□□□ 0.54
PDLIM7-209ENST00000503346 CCDC50Q8IVM0 306 aa18.41■□□□□ 0.54
PDLIM7-209ENST00000503346 LRRN4Q8WUT4 740 aa18.41■□□□□ 0.54
PDLIM7-209ENST00000503346 SPOCK2Q92563 424 aa18.41■□□□□ 0.54
PDLIM7-209ENST00000503346 FEM1CQ96JP0 617 aa18.41■□□□□ 0.54
PDLIM7-209ENST00000503346 SLC6A18Q96N87 628 aa18.41■□□□□ 0.54
PDLIM7-209ENST00000503346 LGMNQ99538 433 aa18.41■□□□□ 0.54
PDLIM7-209ENST00000503346 NOD2Q9HC29 1040 aa18.41■□□□□ 0.54
PDLIM7-209ENST00000503346 NT5MQ9NPB1 228 aa18.41■□□□□ 0.54
PDLIM7-209ENST00000503346 SCUBE2Q9NQ36 999 aa18.41■□□□□ 0.54
PDLIM7-209ENST00000503346 FSCN3Q9NQT6 498 aa18.41■□□□□ 0.54
PDLIM7-209ENST00000503346 HAUS2Q9NVX0 235 aa18.41■□□□□ 0.54
PDLIM7-209ENST00000503346 EFR3BQ9Y2G0 817 aa18.41■□□□□ 0.54
PDLIM7-209ENST00000503346 CAPN6Q9Y6Q1 641 aa18.41■□□□□ 0.54
PDLIM7-209ENST00000503346 GON4LQ3T8J9 2241 aa18.4■□□□□ 0.54
PDLIM7-209ENST00000503346 MIF4GDA9UHW6 222 aaKnown RBP18.4■□□□□ 0.54
PDLIM7-209ENST00000503346 HTRA2O43464 458 aaPredicted RBP18.4■□□□□ 0.54
PDLIM7-209ENST00000503346 SOCS5O75159 536 aa18.4■□□□□ 0.54
PDLIM7-209ENST00000503346 PTPN7P35236 360 aa18.4■□□□□ 0.54
PDLIM7-209ENST00000503346 CSNK1EP49674 416 aaKnown RBP18.4■□□□□ 0.54
PDLIM7-209ENST00000503346 MAXP61244 160 aa18.4■□□□□ 0.54
PDLIM7-209ENST00000503346 RPS21P63220 83 aaKnown RBP18.4■□□□□ 0.54
PDLIM7-209ENST00000503346 IFI35P80217 286 aaPredicted RBP18.4■□□□□ 0.54
PDLIM7-209ENST00000503346 GRIK2Q13002 908 aa18.4■□□□□ 0.54
PDLIM7-209ENST00000503346 LLGL1Q15334 1064 aa18.4■□□□□ 0.54
PDLIM7-209ENST00000503346 TEAD4Q15561 434 aa18.4■□□□□ 0.54
PDLIM7-209ENST00000503346 UGP2Q16851 508 aa18.4■□□□□ 0.54
PDLIM7-209ENST00000503346 RSPO4Q2I0M5 234 aaPredicted RBP18.4■□□□□ 0.54
PDLIM7-209ENST00000503346 CFAP58Q5T655 872 aa18.4■□□□□ 0.54
PDLIM7-209ENST00000503346 STPG1Q5TH74 334 aa18.4■□□□□ 0.54
PDLIM7-209ENST00000503346 SEL1L3Q68CR1 1132 aa18.4■□□□□ 0.54
PDLIM7-209ENST00000503346 NAPEPLDQ6IQ20 393 aa18.4■□□□□ 0.54
PDLIM7-209ENST00000503346 BBS12Q6ZW61 710 aa18.4■□□□□ 0.54
PDLIM7-209ENST00000503346 ZSWIM9Q86XI8 627 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms