RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 PREBQ9HCU5 417 aa25.38■■□□□ 1.65
LSM6-202ENST00000502781 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.38■■□□□ 1.65
LSM6-202ENST00000502781 TTC24A2A3L6 582 aaPredicted RBP25.37■■□□□ 1.65
LSM6-202ENST00000502781 HTRA2O43464 458 aaPredicted RBP25.37■■□□□ 1.65
LSM6-202ENST00000502781 CES1P23141 567 aa25.37■■□□□ 1.65
LSM6-202ENST00000502781 ITPKAP23677 461 aa25.37■■□□□ 1.65
LSM6-202ENST00000502781 SERPINA4P29622 427 aa25.37■■□□□ 1.65
LSM6-202ENST00000502781 ABL2P42684 1182 aa25.37■■□□□ 1.65
LSM6-202ENST00000502781 CCR5P51681 352 aa25.37■■□□□ 1.65
LSM6-202ENST00000502781 BCL2L1Q07817 233 aa25.37■■□□□ 1.65
LSM6-202ENST00000502781 SLC45A4Q5BKX6 768 aa25.37■■□□□ 1.65
LSM6-202ENST00000502781 CCDC181Q5TID7 509 aa25.37■■□□□ 1.65
LSM6-202ENST00000502781 NEK5Q6P3R8 708 aa25.37■■□□□ 1.65
LSM6-202ENST00000502781 FBXL19Q6PCT2 694 aa25.37■■□□□ 1.65
LSM6-202ENST00000502781 BRAT1Q6PJG6 821 aa25.37■■□□□ 1.65
LSM6-202ENST00000502781 BIRC7Q96CA5 298 aa25.37■■□□□ 1.65
LSM6-202ENST00000502781 SEMA3CQ99985 751 aa25.37■■□□□ 1.65
LSM6-202ENST00000502781 SCUBE2Q9NQ36 999 aa25.37■■□□□ 1.65
LSM6-202ENST00000502781 HAUS2Q9NVX0 235 aa25.37■■□□□ 1.65
LSM6-202ENST00000502781 PILRBQ9UKJ0 227 aa25.37■■□□□ 1.65
LSM6-202ENST00000502781 TPX2Q9ULW0 747 aaKnown RBP25.37■■□□□ 1.65
LSM6-202ENST00000502781 JRKLQ9Y4A0 524 aa25.37■■□□□ 1.65
LSM6-202ENST00000502781 FADS3Q9Y5Q0 445 aa25.37■■□□□ 1.65
LSM6-202ENST00000502781 GVINP1Q7Z2Y8 2422 aa25.37■■□□□ 1.65
LSM6-202ENST00000502781 TCRBV7S2A1N4TA0A589 114 aa25.36■■□□□ 1.65
LSM6-202ENST00000502781 GOLGA6L9A6NEM1 432 aa25.36■■□□□ 1.65
LSM6-202ENST00000502781 AREL1O15033 823 aa25.36■■□□□ 1.65
LSM6-202ENST00000502781 SPINT1O43278 529 aa25.36■■□□□ 1.65
LSM6-202ENST00000502781 MTSS1O43312 755 aa25.36■■□□□ 1.65
LSM6-202ENST00000502781 LATO43561 262 aa25.36■■□□□ 1.65
LSM6-202ENST00000502781 SOCS5O75159 536 aa25.36■■□□□ 1.65
LSM6-202ENST00000502781 TIMP2P16035 220 aa25.36■■□□□ 1.65
LSM6-202ENST00000502781 HOXD12P35452 270 aa25.36■■□□□ 1.65
LSM6-202ENST00000502781 WASHC5Q12768 1159 aa25.36■■□□□ 1.65
LSM6-202ENST00000502781 IHHQ14623 411 aa25.36■■□□□ 1.65
LSM6-202ENST00000502781 TEX44Q53QW1 395 aa25.36■■□□□ 1.65
LSM6-202ENST00000502781 WDR45BQ5MNZ6 344 aa25.36■■□□□ 1.65
LSM6-202ENST00000502781 PLA2G2CQ5R387 149 aa25.36■■□□□ 1.65
LSM6-202ENST00000502781 SYCP2LQ5T4T6 812 aa25.36■■□□□ 1.65
LSM6-202ENST00000502781 SEL1L2Q5TEA6 688 aa25.36■■□□□ 1.65
LSM6-202ENST00000502781 CYP2U1Q7Z449 544 aa25.36■■□□□ 1.65
LSM6-202ENST00000502781 ZSWIM9Q86XI8 627 aa25.36■■□□□ 1.65
LSM6-202ENST00000502781 TTC13Q8NBP0 860 aa25.36■■□□□ 1.65
LSM6-202ENST00000502781 C1orf216Q8TAB5 229 aa25.36■■□□□ 1.65
LSM6-202ENST00000502781 ORAI3Q9BRQ5 295 aa25.36■■□□□ 1.65
LSM6-202ENST00000502781 ARRDC1-AS1Q9H2J1 176 aa25.36■■□□□ 1.65
LSM6-202ENST00000502781 NCDNQ9UBB6 729 aa25.36■■□□□ 1.65
LSM6-202ENST00000502781 FAM47DPA6NHR8 397 aa25.35■■□□□ 1.65
LSM6-202ENST00000502781 KCNK3O14649 394 aa25.35■■□□□ 1.65
LSM6-202ENST00000502781 GFRA3O60609 400 aa25.35■■□□□ 1.65
LSM6-202ENST00000502781 PTPN3P26045 913 aa25.35■■□□□ 1.65
LSM6-202ENST00000502781 DPP6P42658 865 aa25.35■■□□□ 1.65
LSM6-202ENST00000502781 CREB5Q02930 508 aa25.35■■□□□ 1.65
LSM6-202ENST00000502781 TRIM69Q86WT6 500 aa25.35■■□□□ 1.65
LSM6-202ENST00000502781 SLC13A5Q86YT5 568 aaPredicted RBP25.35■■□□□ 1.65
LSM6-202ENST00000502781 SYT12Q8IV01 421 aa25.35■■□□□ 1.65
LSM6-202ENST00000502781 KCND1Q9NSA2 647 aa25.35■■□□□ 1.65
LSM6-202ENST00000502781 TMEM74BQ9NUR3 256 aa25.35■■□□□ 1.65
LSM6-202ENST00000502781 PTPRZ1P23471 2315 aaPredicted RBP25.35■■□□□ 1.65
LSM6-202ENST00000502781 TNRC6BQ9UPQ9 1833 aaKnown RBP25.34■■□□□ 1.65
LSM6-202ENST00000502781 TBC1D3DA0A087WVF3 549 aa25.34■■□□□ 1.65
LSM6-202ENST00000502781 TBC1D3IA0A087WXS9 549 aa25.34■■□□□ 1.65
LSM6-202ENST00000502781 TBC1D3EA0A087X179 549 aa25.34■■□□□ 1.65
LSM6-202ENST00000502781 TBC1D3KA0A087X1G2 549 aa25.34■■□□□ 1.65
LSM6-202ENST00000502781 TBC1D3FA6NER0 549 aaPredicted RBP25.34■■□□□ 1.65
LSM6-202ENST00000502781 TBC1D3LB9A6J9 549 aa25.34■■□□□ 1.65
LSM6-202ENST00000502781 KIF5CO60282 957 aa25.34■■□□□ 1.65
LSM6-202ENST00000502781 LRP3O75074 770 aa25.34■■□□□ 1.65
LSM6-202ENST00000502781 NEBLO76041 1014 aa25.34■■□□□ 1.65
LSM6-202ENST00000502781 TBC1D3HP0C7X1 549 aa25.34■■□□□ 1.65
LSM6-202ENST00000502781 RBP3P10745 1247 aa25.34■■□□□ 1.65
LSM6-202ENST00000502781 TGM1P22735 817 aa25.34■■□□□ 1.65
LSM6-202ENST00000502781 MPLP40238 635 aa25.34■■□□□ 1.65
LSM6-202ENST00000502781 SUOXP51687 545 aa25.34■■□□□ 1.65
LSM6-202ENST00000502781 PPP2CBP62714 309 aa25.34■■□□□ 1.65
LSM6-202ENST00000502781 PPP2CAP67775 309 aa25.34■■□□□ 1.65
LSM6-202ENST00000502781 DSC2Q02487 901 aa25.34■■□□□ 1.65
LSM6-202ENST00000502781 NIPAL4Q0D2K0 466 aa25.34■■□□□ 1.65
LSM6-202ENST00000502781 TRAF2Q12933 501 aa25.34■■□□□ 1.65
LSM6-202ENST00000502781 UGP2Q16851 508 aa25.34■■□□□ 1.65
LSM6-202ENST00000502781 ZNF569Q5MCW4 686 aa25.34■■□□□ 1.65
LSM6-202ENST00000502781 TBC1D3GQ6DHY5 549 aa25.34■■□□□ 1.65
LSM6-202ENST00000502781 TBC1D3CQ6IPX1 549 aa25.34■■□□□ 1.65
LSM6-202ENST00000502781 TBC1D3Q8IZP1 549 aaPredicted RBP25.34■■□□□ 1.65
LSM6-202ENST00000502781 SLC35F6Q8N357 371 aa25.34■■□□□ 1.65
LSM6-202ENST00000502781 HTR3CQ8WXA8 447 aa25.34■■□□□ 1.65
LSM6-202ENST00000502781 TEKT5Q96M29 485 aa25.34■■□□□ 1.65
LSM6-202ENST00000502781 VAT1Q99536 393 aa25.34■■□□□ 1.65
LSM6-202ENST00000502781 PCDHGC4Q9Y5F7 938 aa25.34■■□□□ 1.65
LSM6-202ENST00000502781 MEI4A8MW99 385 aa25.33■■□□□ 1.65
LSM6-202ENST00000502781 EIF3EP60228 445 aaKnown RBP25.33■■□□□ 1.65
LSM6-202ENST00000502781 ITKQ08881 620 aa25.33■■□□□ 1.65
LSM6-202ENST00000502781 TTC7BQ86TV6 843 aa25.33■■□□□ 1.65
LSM6-202ENST00000502781 DCLK2Q8N568 766 aa25.33■■□□□ 1.65
LSM6-202ENST00000502781 SLC35B2Q8TB61 432 aa25.33■■□□□ 1.65
LSM6-202ENST00000502781 PIGKQ92643 395 aa25.33■■□□□ 1.65
LSM6-202ENST00000502781 CEP41Q9BYV8 373 aa25.33■■□□□ 1.65
LSM6-202ENST00000502781 EBF2Q9HAK2 575 aa25.33■■□□□ 1.65
LSM6-202ENST00000502781 SEPT10Q9P0V9 454 aa25.33■■□□□ 1.65
LSM6-202ENST00000502781 R3HDM2Q9Y2K5 976 aaKnown RBP25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms