RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 GSTA3Q16772 222 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 TXNDC11Q6PKC3 985 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 CHST9Q7L1S5 443 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 KLHDC8BQ8IXV7 354 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 NKAPQ8N5F7 415 aaKnown RBP7.48□□□□□ -1.21
PDGFC-203ENST00000502773 OR6P1Q8NGX9 317 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 LPPQ93052 612 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 TTPALQ9BTX7 342 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 ALG13Q9NP73 1137 aaKnown RBP7.48□□□□□ -1.21
PDGFC-203ENST00000502773 TMEM45AQ9NWC5 275 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 HNRNPRO43390 633 aaKnown RBP7.47□□□□□ -1.21
PDGFC-203ENST00000502773 KDM1AO60341 852 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 BRCC3P46736 316 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 RAD51Q06609 339 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 MMEL1Q495T6 779 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 HECTD3Q5T447 861 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 KCTD11Q693B1 232 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 NXNQ6DKJ4 435 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 THOC7Q6I9Y2 204 aaKnown RBP7.47□□□□□ -1.21
PDGFC-203ENST00000502773 FSTL4Q6MZW2 842 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 ZNF598Q86UK7 904 aaKnown RBP7.47□□□□□ -1.21
PDGFC-203ENST00000502773 TMEM126BQ8IUX1 230 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 CNTD1Q8N815 330 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 DNAJC9Q8WXX5 260 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 NDNQ99608 321 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 C19orf43Q9BQ61 176 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 BEGAINQ9BUH8 593 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 AASDHPPTQ9NRN7 309 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 ZMYM5Q9UJ78 669 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 CCDC195A0A1B0GUA6 201 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 KANSL1LA0AUZ9 987 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 HHLA1C9JL84 531 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 CASQ2O14958 399 aaPredicted RBP7.47□□□□□ -1.21
PDGFC-203ENST00000502773 PMPCBO75439 489 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 IGLV3-25P01717 112 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 YY1P25490 414 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 WNT3AP56704 352 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 KCNJ2P63252 427 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 TNK2Q07912 1038 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 NSUN2Q08J23 767 aaKnown RBP eCLIP7.47□□□□□ -1.21
PDGFC-203ENST00000502773 EFEMP1Q12805 493 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 SERINC3Q13530 473 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 CYLC2Q14093 348 aaPredicted RBP7.47□□□□□ -1.21
PDGFC-203ENST00000502773 CRY1Q16526 586 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 TSTD2Q5T7W7 516 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 CST9Q5W186 159 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 KIF2BQ8N4N8 673 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 PABPC5Q96DU9 382 aaKnown RBP7.47□□□□□ -1.21
PDGFC-203ENST00000502773 MAGEB10Q96LZ2 347 aaPredicted RBP7.47□□□□□ -1.21
PDGFC-203ENST00000502773 ZBED2Q9BTP6 218 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 CFHR5Q9BXR6 569 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 MFSD1Q9H3U5 465 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 OXSMQ9NWU1 459 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 STX18Q9P2W9 335 aaKnown RBP7.47□□□□□ -1.21
PDGFC-203ENST00000502773 BACE2Q9Y5Z0 518 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 CXorf49A8MYA2 514 aaPredicted RBP7.47□□□□□ -1.21
PDGFC-203ENST00000502773 NDUFS3O75489 264 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 MAP3K6O95382 1288 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 CKBP12277 381 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 OR1E1P30953 314 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 MAGEA12P43365 314 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 DSC1Q08554 894 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 LBRQ14739 615 aaKnown RBP7.47□□□□□ -1.21
PDGFC-203ENST00000502773 SPOUT1Q5T280 376 aaKnown RBP7.47□□□□□ -1.21
PDGFC-203ENST00000502773 ZNF618Q5T7W0 954 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 MBLAC2Q68D91 279 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 LRRC8EQ6NSJ5 796 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 AFTPHQ6ULP2 937 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 SH2D5Q6ZV89 423 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 ADGRG6Q86SQ4 1221 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 KYQ8NBH2 561 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 FLCNQ8NFG4 579 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 TRIB2Q92519 343 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 ZNF512Q96ME7 567 aaPredicted RBP7.47□□□□□ -1.21
PDGFC-203ENST00000502773 C8orf4Q9NR00 106 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 NDUFA13Q9P0J0 144 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 UBA2Q9UBT2 640 aaPredicted RBP7.47□□□□□ -1.21
PDGFC-203ENST00000502773 SLC8A2Q9UPR5 921 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 ASB3Q9Y575 518 aa7.47□□□□□ -1.21
PDGFC-203ENST00000502773 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.46□□□□□ -1.21
PDGFC-203ENST00000502773 A0A1W2PQH9 124 aa7.46□□□□□ -1.21
PDGFC-203ENST00000502773 VAPBO95292 243 aa7.46□□□□□ -1.21
PDGFC-203ENST00000502773 KITP10721 976 aa7.46□□□□□ -1.21
PDGFC-203ENST00000502773 PPM1AP35813 382 aa7.46□□□□□ -1.21
PDGFC-203ENST00000502773 EPHB3P54753 998 aa7.46□□□□□ -1.21
PDGFC-203ENST00000502773 PDAP1Q13442 181 aaKnown RBP7.46□□□□□ -1.21
PDGFC-203ENST00000502773 GEN1Q17RS7 908 aa7.46□□□□□ -1.21
PDGFC-203ENST00000502773 SYCP2LQ5T4T6 812 aa7.46□□□□□ -1.21
PDGFC-203ENST00000502773 C6orf183Q5T699 404 aa7.46□□□□□ -1.21
PDGFC-203ENST00000502773 ZDHHC20Q5W0Z9 365 aa7.46□□□□□ -1.21
PDGFC-203ENST00000502773 TRMT10BQ6PF06 316 aaKnown RBP7.46□□□□□ -1.21
PDGFC-203ENST00000502773 ZNF534Q76KX8 674 aa7.46□□□□□ -1.21
PDGFC-203ENST00000502773 ZMIZ2Q8NF64 920 aa7.46□□□□□ -1.21
PDGFC-203ENST00000502773 ADAM32Q8TC27 787 aa7.46□□□□□ -1.21
PDGFC-203ENST00000502773 BRSK1Q8TDC3 778 aa7.46□□□□□ -1.21
PDGFC-203ENST00000502773 SEPT5Q99719 369 aaPredicted RBP7.46□□□□□ -1.21
PDGFC-203ENST00000502773 OSBPL10Q9BXB5 764 aa7.46□□□□□ -1.21
PDGFC-203ENST00000502773 NT5MQ9NPB1 228 aa7.46□□□□□ -1.21
PDGFC-203ENST00000502773 RIC8BQ9NVN3 520 aa7.46□□□□□ -1.21
PDGFC-203ENST00000502773 GID8Q9NWU2 228 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms