RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 A0A087X1B8 175 aa9.95□□□□□ -0.82
CLIP1-204ENST00000501271 SLCO1B7G3V0H7 640 aa9.95□□□□□ -0.82
CLIP1-204ENST00000501271 KCNA5P22460 613 aa9.95□□□□□ -0.82
CLIP1-204ENST00000501271 DPP6P42658 865 aa9.95□□□□□ -0.82
CLIP1-204ENST00000501271 GPR15P49685 360 aa9.95□□□□□ -0.82
CLIP1-204ENST00000501271 CSHL1Q14406 222 aa9.95□□□□□ -0.82
CLIP1-204ENST00000501271 IHHQ14623 411 aa9.95□□□□□ -0.82
CLIP1-204ENST00000501271 TRIP10Q15642 601 aa9.95□□□□□ -0.82
CLIP1-204ENST00000501271 SH2D4BQ5SQS7 431 aa9.95□□□□□ -0.82
CLIP1-204ENST00000501271 NEPROQ6NW34 567 aa9.95□□□□□ -0.82
CLIP1-204ENST00000501271 C16orf89Q6UX73 402 aa9.95□□□□□ -0.82
CLIP1-204ENST00000501271 TRIM67Q6ZTA4 783 aa9.95□□□□□ -0.82
CLIP1-204ENST00000501271 APLFQ8IW19 511 aaPredicted RBP9.95□□□□□ -0.82
CLIP1-204ENST00000501271 PDCD6IPQ8WUM4 868 aaKnown RBP9.95□□□□□ -0.82
CLIP1-204ENST00000501271 STON2Q8WXE9 905 aa9.95□□□□□ -0.82
CLIP1-204ENST00000501271 TRIB2Q92519 343 aa9.95□□□□□ -0.82
CLIP1-204ENST00000501271 PPP2R3CQ969Q6 453 aa9.95□□□□□ -0.82
CLIP1-204ENST00000501271 MRPL57Q9BQC6 102 aaKnown RBP9.95□□□□□ -0.82
CLIP1-204ENST00000501271 CCDC28BQ9BUN5 200 aa9.95□□□□□ -0.82
CLIP1-204ENST00000501271 KLHL4Q9C0H6 718 aa9.95□□□□□ -0.82
CLIP1-204ENST00000501271 SUDS3Q9H7L9 328 aaPredicted RBP9.95□□□□□ -0.82
CLIP1-204ENST00000501271 ZBTB26Q9HCK0 441 aa9.95□□□□□ -0.82
CLIP1-204ENST00000501271 TBC1D13Q9NVG8 400 aa9.95□□□□□ -0.82
CLIP1-204ENST00000501271 ABI2Q9NYB9 513 aaPredicted RBP9.95□□□□□ -0.82
CLIP1-204ENST00000501271 CLIC5Q9NZA1 410 aa9.95□□□□□ -0.82
CLIP1-204ENST00000501271 STK39Q9UEW8 545 aa9.95□□□□□ -0.82
CLIP1-204ENST00000501271 PRPF19Q9UMS4 504 aaKnown RBP9.95□□□□□ -0.82
CLIP1-204ENST00000501271 COPG1Q9Y678 874 aaKnown RBP9.95□□□□□ -0.82
CLIP1-204ENST00000501271 VWA8A3KMH1 1905 aa9.95□□□□□ -0.82
CLIP1-204ENST00000501271 TTC24A2A3L6 582 aaPredicted RBP9.94□□□□□ -0.82
CLIP1-204ENST00000501271 J3KR12 359 aa9.94□□□□□ -0.82
CLIP1-204ENST00000501271 SDHDO14521 159 aa9.94□□□□□ -0.82
CLIP1-204ENST00000501271 SLC22A2O15244 555 aa9.94□□□□□ -0.82
CLIP1-204ENST00000501271 NPHS1O60500 1241 aa9.94□□□□□ -0.82
CLIP1-204ENST00000501271 HAPLN1P10915 354 aaPredicted RBP9.94□□□□□ -0.82
CLIP1-204ENST00000501271 HNRNPLP14866 589 aaKnown RBP eCLIP9.94□□□□□ -0.82
CLIP1-204ENST00000501271 ARSAP15289 507 aa9.94□□□□□ -0.82
CLIP1-204ENST00000501271 TYMPP19971 482 aa9.94□□□□□ -0.82
CLIP1-204ENST00000501271 ZNF157P51786 506 aaPredicted RBP9.94□□□□□ -0.82
CLIP1-204ENST00000501271 MLLT6P55198 1093 aaPredicted RBP9.94□□□□□ -0.82
CLIP1-204ENST00000501271 POU4F1Q01851 419 aa9.94□□□□□ -0.82
CLIP1-204ENST00000501271 NRG1Q02297 640 aaPredicted RBP9.94□□□□□ -0.82
CLIP1-204ENST00000501271 CACNB2Q08289 660 aaPredicted RBP9.94□□□□□ -0.82
CLIP1-204ENST00000501271 GPR162Q16538 588 aa9.94□□□□□ -0.82
CLIP1-204ENST00000501271 PIGGQ5H8A4 983 aa9.94□□□□□ -0.82
CLIP1-204ENST00000501271 TECRLQ5HYJ1 363 aa9.94□□□□□ -0.82
CLIP1-204ENST00000501271 FAM219BQ5XKK7 198 aa9.94□□□□□ -0.82
CLIP1-204ENST00000501271 BNC2Q6ZN30 1099 aaPredicted RBP9.94□□□□□ -0.82
CLIP1-204ENST00000501271 RPS27LQ71UM5 84 aaKnown RBP9.94□□□□□ -0.82
CLIP1-204ENST00000501271 ZNF683Q8IZ20 524 aa9.94□□□□□ -0.82
CLIP1-204ENST00000501271 OR13J1Q8NGT2 312 aa9.94□□□□□ -0.82
CLIP1-204ENST00000501271 HMCESQ96FZ2 354 aa9.94□□□□□ -0.82
CLIP1-204ENST00000501271 MAELQ96JY0 434 aaKnown RBP9.94□□□□□ -0.82
CLIP1-204ENST00000501271 UROC1Q96N76 676 aa9.94□□□□□ -0.82
CLIP1-204ENST00000501271 SERPINB11Q96P15 392 aa9.94□□□□□ -0.82
CLIP1-204ENST00000501271 PPP1R2P1Q96PQ5 205 aa9.94□□□□□ -0.82
CLIP1-204ENST00000501271 KLHL5Q96PQ7 755 aa9.94□□□□□ -0.82
CLIP1-204ENST00000501271 CDRT15Q96T59 188 aa9.94□□□□□ -0.82
CLIP1-204ENST00000501271 PRKD2Q9BZL6 878 aa9.94□□□□□ -0.82
CLIP1-204ENST00000501271 UPF3AQ9H1J1 476 aaKnown RBP9.94□□□□□ -0.82
CLIP1-204ENST00000501271 SLC25A51Q9H1U9 297 aa9.94□□□□□ -0.82
CLIP1-204ENST00000501271 PIDD1Q9HB75 910 aa9.94□□□□□ -0.82
CLIP1-204ENST00000501271 CYP4F12Q9HCS2 524 aa9.94□□□□□ -0.82
CLIP1-204ENST00000501271 ATP13A1Q9HD20 1204 aa9.94□□□□□ -0.82
CLIP1-204ENST00000501271 TNFRSF12AQ9NP84 129 aa9.94□□□□□ -0.82
CLIP1-204ENST00000501271 NT5MQ9NPB1 228 aa9.94□□□□□ -0.82
CLIP1-204ENST00000501271 NCKIPSDQ9NZQ3 722 aa9.94□□□□□ -0.82
CLIP1-204ENST00000501271 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.94□□□□□ -0.82
CLIP1-204ENST00000501271 MANSC4A6NHS7 340 aaPredicted RBP9.94□□□□□ -0.82
CLIP1-204ENST00000501271 ENO4A6NNW6 628 aa9.94□□□□□ -0.82
CLIP1-204ENST00000501271 WASH4PA8MWX3 477 aa9.94□□□□□ -0.82
CLIP1-204ENST00000501271 CCL22O00626 93 aa9.94□□□□□ -0.82
CLIP1-204ENST00000501271 CASQ2O14958 399 aaPredicted RBP9.94□□□□□ -0.82
CLIP1-204ENST00000501271 CNTN5O94779 1100 aa9.94□□□□□ -0.82
CLIP1-204ENST00000501271 MMP2P08253 660 aa9.94□□□□□ -0.82
CLIP1-204ENST00000501271 ENO3P13929 434 aaPredicted RBP9.94□□□□□ -0.82
CLIP1-204ENST00000501271 XRCC1P18887 633 aaPredicted RBP9.94□□□□□ -0.82
CLIP1-204ENST00000501271 ATP5F1P24539 256 aaPredicted RBP9.94□□□□□ -0.82
CLIP1-204ENST00000501271 MSX2P35548 267 aaPredicted RBP9.94□□□□□ -0.82
CLIP1-204ENST00000501271 CD86P42081 329 aa9.94□□□□□ -0.82
CLIP1-204ENST00000501271 SLC12A2P55011 1212 aa9.94□□□□□ -0.82
CLIP1-204ENST00000501271 PKNOX1P55347 436 aa9.94□□□□□ -0.82
CLIP1-204ENST00000501271 SULT2A1Q06520 285 aa9.94□□□□□ -0.82
CLIP1-204ENST00000501271 SLC10A7Q0GE19 358 aa9.94□□□□□ -0.82
CLIP1-204ENST00000501271 TRIM32Q13049 653 aa9.94□□□□□ -0.82
CLIP1-204ENST00000501271 CEACAM7Q14002 265 aa9.94□□□□□ -0.82
CLIP1-204ENST00000501271 ZNF423Q2M1K9 1284 aa9.94□□□□□ -0.82
CLIP1-204ENST00000501271 ALFQ53S48 1182 aa9.94□□□□□ -0.82
CLIP1-204ENST00000501271 PIWIL4Q7Z3Z4 852 aaKnown RBP9.94□□□□□ -0.82
CLIP1-204ENST00000501271 SETD3Q86TU7 594 aaPredicted RBP9.94□□□□□ -0.82
CLIP1-204ENST00000501271 ZNF598Q86UK7 904 aaKnown RBP9.94□□□□□ -0.82
CLIP1-204ENST00000501271 IFNL1Q8IU54 200 aa9.94□□□□□ -0.82
CLIP1-204ENST00000501271 RNF135Q8IUD6 432 aa9.94□□□□□ -0.82
CLIP1-204ENST00000501271 USP13Q92995 863 aaPredicted RBP9.94□□□□□ -0.82
CLIP1-204ENST00000501271 IMP4Q96G21 291 aaKnown RBP9.94□□□□□ -0.82
CLIP1-204ENST00000501271 SLC39A13Q96H72 371 aa9.94□□□□□ -0.82
CLIP1-204ENST00000501271 GTSE1Q9NYZ3 720 aa9.94□□□□□ -0.82
CLIP1-204ENST00000501271 PCDHB8Q9UN66 801 aa9.94□□□□□ -0.82
CLIP1-204ENST00000501271 FIS1Q9Y3D6 152 aa9.94□□□□□ -0.82
CLIP1-204ENST00000501271 MTF2Q9Y483 593 aaPredicted RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms