RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 LCLAT1Q6UWP7 414 aa9.07□□□□□ -0.96
FN1-227ENST00000498719 BZW1Q7L1Q6 419 aaKnown RBP9.07□□□□□ -0.96
FN1-227ENST00000498719 PRRT2Q7Z6L0 340 aaPredicted RBP9.07□□□□□ -0.96
FN1-227ENST00000498719 UNC5BQ8IZJ1 945 aa9.07□□□□□ -0.96
FN1-227ENST00000498719 CADM1Q9BY67 442 aaKnown RBP9.07□□□□□ -0.96
FN1-227ENST00000498719 ASB7Q9H672 318 aa9.07□□□□□ -0.96
FN1-227ENST00000498719 CYP3A43Q9HB55 503 aa9.07□□□□□ -0.96
FN1-227ENST00000498719 ETNK2Q9NVF9 386 aa9.07□□□□□ -0.96
FN1-227ENST00000498719 LHX6Q9UPM6 363 aa9.07□□□□□ -0.96
FN1-227ENST00000498719 HES2Q9Y543 173 aa9.07□□□□□ -0.96
FN1-227ENST00000498719 CORINQ9Y5Q5 1042 aa9.07□□□□□ -0.96
FN1-227ENST00000498719 SNX13Q9Y5W8 968 aa9.07□□□□□ -0.96
FN1-227ENST00000498719 SNX9Q9Y5X1 595 aa9.07□□□□□ -0.96
FN1-227ENST00000498719 ZSWIM8A7E2V4 1837 aa9.07□□□□□ -0.96
FN1-227ENST00000498719 LCHNA4D1U4 455 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 LRRC14BA6NHZ5 514 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 SLC15A5A6NIM6 579 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 AP3B1O00203 1094 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 CACNB4O00305 520 aaPredicted RBP9.06□□□□□ -0.96
FN1-227ENST00000498719 TRAFD1O14545 582 aaPredicted RBP9.06□□□□□ -0.96
FN1-227ENST00000498719 COPEO14579 308 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 PAPSS1O43252 624 aaPredicted RBP9.06□□□□□ -0.96
FN1-227ENST00000498719 GALR2O43603 387 aaPredicted RBP9.06□□□□□ -0.96
FN1-227ENST00000498719 CSH1P0DML2 217 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 CSH2P0DML3 217 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 CALB2P22676 271 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 ALDH9A1P49189 494 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 CREMQ03060 361 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 ZBTB16Q05516 673 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 FAM47CQ5HY64 1035 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 GLRA4Q5JXX5 417 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 FBXO47Q5MNV8 452 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 MAP3K21Q5TCX8 1036 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 ALYREFQ86V81 257 aaKnown RBP9.06□□□□□ -0.96
FN1-227ENST00000498719 SLC26A11Q86WA9 606 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 OR10H5Q8NGA6 315 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 NACC2Q96BF6 587 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 MIEF2Q96C03 454 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 CHFRQ96EP1 664 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 MVB12AQ96EY5 273 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 COG8Q96MW5 612 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 DPEP3Q9H4B8 488 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 PAK5Q9P286 719 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 SLC17A6Q9P2U8 582 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 MARCOQ9UEW3 520 aaPredicted RBP9.06□□□□□ -0.96
FN1-227ENST00000498719 MAD1L1Q9Y6D9 718 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 A0A1W2PPL8 197 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 ARHGAP10A1A4S6 786 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 HMX2A2RU54 273 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 DLX3O60479 287 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 TSPAN1O60635 241 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 WFS1O76024 890 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 HAUS5O94927 633 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 UPP2O95045 317 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 KITP10721 976 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 SDC4P31431 198 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 CPA2P48052 419 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 SLC26A2P50443 739 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 RASSF2P50749 326 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 ALDH3A2P51648 485 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 TKTL1P51854 596 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 SESN3P58005 492 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 CRADDP78560 199 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 ARHGAP1Q07960 439 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 TTLL4Q14679 1199 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 KHDC1Q4VXA5 237 aaKnown RBP9.06□□□□□ -0.96
FN1-227ENST00000498719 MDH1BQ5I0G3 518 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 MROH9Q5TGP6 573 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 POTEHQ6S545 545 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 ZNF534Q76KX8 674 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 CHSY1Q86X52 802 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 GPC2Q8N158 579 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 MIER2Q8N344 545 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 PRR18Q8N4B5 295 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 AFG1LQ8WV93 481 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 PTCD3Q96EY7 689 aaKnown RBP9.06□□□□□ -0.96
FN1-227ENST00000498719 DACH2Q96NX9 599 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 ACAP3Q96P50 834 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 NFKBIZQ9BYH8 718 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 C20orf27Q9GZN8 174 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 NMUR2Q9GZQ4 415 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 CCM2LQ9NUG4 571 aaPredicted RBP9.06□□□□□ -0.96
FN1-227ENST00000498719 DDX18Q9NVP1 670 aaKnown RBP9.06□□□□□ -0.96
FN1-227ENST00000498719 PLXNA1Q9UIW2 1896 aa9.06□□□□□ -0.96
FN1-227ENST00000498719 ARPC4-TTLL3A0A0A6YYG9 625 aa9.05□□□□□ -0.96
FN1-227ENST00000498719 ZBTB14O43829 449 aa9.05□□□□□ -0.96
FN1-227ENST00000498719 ULK1O75385 1050 aa9.05□□□□□ -0.96
FN1-227ENST00000498719 SLC25A27O95847 323 aa9.05□□□□□ -0.96
FN1-227ENST00000498719 ATP5BP06576 529 aaKnown RBP9.05□□□□□ -0.96
FN1-227ENST00000498719 CYP2F1P24903 491 aa9.05□□□□□ -0.96
FN1-227ENST00000498719 ERFP50548 548 aa9.05□□□□□ -0.96
FN1-227ENST00000498719 CCR5P51681 352 aa9.05□□□□□ -0.96
FN1-227ENST00000498719 IRX4P78413 519 aa9.05□□□□□ -0.96
FN1-227ENST00000498719 RBP5P82980 135 aa9.05□□□□□ -0.96
FN1-227ENST00000498719 CDK16Q00536 496 aa9.05□□□□□ -0.96
FN1-227ENST00000498719 BST1Q10588 318 aa9.05□□□□□ -0.96
FN1-227ENST00000498719 SP140Q13342 867 aa9.05□□□□□ -0.96
FN1-227ENST00000498719 FAM187BQ17R55 369 aa9.05□□□□□ -0.96
FN1-227ENST00000498719 SLC9A4Q6AI14 798 aa9.05□□□□□ -0.96
FN1-227ENST00000498719 ZCCHC23Q6ZST2 131 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms