RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 LTFP02788 710 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 ZFXP17010 805 aaPredicted RBP5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 LAG3P18627 525 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 CTNNB1P35222 781 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 RDXP35241 583 aaKnown RBP5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 CDKN2BP42772 138 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 MAGEA11P43364 429 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 NRIP1P48552 1158 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 SULT1E1P49888 294 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 GATMP50440 423 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 ZNF135P52742 658 aaPredicted RBP5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 CDH6P55285 790 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 BCAR1P56945 870 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 SHC2P98077 582 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 SLC25A11Q02978 314 aaKnown RBP5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 DEUP1Q05D60 604 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 ADCY1Q08828 1119 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 GPR17Q13304 367 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 KLF1Q13351 362 aaPredicted RBP5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 BTG3Q14201 252 aaPredicted RBP5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 HLTFQ14527 1009 aaKnown RBP eCLIP5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 PPP1R7Q15435 360 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 SIX1Q15475 284 aaPredicted RBP5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 TERF2Q15554 542 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 TAZQ16635 292 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 C15orf59Q2T9L4 293 aaPredicted RBP5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 USP41Q3LFD5 358 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 ARL13BQ3SXY8 428 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 SLC39A12Q504Y0 691 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 DCAF6Q58WW2 860 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 KCNT1Q5JUK3 1230 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 BEND6Q5SZJ8 279 aaPredicted RBP5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 N4BP2L1Q5TBK1 243 aaPredicted RBP5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 DAB2IPQ5VWQ8 1189 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 BTBD8Q5XKL5 378 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 KAZNQ674X7 775 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 PM20D1Q6GTS8 502 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 KIAA1841Q6NSI8 718 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 DRICH1Q6PGQ1 229 aaPredicted RBP5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 BEND5Q7L4P6 421 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 GSTA5Q7RTV2 222 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 LRRTM3Q86VH5 581 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 RFX6Q8HWS3 928 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 SCN4BQ8IWT1 228 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 CMTR2Q8IYT2 770 aaKnown RBP5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 NUP93Q8N1F7 819 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 ARHGAP18Q8N392 663 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 ARFGAP1Q8N6T3 406 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 BBOF1Q8ND07 529 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 ZMIZ2Q8NF64 920 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 OR10T2Q8NGX3 314 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 CCHCR1Q8TD31 782 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 CLEC4CQ8WTT0 213 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 HDAC7Q8WUI4 952 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 RAPGEF5Q92565 580 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 HSPH1Q92598 858 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 SLCO2A1Q92959 643 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 PGAP3Q96FM1 320 aaPredicted RBP5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 PIWIL1Q96J94 861 aaKnown RBP5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 C8orf48Q96LL4 319 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 ZNF558Q96NG5 402 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 SLC2A13Q96QE2 648 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 TMEM209Q96SK2 561 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 KCNK16Q96T55 309 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 YME1L1Q96TA2 773 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 NPY6RQ99463 290 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 PKMYT1Q99640 499 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 TTPALQ9BTX7 342 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 CALN1Q9BXU9 219 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 FAM129AQ9BZQ8 928 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 DCLK3Q9C098 648 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 LMAN2LQ9H0V9 348 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 S1PR5Q9H228 398 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 FBXO44Q9H4M3 255 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 ABCC13Q9NSE7 274 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 COMMD8Q9NX08 183 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 NCDNQ9UBB6 729 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 STK39Q9UEW8 545 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 ZNF148Q9UQR1 794 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 NR2E1Q9Y466 385 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 TTC3P53804 2025 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 WDFY3Q8IZQ1 3526 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 TCRBV7S2A1N4TA0A589 114 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 YJEFN3A6XGL0 299 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 C2CD4DB7Z1M9 353 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 E7ENQ6 273 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 F8W810 466 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 APOC4-APOC2K7ER74 178 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 SHOXO15266 292 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 DAPK3O43293 454 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 LIASO43766 372 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 CST8O60676 142 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 ZNF189O75820 626 aaPredicted RBP5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 SEC31AO94979 1220 aaKnown RBP5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 RTN3O95197 1032 aaPredicted RBP5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 APOC2P02655 101 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 KRT10P13645 584 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 TCF4P15884 667 aa5.45□□□□□ -1.54
HMGXB4-208ENST00000498325 TGM2P21980 687 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms