RNA–Protein interactions for RNA: ENST00000498160.5

CTDSP1-215, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-215ENST00000498160 SUV39H2Q9H5I1 410 aa17.75■□□□□ 0.43
CTDSP1-215ENST00000498160 CD248Q9HCU0 757 aa17.75■□□□□ 0.43
CTDSP1-215ENST00000498160 RAB6BQ9NRW1 208 aa17.75■□□□□ 0.43
CTDSP1-215ENST00000498160 ASIC3Q9UHC3 531 aa17.75■□□□□ 0.43
CTDSP1-215ENST00000498160 NEU2Q9Y3R4 380 aa17.75■□□□□ 0.43
CTDSP1-215ENST00000498160 CCDC163A0A0D9SF12 145 aa17.74■□□□□ 0.43
CTDSP1-215ENST00000498160 SLC7A4O43246 635 aa17.74■□□□□ 0.43
CTDSP1-215ENST00000498160 HTRA2O43464 458 aaPredicted RBP17.74■□□□□ 0.43
CTDSP1-215ENST00000498160 ZNF217O75362 1048 aa17.74■□□□□ 0.43
CTDSP1-215ENST00000498160 LEFTY1O75610 366 aa17.74■□□□□ 0.43
CTDSP1-215ENST00000498160 IL1BP01584 269 aa17.74■□□□□ 0.43
CTDSP1-215ENST00000498160 LMAN1P49257 510 aa17.74■□□□□ 0.43
CTDSP1-215ENST00000498160 COPAP53621 1224 aa17.74■□□□□ 0.43
CTDSP1-215ENST00000498160 SKOR1P84550 965 aa17.74■□□□□ 0.43
CTDSP1-215ENST00000498160 GPS1Q13098 491 aa17.74■□□□□ 0.43
CTDSP1-215ENST00000498160 MTAPQ13126 283 aa17.74■□□□□ 0.43
CTDSP1-215ENST00000498160 GAS6Q14393 721 aa17.74■□□□□ 0.43
CTDSP1-215ENST00000498160 CST6Q15828 149 aa17.74■□□□□ 0.43
CTDSP1-215ENST00000498160 GRIN3AQ8TCU5 1115 aa17.74■□□□□ 0.43
CTDSP1-215ENST00000498160 RBM15Q96T37 977 aaKnown RBP eCLIP17.74■□□□□ 0.431e-6■■■□□ 15.5
CTDSP1-215ENST00000498160 C1QTNF1Q9BXJ1 281 aa17.74■□□□□ 0.43
CTDSP1-215ENST00000498160 COL25A1Q9BXS0 654 aaPredicted RBP17.74■□□□□ 0.43
CTDSP1-215ENST00000498160 TDRD1Q9BXT4 1180 aaKnown RBP17.74■□□□□ 0.43
CTDSP1-215ENST00000498160 HDAC8Q9BY41 377 aa17.74■□□□□ 0.43
CTDSP1-215ENST00000498160 FRMD8Q9BZ67 464 aaPredicted RBP17.74■□□□□ 0.43
CTDSP1-215ENST00000498160 ZDHHC4Q9NPG8 344 aa17.74■□□□□ 0.43
CTDSP1-215ENST00000498160 SPATA6Q9NWH7 488 aaPredicted RBP17.74■□□□□ 0.43
CTDSP1-215ENST00000498160 BCCIPQ9P287 314 aaKnown RBP eCLIP17.74■□□□□ 0.43
CTDSP1-215ENST00000498160 EBF1Q9UH73 591 aa17.74■□□□□ 0.43
CTDSP1-215ENST00000498160 NCKAP1Q9Y2A7 1128 aa17.74■□□□□ 0.43
CTDSP1-215ENST00000498160 RAI2Q9Y5P3 530 aa17.74■□□□□ 0.43
CTDSP1-215ENST00000498160 KPNA3O00505 521 aaPredicted RBP17.73■□□□□ 0.43
CTDSP1-215ENST00000498160 LAMTOR5O43504 91 aa17.73■□□□□ 0.43
CTDSP1-215ENST00000498160 AP2A1O95782 977 aa17.73■□□□□ 0.43
CTDSP1-215ENST00000498160 PDGFBP01127 241 aaPredicted RBP17.73■□□□□ 0.43
CTDSP1-215ENST00000498160 UGT2B4P06133 528 aa17.73■□□□□ 0.43
CTDSP1-215ENST00000498160 HLA-DPA1P20036 260 aa17.73■□□□□ 0.43
CTDSP1-215ENST00000498160 TPSB2P20231 275 aa17.73■□□□□ 0.43
CTDSP1-215ENST00000498160 XPAP23025 273 aaPredicted RBP17.73■□□□□ 0.43
CTDSP1-215ENST00000498160 ADCY8P40145 1251 aa17.73■□□□□ 0.43
CTDSP1-215ENST00000498160 MAGEA6P43360 314 aa17.73■□□□□ 0.43
CTDSP1-215ENST00000498160 BASP1P80723 227 aaKnown RBP17.73■□□□□ 0.43
CTDSP1-215ENST00000498160 CDK18Q07002 472 aa17.73■□□□□ 0.43
CTDSP1-215ENST00000498160 NIPAL4Q0D2K0 466 aa17.73■□□□□ 0.43
CTDSP1-215ENST00000498160 TPSAB1Q15661 275 aa17.73■□□□□ 0.43
CTDSP1-215ENST00000498160 ARSIQ5FYB1 569 aa17.73■□□□□ 0.43
CTDSP1-215ENST00000498160 KIAA1211LQ6NV74 962 aa17.73■□□□□ 0.43
CTDSP1-215ENST00000498160 PKN3Q6P5Z2 889 aa17.73■□□□□ 0.43
CTDSP1-215ENST00000498160 TMEM92Q6UXU6 159 aa17.73■□□□□ 0.43
CTDSP1-215ENST00000498160 PRPF39Q86UA1 669 aaKnown RBP17.73■□□□□ 0.43
CTDSP1-215ENST00000498160 MMAAQ8IVH4 418 aaKnown RBP17.73■□□□□ 0.43
CTDSP1-215ENST00000498160 CHST14Q8NCH0 376 aa17.73■□□□□ 0.43
CTDSP1-215ENST00000498160 ECHDC3Q96DC8 303 aa17.73■□□□□ 0.43
CTDSP1-215ENST00000498160 FAM129AQ9BZQ8 928 aa17.73■□□□□ 0.43
CTDSP1-215ENST00000498160 PABPC3Q9H361 631 aaKnown RBP17.73■□□□□ 0.43
CTDSP1-215ENST00000498160 MTG2Q9H4K7 406 aa17.73■□□□□ 0.43
CTDSP1-215ENST00000498160 FZD4Q9ULV1 537 aa17.73■□□□□ 0.43
CTDSP1-215ENST00000498160 PHTF1Q9UMS5 762 aa17.73■□□□□ 0.43
CTDSP1-215ENST00000498160 PRR33A8MZF0 331 aa17.72■□□□□ 0.43
CTDSP1-215ENST00000498160 TRAFD1O14545 582 aaPredicted RBP17.72■□□□□ 0.43
CTDSP1-215ENST00000498160 TTI1O43156 1089 aa17.72■□□□□ 0.43
CTDSP1-215ENST00000498160 RAD51CO43502 376 aa17.72■□□□□ 0.43
CTDSP1-215ENST00000498160 GPR37L1O60883 481 aa17.72■□□□□ 0.43
CTDSP1-215ENST00000498160 PGLSO95336 258 aa17.72■□□□□ 0.43
CTDSP1-215ENST00000498160 SLU7O95391 586 aaKnown RBP17.72■□□□□ 0.43
CTDSP1-215ENST00000498160 METTL18O95568 372 aa17.72■□□□□ 0.43
CTDSP1-215ENST00000498160 NDST3O95803 873 aa17.72■□□□□ 0.43
CTDSP1-215ENST00000498160 CPP00450 1065 aa17.72■□□□□ 0.43
CTDSP1-215ENST00000498160 FGF1P05230 155 aa17.72■□□□□ 0.43
CTDSP1-215ENST00000498160 MMP2P08253 660 aa17.72■□□□□ 0.43
CTDSP1-215ENST00000498160 COL9A1P20849 921 aa17.72■□□□□ 0.43
CTDSP1-215ENST00000498160 SLC8A1P32418 973 aa17.72■□□□□ 0.43
CTDSP1-215ENST00000498160 GRIA4P48058 902 aa17.72■□□□□ 0.43
CTDSP1-215ENST00000498160 PSMD8P48556 350 aa17.72■□□□□ 0.43
CTDSP1-215ENST00000498160 NEK3P51956 506 aa17.72■□□□□ 0.43
CTDSP1-215ENST00000498160 EPHB1P54762 984 aa17.72■□□□□ 0.43
CTDSP1-215ENST00000498160 RPS14P62263 151 aaKnown RBP17.72■□□□□ 0.43
CTDSP1-215ENST00000498160 ELP6Q0PNE2 266 aa17.72■□□□□ 0.43
CTDSP1-215ENST00000498160 ARMC3Q5W041 872 aa17.72■□□□□ 0.43
CTDSP1-215ENST00000498160 KDELC1Q6UW63 502 aa17.72■□□□□ 0.43
CTDSP1-215ENST00000498160 PPP1R21Q6ZMI0 780 aa17.72■□□□□ 0.43
CTDSP1-215ENST00000498160 HOOK3Q86VS8 718 aa17.72■□□□□ 0.43
CTDSP1-215ENST00000498160 RASSF3Q86WH2 238 aa17.72■□□□□ 0.43
CTDSP1-215ENST00000498160 OR6K2Q8NGY2 324 aa17.72■□□□□ 0.43
CTDSP1-215ENST00000498160 SNF8Q96H20 258 aa17.72■□□□□ 0.43
CTDSP1-215ENST00000498160 MRGPRX1Q96LB2 322 aa17.72■□□□□ 0.43
CTDSP1-215ENST00000498160 KLHL32Q96NJ5 620 aa17.72■□□□□ 0.43
CTDSP1-215ENST00000498160 ERP44Q9BS26 406 aa17.72■□□□□ 0.43
CTDSP1-215ENST00000498160 FAM126AQ9BYI3 521 aaPredicted RBP17.72■□□□□ 0.43
CTDSP1-215ENST00000498160 MKRN2Q9H000 416 aaKnown RBP17.72■□□□□ 0.43
CTDSP1-215ENST00000498160 ETNK1Q9HBU6 452 aa17.72■□□□□ 0.43
CTDSP1-215ENST00000498160 PRMT8Q9NR22 394 aaPredicted RBP17.72■□□□□ 0.43
CTDSP1-215ENST00000498160 FBXO4Q9UKT5 387 aa17.72■□□□□ 0.43
CTDSP1-215ENST00000498160 TPX2Q9ULW0 747 aaKnown RBP17.72■□□□□ 0.43
CTDSP1-215ENST00000498160 EFCAB8A8MWE9 144 aa17.71■□□□□ 0.43
CTDSP1-215ENST00000498160 SUN1O94901 812 aa17.71■□□□□ 0.43
CTDSP1-215ENST00000498160 PIGNO95427 931 aa17.71■□□□□ 0.43
CTDSP1-215ENST00000498160 CTSLP07711 333 aa17.71■□□□□ 0.43
CTDSP1-215ENST00000498160 ETS1P14921 441 aa17.71■□□□□ 0.43
CTDSP1-215ENST00000498160 GABRG2P18507 467 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms