RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 PACRGLQ8N7B6 248 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 OR2A12Q8NGT7 310 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 SHKBP1Q8TBC3 707 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 PIGOQ8TEQ8 1089 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 DLG3Q92796 817 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 PTX4Q96A99 478 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 CIDECQ96AQ7 238 aaPredicted RBP1.46□□□□□ -2.18
XRN1-214ENST00000498077 C12orf43Q96C57 262 aaKnown RBP1.46□□□□□ -2.18
XRN1-214ENST00000498077 ZNF560Q96MR9 790 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 RBP7Q96R05 134 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 TSPAN10Q9H1Z9 355 aaPredicted RBP1.46□□□□□ -2.18
XRN1-214ENST00000498077 TMEM38AQ9H6F2 299 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 VEZTQ9HBM0 779 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 GBA2Q9HCG7 927 aaPredicted RBP1.46□□□□□ -2.18
XRN1-214ENST00000498077 IFT57Q9NWB7 429 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 GPR83Q9NYM4 423 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 ZNF346Q9UL40 294 aaKnown RBP1.46□□□□□ -2.18
XRN1-214ENST00000498077 SLC45A2Q9UMX9 530 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 LZTS1Q9Y250 596 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 TLR6Q9Y2C9 796 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 USP31Q70CQ4 1352 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 TECPR2O15040 1411 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 DOPEY2Q9Y3R5 2298 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 ZNF840PA6NDX5 716 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 TRIM75PA6NK02 468 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 ALG1L2C9J202 215 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 GTPBP1O00178 669 aaKnown RBP1.46□□□□□ -2.18
XRN1-214ENST00000498077 TRIM38O00635 465 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 KLF11O14901 512 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 PPIP5K2O43314 1243 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 ZG16O60844 167 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 TMCC2O75069 709 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 GPR32O75388 356 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 RBBP9O75884 186 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 GUCA1CO95843 209 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 SEMG1P04279 462 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 FABP3P05413 133 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 DBHP09172 617 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 SRFP11831 508 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 XRCC6P12956 609 aaKnown RBP eCLIP1.46□□□□□ -2.18
XRN1-214ENST00000498077 RPL17P18621 184 aaKnown RBP1.46□□□□□ -2.18
XRN1-214ENST00000498077 MSH3P20585 1137 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 TGM1P22735 817 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 KIF5BP33176 963 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 ELK3P41970 407 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 SLC12A3P55017 1021 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 LILRA4P59901 499 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 HSD11B2P80365 405 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 SLAQ13239 276 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 CCNIQ14094 377 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 SEPT2Q15019 361 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 ANKRD39Q53RE8 183 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 FAM102AQ5T9C2 384 aaPredicted RBP1.46□□□□□ -2.18
XRN1-214ENST00000498077 AGBL2Q5U5Z8 902 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 ALS2CLQ60I27 953 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 TTI2Q6NXR4 508 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 CNIH2Q6PI25 160 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 PLEKHG7Q6ZR37 379 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 PPP1R3FQ6ZSY5 799 aaPredicted RBP1.46□□□□□ -2.18
XRN1-214ENST00000498077 UTS2BQ765I0 119 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 NLRP9Q7RTR0 991 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 TMPRSS7Q7RTY8 843 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 PTAR1Q7Z6K3 402 aaPredicted RBP1.46□□□□□ -2.18
XRN1-214ENST00000498077 RASSF3Q86WH2 238 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 ERO1BQ86YB8 467 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 GPC2Q8N158 579 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 TXLNBQ8N3L3 684 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 OR52B6Q8NGF0 335 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 HELQQ8TDG4 1101 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 BRIX1Q8TDN6 353 aaKnown RBP1.46□□□□□ -2.18
XRN1-214ENST00000498077 TRAPPC12Q8WVT3 735 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 FAM168AQ92567 244 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 RNF34Q969K3 372 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 TMEM209Q96SK2 561 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 SPAG8Q99932 426 aaPredicted RBP1.46□□□□□ -2.18
XRN1-214ENST00000498077 OCSTAMPQ9BR26 566 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 PLCD4Q9BRC7 762 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 SPRTNQ9H040 489 aaPredicted RBP1.46□□□□□ -2.18
XRN1-214ENST00000498077 GGNBP2Q9H3C7 697 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 SUGCTQ9HAC7 445 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 TXNRD2Q9NNW7 524 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 NGRNQ9NPE2 291 aaKnown RBP1.46□□□□□ -2.18
XRN1-214ENST00000498077 IFT46Q9NQC8 304 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 AASDHPPTQ9NRN7 309 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 SLC38A7Q9NVC3 462 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 GGA3Q9NZ52 723 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 ADA2Q9NZK5 511 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 ERVK-18Q9QC07 812 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 PGAP2Q9UHJ9 254 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 SERTAD3Q9UJW9 196 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 CPSF3Q9UKF6 684 aaKnown RBP1.46□□□□□ -2.18
XRN1-214ENST00000498077 DHDHQ9UQ10 334 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 GPR55Q9Y2T6 319 aaPredicted RBP1.46□□□□□ -2.18
XRN1-214ENST00000498077 SNCAIPQ9Y6H5 919 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 IKBKGQ9Y6K9 419 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 MYO5BQ9ULV0 1848 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 CADP27708 2225 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 ARAP2Q8WZ64 1704 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 ACACAQ13085 2346 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 IQGAP3Q86VI3 1631 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms