RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 FBXO43Q4G163 708 aa3.04□□□□□ -1.92
RIF1-212ENST00000498041 FSCBQ5H9T9 825 aa3.04□□□□□ -1.92
RIF1-212ENST00000498041 FNBP1LQ5T0N5 605 aa3.04□□□□□ -1.92
RIF1-212ENST00000498041 ATG16L1Q676U5 607 aa3.04□□□□□ -1.92
RIF1-212ENST00000498041 IL20RBQ6UXL0 311 aa3.04□□□□□ -1.92
RIF1-212ENST00000498041 FAM83HQ6ZRV2 1179 aaPredicted RBP3.04□□□□□ -1.92
RIF1-212ENST00000498041 Q6ZSV7 163 aa3.04□□□□□ -1.92
RIF1-212ENST00000498041 PRSS45Q7RTY3 260 aa3.04□□□□□ -1.92
RIF1-212ENST00000498041 LRRTM4Q86VH4 590 aa3.04□□□□□ -1.92
RIF1-212ENST00000498041 CPOQ8IVL8 374 aa3.04□□□□□ -1.92
RIF1-212ENST00000498041 SMAP1Q8IYB5 467 aaPredicted RBP3.04□□□□□ -1.92
RIF1-212ENST00000498041 RBFAQ8N0V3 343 aa3.04□□□□□ -1.92
RIF1-212ENST00000498041 FBXL14Q8N1E6 418 aa3.04□□□□□ -1.92
RIF1-212ENST00000498041 ZMIZ2Q8NF64 920 aa3.04□□□□□ -1.92
RIF1-212ENST00000498041 RFWD2Q8NHY2 731 aa3.04□□□□□ -1.92
RIF1-212ENST00000498041 RAB40AQ8WXH6 277 aa3.04□□□□□ -1.92
RIF1-212ENST00000498041 THOC3Q96J01 351 aaKnown RBP3.04□□□□□ -1.92
RIF1-212ENST00000498041 APOLD1Q96LR9 279 aa3.04□□□□□ -1.92
RIF1-212ENST00000498041 CLSTN3Q9BQT9 956 aa3.04□□□□□ -1.92
RIF1-212ENST00000498041 TMEM204Q9BSN7 226 aa3.04□□□□□ -1.92
RIF1-212ENST00000498041 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.04□□□□□ -1.92
RIF1-212ENST00000498041 DCLK3Q9C098 648 aa3.04□□□□□ -1.92
RIF1-212ENST00000498041 MROH8Q9H579 483 aa3.04□□□□□ -1.92
RIF1-212ENST00000498041 WDR6Q9NNW5 1121 aaKnown RBP3.04□□□□□ -1.92
RIF1-212ENST00000498041 IL36RNQ9UBH0 155 aa3.04□□□□□ -1.92
RIF1-212ENST00000498041 FZD10Q9ULW2 581 aa3.04□□□□□ -1.92
RIF1-212ENST00000498041 SRPRBQ9Y5M8 271 aaKnown RBP3.04□□□□□ -1.92
RIF1-212ENST00000498041 RAI2Q9Y5P3 530 aa3.04□□□□□ -1.92
RIF1-212ENST00000498041 PTGDR2Q9Y5Y4 395 aa3.04□□□□□ -1.92
RIF1-212ENST00000498041 RICTORQ6R327 1708 aa3.04□□□□□ -1.92
RIF1-212ENST00000498041 CLTCL1P53675 1640 aa3.04□□□□□ -1.92
RIF1-212ENST00000498041 MAP3K4Q9Y6R4 1608 aa3.04□□□□□ -1.92
RIF1-212ENST00000498041 DIP2BQ9P265 1576 aa3.04□□□□□ -1.92
RIF1-212ENST00000498041 ADGRL1O94910 1474 aa3.03□□□□□ -1.92
RIF1-212ENST00000498041 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.03□□□□□ -1.92
RIF1-212ENST00000498041 IGKV2D-30A0A075B6S6 120 aa3.03□□□□□ -1.92
RIF1-212ENST00000498041 C17orf113A0A1B0GUU1 675 aa3.03□□□□□ -1.92
RIF1-212ENST00000498041 A0A1B0GVT2 93 aa3.03□□□□□ -1.92
RIF1-212ENST00000498041 PER2O15055 1255 aa3.03□□□□□ -1.92
RIF1-212ENST00000498041 LDB2O43679 373 aa3.03□□□□□ -1.92
RIF1-212ENST00000498041 GUCY1B2O75343 617 aa3.03□□□□□ -1.92
RIF1-212ENST00000498041 T-ENOLP0DO92 83 aa3.03□□□□□ -1.92
RIF1-212ENST00000498041 CCKARP32238 428 aa3.03□□□□□ -1.92
RIF1-212ENST00000498041 PGM1P36871 562 aa3.03□□□□□ -1.92
RIF1-212ENST00000498041 GPD2P43304 727 aa3.03□□□□□ -1.92
RIF1-212ENST00000498041 CENPAP49450 140 aa3.03□□□□□ -1.92
RIF1-212ENST00000498041 RGS19P49795 217 aa3.03□□□□□ -1.92
RIF1-212ENST00000498041 CCR5P51681 352 aa3.03□□□□□ -1.92
RIF1-212ENST00000498041 PMS2P54278 862 aa3.03□□□□□ -1.92
RIF1-212ENST00000498041 NANOS2P60321 138 aaKnown RBP3.03□□□□□ -1.92
RIF1-212ENST00000498041 KRTAP10-6P60371 365 aaPredicted RBP3.03□□□□□ -1.92
RIF1-212ENST00000498041 TLE2Q04725 743 aa3.03□□□□□ -1.92
RIF1-212ENST00000498041 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.03□□□□□ -1.92
RIF1-212ENST00000498041 DSC1Q08554 894 aa3.03□□□□□ -1.92
RIF1-212ENST00000498041 EDRF1Q3B7T1 1238 aa3.03□□□□□ -1.92
RIF1-212ENST00000498041 TMEM95Q3KNT9 176 aa3.03□□□□□ -1.92
RIF1-212ENST00000498041 MON1BQ7L1V2 547 aa3.03□□□□□ -1.92
RIF1-212ENST00000498041 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.03□□□□□ -1.92
RIF1-212ENST00000498041 ADGRG6Q86SQ4 1221 aa3.03□□□□□ -1.92
RIF1-212ENST00000498041 PATL1Q86TB9 770 aaKnown RBP3.03□□□□□ -1.92
RIF1-212ENST00000498041 CPXM2Q8N436 756 aa3.03□□□□□ -1.92
RIF1-212ENST00000498041 IQCF1Q8N6M8 205 aa3.03□□□□□ -1.92
RIF1-212ENST00000498041 PRR26Q8N8Z3 221 aa3.03□□□□□ -1.92
RIF1-212ENST00000498041 LSM14AQ8ND56 463 aaKnown RBP3.03□□□□□ -1.92
RIF1-212ENST00000498041 MCPH1Q8NEM0 835 aa3.03□□□□□ -1.92
RIF1-212ENST00000498041 RASSF8Q8NHQ8 419 aa3.03□□□□□ -1.92
RIF1-212ENST00000498041 NOC3LQ8WTT2 800 aaKnown RBP3.03□□□□□ -1.92
RIF1-212ENST00000498041 TBC1D22AQ8WUA7 517 aa3.03□□□□□ -1.92
RIF1-212ENST00000498041 TMEM170AQ8WVE7 144 aa3.03□□□□□ -1.92
RIF1-212ENST00000498041 USP13Q92995 863 aaPredicted RBP3.03□□□□□ -1.92
RIF1-212ENST00000498041 TMEM18Q96B42 140 aa3.03□□□□□ -1.92
RIF1-212ENST00000498041 MAELQ96JY0 434 aaKnown RBP3.03□□□□□ -1.92
RIF1-212ENST00000498041 KRTAP1-5Q9BYS1 174 aa3.03□□□□□ -1.92
RIF1-212ENST00000498041 LHPPQ9H008 270 aa3.03□□□□□ -1.92
RIF1-212ENST00000498041 LMAN2LQ9H0V9 348 aa3.03□□□□□ -1.92
RIF1-212ENST00000498041 HIPK2Q9H2X6 1198 aa3.03□□□□□ -1.92
RIF1-212ENST00000498041 EPHX3Q9H6B9 360 aa3.03□□□□□ -1.92
RIF1-212ENST00000498041 TMEM160Q9NX00 188 aa3.03□□□□□ -1.92
RIF1-212ENST00000498041 IFT80Q9P2H3 777 aaPredicted RBP3.03□□□□□ -1.92
RIF1-212ENST00000498041 MYO6Q9UM54 1294 aa3.03□□□□□ -1.92
RIF1-212ENST00000498041 ARHGEF5Q12774 1597 aa3.03□□□□□ -1.92
RIF1-212ENST00000498041 PRDM15P57071 1507 aaPredicted RBP3.03□□□□□ -1.92
RIF1-212ENST00000498041 FAM135AQ9P2D6 1515 aa3.03□□□□□ -1.92
RIF1-212ENST00000498041 ADGRL2O95490 1459 aa3.03□□□□□ -1.93
RIF1-212ENST00000498041 CCDC141Q6ZP82 1450 aa3.03□□□□□ -1.93
RIF1-212ENST00000498041 TEX14Q8IWB6 1497 aa3.03□□□□□ -1.93
RIF1-212ENST00000498041 ANKRD30AQ9BXX3 1397 aa3.02□□□□□ -1.93
RIF1-212ENST00000498041 CLTCQ00610 1675 aaKnown RBP3.02□□□□□ -1.93
RIF1-212ENST00000498041 GOLGA6L10A0A0M3HER8 536 aa3.02□□□□□ -1.93
RIF1-212ENST00000498041 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.02□□□□□ -1.93
RIF1-212ENST00000498041 ARHGAP10A1A4S6 786 aa3.02□□□□□ -1.93
RIF1-212ENST00000498041 LACTBL1A8MY62 500 aa3.02□□□□□ -1.93
RIF1-212ENST00000498041 ASAP2O43150 1006 aa3.02□□□□□ -1.93
RIF1-212ENST00000498041 SLC25A17O43808 307 aa3.02□□□□□ -1.93
RIF1-212ENST00000498041 CEP104O60308 925 aa3.02□□□□□ -1.93
RIF1-212ENST00000498041 NGFRP08138 427 aa3.02□□□□□ -1.93
RIF1-212ENST00000498041 IFIT1P09914 478 aaKnown RBP3.02□□□□□ -1.93
RIF1-212ENST00000498041 NAGAP17050 411 aa3.02□□□□□ -1.93
RIF1-212ENST00000498041 CTPS1P17812 591 aa3.02□□□□□ -1.93
RIF1-212ENST00000498041 CNTFP26441 200 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms