RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 NUDCD1Q96RS6 583 aa20.28■□□□□ 0.84
CTSD-206ENST00000497544 MKRN2Q9H000 416 aaKnown RBP20.28■□□□□ 0.84
CTSD-206ENST00000497544 ZDHHC6Q9H6R6 413 aa20.28■□□□□ 0.84
CTSD-206ENST00000497544 CD248Q9HCU0 757 aa20.28■□□□□ 0.84
CTSD-206ENST00000497544 C1QTNF3-AMACRE9PGA6 284 aa20.27■□□□□ 0.84
CTSD-206ENST00000497544 INSIG1O15503 277 aa20.27■□□□□ 0.84
CTSD-206ENST00000497544 PAPSS2O95340 614 aaPredicted RBP20.27■□□□□ 0.84
CTSD-206ENST00000497544 DNTTP04053 509 aa20.27■□□□□ 0.84
CTSD-206ENST00000497544 ITGAVP06756 1048 aa20.27■□□□□ 0.84
CTSD-206ENST00000497544 ACADMP11310 421 aa20.27■□□□□ 0.84
CTSD-206ENST00000497544 GABRG2P18507 467 aa20.27■□□□□ 0.84
CTSD-206ENST00000497544 MAPK8P45983 427 aa20.27■□□□□ 0.84
CTSD-206ENST00000497544 AP1S1P61966 158 aa20.27■□□□□ 0.84
CTSD-206ENST00000497544 RPS14P62263 151 aaKnown RBP20.27■□□□□ 0.84
CTSD-206ENST00000497544 OASLQ15646 514 aaKnown RBP20.27■□□□□ 0.84
CTSD-206ENST00000497544 RALGPS1Q5JS13 557 aa20.27■□□□□ 0.84
CTSD-206ENST00000497544 FAM182AQ5T1J6 154 aa20.27■□□□□ 0.84
CTSD-206ENST00000497544 KIAA1324Q6UXG2 1013 aaKnown RBP20.27■□□□□ 0.84
CTSD-206ENST00000497544 ZNF567Q8N184 647 aa20.27■□□□□ 0.84
CTSD-206ENST00000497544 FAM71DQ8N9W8 422 aa20.27■□□□□ 0.84
CTSD-206ENST00000497544 TMIEQ8NEW7 156 aa20.27■□□□□ 0.84
CTSD-206ENST00000497544 ATL2Q8NHH9 583 aa20.27■□□□□ 0.84
CTSD-206ENST00000497544 PIP4K2CQ8TBX8 421 aa20.27■□□□□ 0.84
CTSD-206ENST00000497544 GRIN3AQ8TCU5 1115 aa20.27■□□□□ 0.84
CTSD-206ENST00000497544 MRGPRX1Q96LB2 322 aa20.27■□□□□ 0.84
CTSD-206ENST00000497544 SEMA3CQ99985 751 aa20.27■□□□□ 0.84
CTSD-206ENST00000497544 CPEB1Q9BZB8 566 aaKnown RBP20.27■□□□□ 0.84
CTSD-206ENST00000497544 CDC23Q9UJX2 597 aa20.27■□□□□ 0.84
CTSD-206ENST00000497544 PPM1HQ9ULR3 514 aa20.27■□□□□ 0.84
CTSD-206ENST00000497544 IGF2RP11717 2491 aa20.26■□□□□ 0.83
CTSD-206ENST00000497544 TTC24A2A3L6 582 aaPredicted RBP20.26■□□□□ 0.83
CTSD-206ENST00000497544 ZNF500O60304 480 aaPredicted RBP20.26■□□□□ 0.83
CTSD-206ENST00000497544 LEFTY1O75610 366 aa20.26■□□□□ 0.83
CTSD-206ENST00000497544 CR2P20023 1033 aa20.26■□□□□ 0.83
CTSD-206ENST00000497544 GKP32189 559 aa20.26■□□□□ 0.83
CTSD-206ENST00000497544 SLC8A1P32418 973 aa20.26■□□□□ 0.83
CTSD-206ENST00000497544 ACTN2P35609 894 aa20.26■□□□□ 0.83
CTSD-206ENST00000497544 KCNJ1P48048 391 aa20.26■□□□□ 0.83
CTSD-206ENST00000497544 TUBB2AQ13885 445 aa20.26■□□□□ 0.83
CTSD-206ENST00000497544 CST6Q15828 149 aa20.26■□□□□ 0.83
CTSD-206ENST00000497544 CYP1B1Q16678 543 aa20.26■□□□□ 0.83
CTSD-206ENST00000497544 ANKRD20A2Q5SQ80 823 aa20.26■□□□□ 0.83
CTSD-206ENST00000497544 ANKRD20A1Q5TYW2 823 aa20.26■□□□□ 0.83
CTSD-206ENST00000497544 ANKRD20A3Q5VUR7 823 aa20.26■□□□□ 0.83
CTSD-206ENST00000497544 ITPRIPL1Q6GPH6 555 aa20.26■□□□□ 0.83
CTSD-206ENST00000497544 NCEH1Q6PIU2 408 aa20.26■□□□□ 0.83
CTSD-206ENST00000497544 GSTA5Q7RTV2 222 aa20.26■□□□□ 0.83
CTSD-206ENST00000497544 ZNF419Q96HQ0 510 aaPredicted RBP20.26■□□□□ 0.83
CTSD-206ENST00000497544 TUBGCP5Q96RT8 1024 aa20.26■□□□□ 0.83
CTSD-206ENST00000497544 TUBB2BQ9BVA1 445 aa20.26■□□□□ 0.83
CTSD-206ENST00000497544 SLC6A17Q9H1V8 727 aa20.26■□□□□ 0.83
CTSD-206ENST00000497544 GLOD4Q9HC38 313 aa20.26■□□□□ 0.83
CTSD-206ENST00000497544 WASF2Q9Y6W5 498 aa20.26■□□□□ 0.83
CTSD-206ENST00000497544 FLNBO75369 2602 aaKnown RBP20.26■□□□□ 0.83
CTSD-206ENST00000497544 ANKRD36A6QL64 1941 aa20.25■□□□□ 0.83
CTSD-206ENST00000497544 WDFY3Q8IZQ1 3526 aa20.25■□□□□ 0.83
CTSD-206ENST00000497544 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.25■□□□□ 0.83
CTSD-206ENST00000497544 C5orf60A6NFR6 353 aa20.25■□□□□ 0.83
CTSD-206ENST00000497544 C1QTNF9BB2RNN3 333 aa20.25■□□□□ 0.83
CTSD-206ENST00000497544 K7ESF4 209 aa20.25■□□□□ 0.83
CTSD-206ENST00000497544 PDE2AO00408 941 aaPredicted RBP20.25■□□□□ 0.83
CTSD-206ENST00000497544 KPNA3O00505 521 aaPredicted RBP20.25■□□□□ 0.83
CTSD-206ENST00000497544 PHF2O75151 1096 aa20.25■□□□□ 0.83
CTSD-206ENST00000497544 ADH1BP00325 375 aa20.25■□□□□ 0.83
CTSD-206ENST00000497544 IFNB1P01574 187 aa20.25■□□□□ 0.83
CTSD-206ENST00000497544 CTSLP07711 333 aa20.25■□□□□ 0.83
CTSD-206ENST00000497544 C1QTNF9P0C862 333 aa20.25■□□□□ 0.83
CTSD-206ENST00000497544 NDUFV2P19404 249 aa20.25■□□□□ 0.83
CTSD-206ENST00000497544 COILP38432 576 aaPredicted RBP20.25■□□□□ 0.83
CTSD-206ENST00000497544 PSMD8P48556 350 aa20.25■□□□□ 0.83
CTSD-206ENST00000497544 DSC2Q02487 901 aa20.25■□□□□ 0.83
CTSD-206ENST00000497544 ZBTB16Q05516 673 aa20.25■□□□□ 0.83
CTSD-206ENST00000497544 BCL2L1Q07817 233 aa20.25■□□□□ 0.83
CTSD-206ENST00000497544 SFSWAPQ12872 951 aaKnown RBP20.25■□□□□ 0.83
CTSD-206ENST00000497544 DNTTIP2Q5QJE6 756 aaKnown RBP20.25■□□□□ 0.83
CTSD-206ENST00000497544 GDPD4Q6W3E5 623 aa20.25■□□□□ 0.83
CTSD-206ENST00000497544 CACUL1Q86Y37 369 aa20.25■□□□□ 0.83
CTSD-206ENST00000497544 PAF1Q8N7H5 531 aa20.25■□□□□ 0.83
CTSD-206ENST00000497544 CCDC89Q8N998 374 aa20.25■□□□□ 0.83
CTSD-206ENST00000497544 CCDC110Q8TBZ0 833 aa20.25■□□□□ 0.83
CTSD-206ENST00000497544 GANCQ8TET4 914 aa20.25■□□□□ 0.83
CTSD-206ENST00000497544 OSBPL1AQ9BXW6 950 aa20.25■□□□□ 0.83
CTSD-206ENST00000497544 SLC25A51Q9H1U9 297 aa20.25■□□□□ 0.83
CTSD-206ENST00000497544 ATP13A3Q9H7F0 1226 aa20.25■□□□□ 0.83
CTSD-206ENST00000497544 NOD2Q9HC29 1040 aa20.25■□□□□ 0.83
CTSD-206ENST00000497544 DYRK4Q9NR20 520 aa20.25■□□□□ 0.83
CTSD-206ENST00000497544 PRMT8Q9NR22 394 aaPredicted RBP20.25■□□□□ 0.83
CTSD-206ENST00000497544 EBF1Q9UH73 591 aa20.25■□□□□ 0.83
CTSD-206ENST00000497544 FEZ2Q9UHY8 353 aaPredicted RBP20.25■□□□□ 0.83
CTSD-206ENST00000497544 SARDHQ9UL12 918 aa20.25■□□□□ 0.83
CTSD-206ENST00000497544 SCML1Q9UN30 329 aa20.25■□□□□ 0.83
CTSD-206ENST00000497544 NBEAQ8NFP9 2946 aa20.25■□□□□ 0.83
CTSD-206ENST00000497544 GCATO75600 419 aa20.24■□□□□ 0.83
CTSD-206ENST00000497544 SERPINF2P08697 491 aa20.24■□□□□ 0.83
CTSD-206ENST00000497544 C5AR1P21730 350 aa20.24■□□□□ 0.83
CTSD-206ENST00000497544 HOXA6P31267 233 aa20.24■□□□□ 0.83
CTSD-206ENST00000497544 PXNP49023 591 aaPredicted RBP20.24■□□□□ 0.83
CTSD-206ENST00000497544 NRLP54845 237 aa20.24■□□□□ 0.83
CTSD-206ENST00000497544 GDF10P55107 478 aa20.24■□□□□ 0.83
CTSD-206ENST00000497544 CKAP4Q07065 602 aaKnown RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms