RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 SPINT1O43278 529 aa17.06■□□□□ 0.32
TRAPPC3-207ENST00000497251 IGSF6O95976 241 aa17.06■□□□□ 0.32
TRAPPC3-207ENST00000497251 UGT2B4P06133 528 aa17.06■□□□□ 0.32
TRAPPC3-207ENST00000497251 ALPIP09923 528 aa17.06■□□□□ 0.32
TRAPPC3-207ENST00000497251 KRT3P12035 628 aa17.06■□□□□ 0.32
TRAPPC3-207ENST00000497251 DESP17661 470 aa17.06■□□□□ 0.32
TRAPPC3-207ENST00000497251 TGM2P21980 687 aa17.06■□□□□ 0.32
TRAPPC3-207ENST00000497251 HTR7P34969 479 aa17.06■□□□□ 0.32
TRAPPC3-207ENST00000497251 SKOR1P84550 965 aa17.06■□□□□ 0.32
TRAPPC3-207ENST00000497251 PPARDQ03181 441 aa17.06■□□□□ 0.32
TRAPPC3-207ENST00000497251 VAC14Q08AM6 782 aa17.06■□□□□ 0.32
TRAPPC3-207ENST00000497251 ELOCQ15369 112 aa17.06■□□□□ 0.32
TRAPPC3-207ENST00000497251 PARP15Q460N3 678 aa17.06■□□□□ 0.32
TRAPPC3-207ENST00000497251 TAF1BQ53T94 588 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC3-207ENST00000497251 PRRT3Q5FWE3 981 aa17.06■□□□□ 0.32
TRAPPC3-207ENST00000497251 GUSBP11Q6P575 273 aa17.06■□□□□ 0.32
TRAPPC3-207ENST00000497251 PHACTR4Q8IZ21 702 aa17.06■□□□□ 0.32
TRAPPC3-207ENST00000497251 EMC1Q8N766 993 aa17.06■□□□□ 0.32
TRAPPC3-207ENST00000497251 CXorf40AQ8TE69 158 aa17.06■□□□□ 0.32
TRAPPC3-207ENST00000497251 KLHL32Q96NJ5 620 aa17.06■□□□□ 0.32
TRAPPC3-207ENST00000497251 DNAI1Q9UI46 699 aa17.06■□□□□ 0.32
TRAPPC3-207ENST00000497251 SETXQ7Z333 2677 aaKnown RBP17.06■□□□□ 0.32
TRAPPC3-207ENST00000497251 ASH1LQ9NR48 2969 aaKnown RBP17.06■□□□□ 0.32
TRAPPC3-207ENST00000497251 ANKRD62A6NC57 917 aa17.05■□□□□ 0.32
TRAPPC3-207ENST00000497251 KLK10O43240 276 aa17.05■□□□□ 0.32
TRAPPC3-207ENST00000497251 BUB1O43683 1085 aa17.05■□□□□ 0.32
TRAPPC3-207ENST00000497251 CALB1P05937 261 aa17.05■□□□□ 0.32
TRAPPC3-207ENST00000497251 HTR1BP28222 390 aa17.05■□□□□ 0.32
TRAPPC3-207ENST00000497251 SOX5P35711 763 aa17.05■□□□□ 0.32
TRAPPC3-207ENST00000497251 AGERQ15109 404 aa17.05■□□□□ 0.32
TRAPPC3-207ENST00000497251 CDO1Q16878 200 aa17.05■□□□□ 0.32
TRAPPC3-207ENST00000497251 DEFB133Q30KQ1 61 aa17.05■□□□□ 0.32
TRAPPC3-207ENST00000497251 DPCR1Q3MIW9 517 aa17.05■□□□□ 0.32
TRAPPC3-207ENST00000497251 C2CD6Q53TS8 623 aa17.05■□□□□ 0.32
TRAPPC3-207ENST00000497251 FAXCQ5TGI0 409 aa17.05■□□□□ 0.32
TRAPPC3-207ENST00000497251 SLFN11Q7Z7L1 901 aa17.05■□□□□ 0.32
TRAPPC3-207ENST00000497251 RTL3Q8N8U3 475 aaKnown RBP17.05■□□□□ 0.32
TRAPPC3-207ENST00000497251 VCPIP1Q96JH7 1222 aa17.05■□□□□ 0.32
TRAPPC3-207ENST00000497251 CATSPERBQ9H7T0 1116 aa17.05■□□□□ 0.32
TRAPPC3-207ENST00000497251 NDFIP2Q9NV92 336 aa17.05■□□□□ 0.32
TRAPPC3-207ENST00000497251 PADI4Q9UM07 663 aa17.05■□□□□ 0.32
TRAPPC3-207ENST00000497251 SATB2Q9UPW6 733 aa17.05■□□□□ 0.32
TRAPPC3-207ENST00000497251 ENTPD2Q9Y5L3 495 aa17.05■□□□□ 0.32
TRAPPC3-207ENST00000497251 CCDC187A0A096LP49 1063 aa17.04■□□□□ 0.32
TRAPPC3-207ENST00000497251 CFAP69A5D8W1 941 aa17.04■□□□□ 0.32
TRAPPC3-207ENST00000497251 WASH4PA8MWX3 477 aa17.04■□□□□ 0.32
TRAPPC3-207ENST00000497251 CDRT15L2A8MXV6 281 aa17.04■□□□□ 0.32
TRAPPC3-207ENST00000497251 TMCC1O94876 653 aa17.04■□□□□ 0.32
TRAPPC3-207ENST00000497251 PRB1P04280 392 aa17.04■□□□□ 0.32
TRAPPC3-207ENST00000497251 XPAP23025 273 aaPredicted RBP17.04■□□□□ 0.32
TRAPPC3-207ENST00000497251 EIF4A3P38919 411 aaKnown RBP17.04■□□□□ 0.32
TRAPPC3-207ENST00000497251 STAT1P42224 750 aa17.04■□□□□ 0.32
TRAPPC3-207ENST00000497251 NSFP46459 744 aaKnown RBP17.04■□□□□ 0.32
TRAPPC3-207ENST00000497251 ADKP55263 362 aaKnown RBP17.04■□□□□ 0.32
TRAPPC3-207ENST00000497251 HDAC4P56524 1084 aa17.04■□□□□ 0.32
TRAPPC3-207ENST00000497251 FMO1Q01740 532 aa17.04■□□□□ 0.32
TRAPPC3-207ENST00000497251 C15orf59Q2T9L4 293 aaPredicted RBP17.04■□□□□ 0.32
TRAPPC3-207ENST00000497251 TMEM52BQ4KMG9 183 aa17.04■□□□□ 0.32
TRAPPC3-207ENST00000497251 EFHC2Q5JST6 749 aa17.04■□□□□ 0.32
TRAPPC3-207ENST00000497251 FKBP15Q5T1M5 1219 aa17.04■□□□□ 0.32
TRAPPC3-207ENST00000497251 XKR5Q6UX68 686 aa17.04■□□□□ 0.32
TRAPPC3-207ENST00000497251 CLEC14AQ86T13 490 aa17.04■□□□□ 0.32
TRAPPC3-207ENST00000497251 PHF13Q86YI8 300 aaPredicted RBP17.04■□□□□ 0.32
TRAPPC3-207ENST00000497251 C3orf20Q8ND61 904 aa17.04■□□□□ 0.32
TRAPPC3-207ENST00000497251 ENOX1Q8TC92 643 aaKnown RBP17.04■□□□□ 0.32
TRAPPC3-207ENST00000497251 FAM172AQ8WUF8 416 aa17.04■□□□□ 0.32
TRAPPC3-207ENST00000497251 LIN37Q96GY3 246 aaPredicted RBP17.04■□□□□ 0.32
TRAPPC3-207ENST00000497251 ZNF641Q96N77 438 aaPredicted RBP17.04■□□□□ 0.32
TRAPPC3-207ENST00000497251 NEU3Q9UQ49 428 aa17.04■□□□□ 0.32
TRAPPC3-207ENST00000497251 SIGLEC16A6NMB1 481 aa17.03■□□□□ 0.32
TRAPPC3-207ENST00000497251 EIF3CLB5ME19 914 aaKnown RBP17.03■□□□□ 0.32
TRAPPC3-207ENST00000497251 FAM72CH0Y354 149 aa17.03■□□□□ 0.32
TRAPPC3-207ENST00000497251 YY2O15391 372 aa17.03■□□□□ 0.32
TRAPPC3-207ENST00000497251 FGF10O15520 208 aaPredicted RBP17.03■□□□□ 0.32
TRAPPC3-207ENST00000497251 GCATO75600 419 aa17.03■□□□□ 0.32
TRAPPC3-207ENST00000497251 GFPT2O94808 682 aa17.03■□□□□ 0.32
TRAPPC3-207ENST00000497251 ITGA2BP08514 1039 aa17.03■□□□□ 0.32
TRAPPC3-207ENST00000497251 UNGP13051 313 aaPredicted RBP17.03■□□□□ 0.32
TRAPPC3-207ENST00000497251 EPHB2P29323 1055 aa17.03■□□□□ 0.32
TRAPPC3-207ENST00000497251 IGFALSP35858 605 aa17.03■□□□□ 0.32
TRAPPC3-207ENST00000497251 JAM2P57087 298 aa17.03■□□□□ 0.32
TRAPPC3-207ENST00000497251 RHOAP61586 193 aa17.03■□□□□ 0.32
TRAPPC3-207ENST00000497251 SPIDRQ14159 915 aa17.03■□□□□ 0.32
TRAPPC3-207ENST00000497251 LRRC14Q15048 493 aa17.03■□□□□ 0.32
TRAPPC3-207ENST00000497251 C3orf38Q5JPI3 329 aa17.03■□□□□ 0.32
TRAPPC3-207ENST00000497251 FAM72AQ5TYM5 149 aa17.03■□□□□ 0.32
TRAPPC3-207ENST00000497251 FAM72DQ6L9T8 149 aa17.03■□□□□ 0.32
TRAPPC3-207ENST00000497251 PPP1R2P3Q6NXS1 205 aa17.03■□□□□ 0.32
TRAPPC3-207ENST00000497251 BRAT1Q6PJG6 821 aa17.03■□□□□ 0.32
TRAPPC3-207ENST00000497251 RBM43Q6ZSC3 357 aaKnown RBP17.03■□□□□ 0.32
TRAPPC3-207ENST00000497251 VPS36Q86VN1 386 aa17.03■□□□□ 0.32
TRAPPC3-207ENST00000497251 FAM72BQ86X60 149 aa17.03■□□□□ 0.32
TRAPPC3-207ENST00000497251 SLC35F3Q8IY50 421 aa17.03■□□□□ 0.32
TRAPPC3-207ENST00000497251 UMODL1-AS1Q8N2C9 162 aa17.03■□□□□ 0.32
TRAPPC3-207ENST00000497251 ARL10Q8N8L6 244 aa17.03■□□□□ 0.32
TRAPPC3-207ENST00000497251 OR6K2Q8NGY2 324 aa17.03■□□□□ 0.32
TRAPPC3-207ENST00000497251 GPT2Q8TD30 523 aa17.03■□□□□ 0.32
TRAPPC3-207ENST00000497251 VOPP1Q96AW1 172 aa17.03■□□□□ 0.32
TRAPPC3-207ENST00000497251 ATXN7L3BQ96GX2 97 aa17.03■□□□□ 0.32
TRAPPC3-207ENST00000497251 NAF1Q96HR8 494 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms