RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 ARF3P61204 181 aaPredicted RBP3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 YWHAZP63104 245 aaKnown RBP3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 ARF1P84077 181 aaKnown RBP3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 ARF5P84085 180 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 PPIL2Q13356 520 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 XRCC4Q13426 336 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 KCNC3Q14003 757 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 CAPRIN1Q14444 709 aaKnown RBP3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 KYAT1Q16773 422 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 TPD52L1Q16890 204 aaPredicted RBP3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 ZNF827Q17R98 1081 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 ANKRD20A8PQ5CZ79 823 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 ANKRD20A2Q5SQ80 823 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 TMEM240Q5SV17 173 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 MROH9Q5TGP6 573 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 LIN9Q5TKA1 542 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 PIK3R6Q5UE93 754 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 E4F1Q66K89 784 aaPredicted RBP3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 SLC25A24Q6NUK1 477 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 BLOC1S2Q6QNY1 142 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 LMBR1LQ6UX01 489 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 SGMS1Q86VZ5 419 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 DCP2Q8IU60 420 aaKnown RBP3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 LIX1LQ8IVB5 337 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 MAPKAPK5Q8IW41 473 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 FUKQ8N0W3 1084 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 CLEC4FQ8N1N0 589 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 Q8N1Y9 231 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 NXPE1Q8N323 547 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 ELMOD1Q8N336 334 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 FBXL16Q8N461 479 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 STPG3Q8N7X2 389 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 ICA1LQ8NDH6 482 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 SRFBP1Q8NEF9 429 aaKnown RBP3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 C1orf162Q8NEQ5 155 aaPredicted RBP3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 CHST13Q8NET6 341 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 ZNF671Q8TAW3 534 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 ETNPPLQ8TBG4 499 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 RAB3IL1Q8TBN0 382 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 CCDC12Q8WUD4 166 aaPredicted RBP3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 HEXDCQ8WVB3 486 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 DPF2Q92785 391 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 WRNIP1Q96S55 665 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 HAPLN3Q96S86 360 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 ATP6V0BQ99437 205 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 HEMGNQ9BXL5 484 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 FRMD8Q9BZ67 464 aaPredicted RBP3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 XYLT2Q9H1B5 865 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 ISCUQ9H1K1 167 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 LHX5Q9H2C1 402 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 OSGEPL1Q9H4B0 414 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 L2HGDHQ9H9P8 463 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 TRIM39Q9HCM9 518 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 SLC35C2Q9NQQ7 365 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 SAMSN1Q9NSI8 373 aaKnown RBP3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 ZBTB40Q9NUA8 1239 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 C14orf119Q9NWQ9 140 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 ENOPH1Q9UHY7 261 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 MAD2L2Q9UI95 211 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 CNOT7Q9UIV1 285 aaKnown RBP3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 GINS2Q9Y248 185 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 SIK3Q9Y2K2 1263 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 COA3Q9Y2R0 106 aaPredicted RBP3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 HBS1LQ9Y450 684 aaKnown RBP3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 DTNAQ9Y4J8 743 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 PDS5BQ9NTI5 1447 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 ADAMTSL3P82987 1691 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 PLEKHG1Q9ULL1 1385 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 FUOMA2VDF0 154 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 RAB19A4D1S5 217 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 PI4KAP2A4QPH2 592 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 RHPN2P1A8MT19 583 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 E9PBE3 544 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 H7C0C1 242 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 CASC3O15234 703 aaKnown RBP3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 PI15O43692 258 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 ERAL1O75616 437 aaKnown RBP3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 KRT16P08779 473 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 RALAP11233 206 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 GSTM2P28161 218 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 PCGF2P35227 344 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 RFC2P35250 354 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 IGHMBP2P38935 993 aaKnown RBP3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 MAGEA11P43364 429 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 SLC15A1P46059 708 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 GPR3P46089 330 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 GSSP48637 474 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 SLC9A3P48764 834 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 ARHGDIAP52565 204 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 SLC7A2P52569 658 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 GBX2P52951 348 aaPredicted RBP3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 ITGA8P53708 1063 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 RRADP55042 308 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 PEX3P56589 373 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 ATP8B2P98198 1209 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 KLF1Q13351 362 aaPredicted RBP3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 SNAPC2Q13487 334 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 KCNAB1Q14722 419 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 NR1I3Q14994 352 aa3.15□□□□□ -1.91
SNRNP48-202ENST00000496946 SKIDA1Q1XH10 827 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms