RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 DLG2Q15700 870 aa9.78□□□□□ -0.84
SMARCAL1-213ENST00000496037 MS4A13Q5J8X5 152 aa9.78□□□□□ -0.84
SMARCAL1-213ENST00000496037 RAB41Q5JT25 222 aa9.78□□□□□ -0.84
SMARCAL1-213ENST00000496037 PM20D1Q6GTS8 502 aa9.78□□□□□ -0.84
SMARCAL1-213ENST00000496037 NADSYN1Q6IA69 706 aa9.78□□□□□ -0.84
SMARCAL1-213ENST00000496037 KDELC2Q7Z4H8 507 aa9.78□□□□□ -0.84
SMARCAL1-213ENST00000496037 PIM3Q86V86 326 aa9.78□□□□□ -0.84
SMARCAL1-213ENST00000496037 ZSCAN30Q86W11 494 aa9.78□□□□□ -0.84
SMARCAL1-213ENST00000496037 GKN2Q86XP6 184 aa9.78□□□□□ -0.84
SMARCAL1-213ENST00000496037 NLGN4XQ8N0W4 816 aa9.78□□□□□ -0.84
SMARCAL1-213ENST00000496037 DENND6BQ8NEG7 585 aa9.78□□□□□ -0.84
SMARCAL1-213ENST00000496037 NLGN4YQ8NFZ3 816 aaPredicted RBP9.78□□□□□ -0.84
SMARCAL1-213ENST00000496037 NDRG1Q92597 394 aaKnown RBP9.78□□□□□ -0.84
SMARCAL1-213ENST00000496037 TAF4BQ92750 862 aa9.78□□□□□ -0.84
SMARCAL1-213ENST00000496037 ART4Q93070 314 aa9.78□□□□□ -0.84
SMARCAL1-213ENST00000496037 AZIN2Q96A70 460 aa9.78□□□□□ -0.84
SMARCAL1-213ENST00000496037 UBXN6Q9BZV1 441 aa9.78□□□□□ -0.84
SMARCAL1-213ENST00000496037 NUCKS1Q9H1E3 243 aaKnown RBP9.78□□□□□ -0.84
SMARCAL1-213ENST00000496037 LRRC4Q9HBW1 653 aa9.78□□□□□ -0.84
SMARCAL1-213ENST00000496037 CYP4F12Q9HCS2 524 aa9.78□□□□□ -0.84
SMARCAL1-213ENST00000496037 AGPAT3Q9NRZ7 376 aa9.78□□□□□ -0.84
SMARCAL1-213ENST00000496037 ABCC13Q9NSE7 274 aa9.78□□□□□ -0.84
SMARCAL1-213ENST00000496037 CCDC39Q9UFE4 941 aa9.78□□□□□ -0.84
SMARCAL1-213ENST00000496037 PRRC2CQ9Y520 2896 aaKnown RBP9.78□□□□□ -0.84
SMARCAL1-213ENST00000496037 ZNF106Q9H2Y7 1883 aaKnown RBP9.78□□□□□ -0.84
SMARCAL1-213ENST00000496037 FRMD3A2A2Y4 597 aa9.77□□□□□ -0.85
SMARCAL1-213ENST00000496037 CPNE6O95741 557 aa9.77□□□□□ -0.85
SMARCAL1-213ENST00000496037 IGLV3-27P01718 113 aa9.77□□□□□ -0.85
SMARCAL1-213ENST00000496037 C4BPAP04003 597 aaKnown RBP9.77□□□□□ -0.85
SMARCAL1-213ENST00000496037 RPN1P04843 607 aaKnown RBP9.77□□□□□ -0.85
SMARCAL1-213ENST00000496037 CTSLP07711 333 aa9.77□□□□□ -0.85
SMARCAL1-213ENST00000496037 TIMP2P16035 220 aa9.77□□□□□ -0.85
SMARCAL1-213ENST00000496037 PNLIPP16233 465 aa9.77□□□□□ -0.85
SMARCAL1-213ENST00000496037 CD58P19256 250 aa9.77□□□□□ -0.85
SMARCAL1-213ENST00000496037 CHRNA3P32297 505 aa9.77□□□□□ -0.85
SMARCAL1-213ENST00000496037 NEK3P51956 506 aa9.77□□□□□ -0.85
SMARCAL1-213ENST00000496037 RAB15P59190 212 aa9.77□□□□□ -0.85
SMARCAL1-213ENST00000496037 CENPCQ03188 943 aa9.77□□□□□ -0.85
SMARCAL1-213ENST00000496037 INPP5JQ15735 1006 aaPredicted RBP9.77□□□□□ -0.85
SMARCAL1-213ENST00000496037 OXLD1Q5BKU9 147 aa9.77□□□□□ -0.85
SMARCAL1-213ENST00000496037 DCAF12Q5T6F0 453 aa9.77□□□□□ -0.85
SMARCAL1-213ENST00000496037 SPOPLQ6IQ16 392 aa9.77□□□□□ -0.85
SMARCAL1-213ENST00000496037 MACC1Q6ZN28 852 aa9.77□□□□□ -0.85
SMARCAL1-213ENST00000496037 CAPN12Q6ZSI9 719 aa9.77□□□□□ -0.85
SMARCAL1-213ENST00000496037 BHLHA9Q7RTU4 235 aa9.77□□□□□ -0.85
SMARCAL1-213ENST00000496037 UNC5BQ8IZJ1 945 aa9.77□□□□□ -0.85
SMARCAL1-213ENST00000496037 SIX6OS1Q8N1H7 587 aa9.77□□□□□ -0.85
SMARCAL1-213ENST00000496037 RCBTB1Q8NDN9 531 aa9.77□□□□□ -0.85
SMARCAL1-213ENST00000496037 GRIN3AQ8TCU5 1115 aa9.77□□□□□ -0.85
SMARCAL1-213ENST00000496037 MYEOVQ96EZ4 313 aa9.77□□□□□ -0.85
SMARCAL1-213ENST00000496037 LENG8Q96PV6 779 aaPredicted RBP9.77□□□□□ -0.85
SMARCAL1-213ENST00000496037 PPP1R9BQ96SB3 815 aa9.77□□□□□ -0.85
SMARCAL1-213ENST00000496037 HDAC8Q9BY41 377 aa9.77□□□□□ -0.85
SMARCAL1-213ENST00000496037 TRIM55Q9BYV6 548 aa9.77□□□□□ -0.85
SMARCAL1-213ENST00000496037 IMPG2Q9BZV3 1241 aa9.77□□□□□ -0.85
SMARCAL1-213ENST00000496037 RDH14Q9HBH5 336 aa9.77□□□□□ -0.85
SMARCAL1-213ENST00000496037 SLC39A1Q9NY26 324 aa9.77□□□□□ -0.85
SMARCAL1-213ENST00000496037 HIVEP3Q5T1R4 2406 aa9.77□□□□□ -0.85
SMARCAL1-213ENST00000496037 LOC101059948A0A1B0GTJ6 334 aa9.76□□□□□ -0.85
SMARCAL1-213ENST00000496037 HEATR9A2RTY3 570 aa9.76□□□□□ -0.85
SMARCAL1-213ENST00000496037 YJEFN3A6XGL0 299 aa9.76□□□□□ -0.85
SMARCAL1-213ENST00000496037 E7ENQ6 273 aa9.76□□□□□ -0.85
SMARCAL1-213ENST00000496037 CLIC2O15247 247 aa9.76□□□□□ -0.85
SMARCAL1-213ENST00000496037 SPTLC2O15270 562 aa9.76□□□□□ -0.85
SMARCAL1-213ENST00000496037 SORBS2O94875 1100 aaKnown RBP9.76□□□□□ -0.85
SMARCAL1-213ENST00000496037 VNN1O95497 513 aa9.76□□□□□ -0.85
SMARCAL1-213ENST00000496037 MOCS2O96007 188 aaPredicted RBP9.76□□□□□ -0.85
SMARCAL1-213ENST00000496037 CSTF2P33240 577 aaKnown RBP eCLIP9.76□□□□□ -0.85
SMARCAL1-213ENST00000496037 PIK3CAP42336 1068 aa9.76□□□□□ -0.85
SMARCAL1-213ENST00000496037 ADIGQ0VDE8 80 aa9.76□□□□□ -0.85
SMARCAL1-213ENST00000496037 NADK2Q4G0N4 442 aa9.76□□□□□ -0.85
SMARCAL1-213ENST00000496037 ZRANB3Q5FWF4 1079 aa9.76□□□□□ -0.85
SMARCAL1-213ENST00000496037 CERCAMQ5T4B2 595 aa9.76□□□□□ -0.85
SMARCAL1-213ENST00000496037 MSANTD2Q6P1R3 559 aa9.76□□□□□ -0.85
SMARCAL1-213ENST00000496037 GDF7Q7Z4P5 450 aa9.76□□□□□ -0.85
SMARCAL1-213ENST00000496037 CHSY1Q86X52 802 aa9.76□□□□□ -0.85
SMARCAL1-213ENST00000496037 HID1Q8IV36 788 aa9.76□□□□□ -0.85
SMARCAL1-213ENST00000496037 CCDC65Q8IXS2 484 aa9.76□□□□□ -0.85
SMARCAL1-213ENST00000496037 NRSN1Q8IZ57 195 aa9.76□□□□□ -0.85
SMARCAL1-213ENST00000496037 LGI2Q8N0V4 545 aa9.76□□□□□ -0.85
SMARCAL1-213ENST00000496037 AGBL5Q8NDL9 886 aa9.76□□□□□ -0.85
SMARCAL1-213ENST00000496037 TMIEQ8NEW7 156 aa9.76□□□□□ -0.85
SMARCAL1-213ENST00000496037 SCYL1Q96KG9 808 aa9.76□□□□□ -0.85
SMARCAL1-213ENST00000496037 LURAP1Q96LR2 239 aa9.76□□□□□ -0.85
SMARCAL1-213ENST00000496037 CCDC74BQ96LY2 380 aa9.76□□□□□ -0.85
SMARCAL1-213ENST00000496037 KLF6Q99612 283 aaPredicted RBP9.76□□□□□ -0.85
SMARCAL1-213ENST00000496037 EDEM3Q9BZQ6 932 aa9.76□□□□□ -0.85
SMARCAL1-213ENST00000496037 CYP3A43Q9HB55 503 aa9.76□□□□□ -0.85
SMARCAL1-213ENST00000496037 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.76□□□□□ -0.85
SMARCAL1-213ENST00000496037 TLK1Q9UKI8 766 aa9.76□□□□□ -0.85
SMARCAL1-213ENST00000496037 PILRAQ9UKJ1 303 aa9.76□□□□□ -0.85
SMARCAL1-213ENST00000496037 PNMA8BQ9ULN7 279 aaPredicted RBP9.76□□□□□ -0.85
SMARCAL1-213ENST00000496037 POLHQ9Y253 713 aa9.76□□□□□ -0.85
SMARCAL1-213ENST00000496037 OAS3Q9Y6K5 1087 aaKnown RBP9.76□□□□□ -0.85
SMARCAL1-213ENST00000496037 LRRIQ3A6PVS8 624 aaPredicted RBP9.75□□□□□ -0.85
SMARCAL1-213ENST00000496037 INPP4BO15327 924 aa9.75□□□□□ -0.85
SMARCAL1-213ENST00000496037 ZW10O43264 779 aa9.75□□□□□ -0.85
SMARCAL1-213ENST00000496037 EXOC3O60645 756 aa9.75□□□□□ -0.85
SMARCAL1-213ENST00000496037 ASS1P00966 412 aaKnown RBP9.75□□□□□ -0.85
SMARCAL1-213ENST00000496037 PDGFAP04085 211 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms