RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 KIAA0895LQ68EN5 471 aa12.22□□□□□ -0.45
CSNK1E-213ENST00000495232 AADACL2Q6P093 401 aa12.22□□□□□ -0.45
CSNK1E-213ENST00000495232 BRAT1Q6PJG6 821 aa12.22□□□□□ -0.45
CSNK1E-213ENST00000495232 PARS2Q7L3T8 475 aaKnown RBP12.22□□□□□ -0.45
CSNK1E-213ENST00000495232 CAMK1DQ8IU85 385 aa12.22□□□□□ -0.45
CSNK1E-213ENST00000495232 REXO1L1PQ8IX06 675 aa12.22□□□□□ -0.45
CSNK1E-213ENST00000495232 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.22□□□□□ -0.45
CSNK1E-213ENST00000495232 HCAR2Q8TDS4 363 aa12.22□□□□□ -0.45
CSNK1E-213ENST00000495232 PDCD6IPQ8WUM4 868 aaKnown RBP12.22□□□□□ -0.45
CSNK1E-213ENST00000495232 RAB7BQ96AH8 199 aa12.22□□□□□ -0.45
CSNK1E-213ENST00000495232 SEMA3CQ99985 751 aa12.22□□□□□ -0.45
CSNK1E-213ENST00000495232 MIR1-1HGQ9H1L0 117 aa12.22□□□□□ -0.45
CSNK1E-213ENST00000495232 C6orf106Q9H6K1 298 aaPredicted RBP12.22□□□□□ -0.45
CSNK1E-213ENST00000495232 PREBQ9HCU5 417 aa12.22□□□□□ -0.45
CSNK1E-213ENST00000495232 DKK3Q9UBP4 350 aa12.22□□□□□ -0.45
CSNK1E-213ENST00000495232 A0A1W2PQ67 120 aa12.21□□□□□ -0.45
CSNK1E-213ENST00000495232 BCLAF3A2AJT9 711 aaKnown RBP12.21□□□□□ -0.45
CSNK1E-213ENST00000495232 SOCS5O75159 536 aa12.21□□□□□ -0.45
CSNK1E-213ENST00000495232 ZNF189O75820 626 aaPredicted RBP12.21□□□□□ -0.45
CSNK1E-213ENST00000495232 CA4P22748 312 aa12.21□□□□□ -0.45
CSNK1E-213ENST00000495232 ITPKAP23677 461 aa12.21□□□□□ -0.45
CSNK1E-213ENST00000495232 NFKBIAP25963 317 aa12.21□□□□□ -0.45
CSNK1E-213ENST00000495232 MPLP40238 635 aa12.21□□□□□ -0.45
CSNK1E-213ENST00000495232 SUOXP51687 545 aa12.21□□□□□ -0.45
CSNK1E-213ENST00000495232 EIF3EP60228 445 aaKnown RBP12.21□□□□□ -0.45
CSNK1E-213ENST00000495232 IFI35P80217 286 aaPredicted RBP12.21□□□□□ -0.45
CSNK1E-213ENST00000495232 SPEM2Q0P670 501 aa12.21□□□□□ -0.45
CSNK1E-213ENST00000495232 PRKD1Q15139 912 aaPredicted RBP12.21□□□□□ -0.45
CSNK1E-213ENST00000495232 NOMO1Q15155 1222 aa12.21□□□□□ -0.45
CSNK1E-213ENST00000495232 SLC45A4Q5BKX6 768 aa12.21□□□□□ -0.45
CSNK1E-213ENST00000495232 ZNF569Q5MCW4 686 aa12.21□□□□□ -0.45
CSNK1E-213ENST00000495232 ERAP2Q6P179 960 aa12.21□□□□□ -0.45
CSNK1E-213ENST00000495232 NEK5Q6P3R8 708 aa12.21□□□□□ -0.45
CSNK1E-213ENST00000495232 B4GALNT4Q76KP1 1039 aa12.21□□□□□ -0.45
CSNK1E-213ENST00000495232 RABEPKQ7Z6M1 372 aa12.21□□□□□ -0.45
CSNK1E-213ENST00000495232 PRPF39Q86UA1 669 aaKnown RBP12.21□□□□□ -0.45
CSNK1E-213ENST00000495232 SYT12Q8IV01 421 aa12.21□□□□□ -0.45
CSNK1E-213ENST00000495232 SLC41A1Q8IVJ1 513 aa12.21□□□□□ -0.45
CSNK1E-213ENST00000495232 PGBD5Q8N414 524 aa12.21□□□□□ -0.45
CSNK1E-213ENST00000495232 GPR161Q8N6U8 529 aaKnown RBP12.21□□□□□ -0.45
CSNK1E-213ENST00000495232 CEP76Q8TAP6 659 aa12.21□□□□□ -0.45
CSNK1E-213ENST00000495232 ACTL9Q8TC94 416 aa12.21□□□□□ -0.45
CSNK1E-213ENST00000495232 FAM131CQ96AQ9 280 aa12.21□□□□□ -0.45
CSNK1E-213ENST00000495232 FEM1CQ96JP0 617 aa12.21□□□□□ -0.45
CSNK1E-213ENST00000495232 AGAP3Q96P47 875 aa12.21□□□□□ -0.45
CSNK1E-213ENST00000495232 CARD9Q9H257 536 aa12.21□□□□□ -0.45
CSNK1E-213ENST00000495232 NOD2Q9HC29 1040 aa12.21□□□□□ -0.45
CSNK1E-213ENST00000495232 SUSD2Q9UGT4 822 aa12.21□□□□□ -0.45
CSNK1E-213ENST00000495232 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.21□□□□□ -0.45
CSNK1E-213ENST00000495232 JRKLQ9Y4A0 524 aa12.21□□□□□ -0.45
CSNK1E-213ENST00000495232 ZFHX2Q9C0A1 2572 aaPredicted RBP12.2□□□□□ -0.46
CSNK1E-213ENST00000495232 ANKRD36A6QL64 1941 aa12.2□□□□□ -0.46
CSNK1E-213ENST00000495232 TTC24A2A3L6 582 aaPredicted RBP12.2□□□□□ -0.46
CSNK1E-213ENST00000495232 RNF103O00237 685 aa12.2□□□□□ -0.46
CSNK1E-213ENST00000495232 TSPAN6O43657 245 aa12.2□□□□□ -0.46
CSNK1E-213ENST00000495232 AP1G1O43747 822 aa12.2□□□□□ -0.46
CSNK1E-213ENST00000495232 RNGTTO60942 597 aaKnown RBP12.2□□□□□ -0.46
CSNK1E-213ENST00000495232 LRP3O75074 770 aa12.2□□□□□ -0.46
CSNK1E-213ENST00000495232 GJB3O75712 270 aa12.2□□□□□ -0.46
CSNK1E-213ENST00000495232 STK10O94804 968 aaKnown RBP12.2□□□□□ -0.46
CSNK1E-213ENST00000495232 HLA-DQB2P05538 268 aa12.2□□□□□ -0.46
CSNK1E-213ENST00000495232 SERPINF2P08697 491 aa12.2□□□□□ -0.46
CSNK1E-213ENST00000495232 CR2P20023 1033 aa12.2□□□□□ -0.46
CSNK1E-213ENST00000495232 MAOBP27338 520 aa12.2□□□□□ -0.46
CSNK1E-213ENST00000495232 HOXD12P35452 270 aa12.2□□□□□ -0.46
CSNK1E-213ENST00000495232 NUDT1P36639 197 aa12.2□□□□□ -0.46
CSNK1E-213ENST00000495232 CCR5P51681 352 aa12.2□□□□□ -0.46
CSNK1E-213ENST00000495232 ELP6Q0PNE2 266 aa12.2□□□□□ -0.46
CSNK1E-213ENST00000495232 ZBTB17Q13105 803 aa12.2□□□□□ -0.46
CSNK1E-213ENST00000495232 DARS2Q6PI48 645 aaKnown RBP12.2□□□□□ -0.46
CSNK1E-213ENST00000495232 ALYREFQ86V81 257 aaKnown RBP12.2□□□□□ -0.46
CSNK1E-213ENST00000495232 CDKL3Q8IVW4 592 aaPredicted RBP12.2□□□□□ -0.46
CSNK1E-213ENST00000495232 NDUFAF2Q8N183 169 aa12.2□□□□□ -0.46
CSNK1E-213ENST00000495232 C12orf50Q8NA57 414 aaPredicted RBP12.2□□□□□ -0.46
CSNK1E-213ENST00000495232 HTR3CQ8WXA8 447 aa12.2□□□□□ -0.46
CSNK1E-213ENST00000495232 DNASE2BQ8WZ79 361 aa12.2□□□□□ -0.46
CSNK1E-213ENST00000495232 BIRC7Q96CA5 298 aa12.2□□□□□ -0.46
CSNK1E-213ENST00000495232 QKIQ96PU8 341 aaKnown RBP eCLIP12.2□□□□□ -0.46
CSNK1E-213ENST00000495232 VAT1Q99536 393 aa12.2□□□□□ -0.46
CSNK1E-213ENST00000495232 IL12RB2Q99665 862 aa12.2□□□□□ -0.46
CSNK1E-213ENST00000495232 CEP41Q9BYV8 373 aa12.2□□□□□ -0.46
CSNK1E-213ENST00000495232 VPS45Q9NRW7 570 aa12.2□□□□□ -0.46
CSNK1E-213ENST00000495232 KLHL8Q9P2G9 620 aaPredicted RBP12.2□□□□□ -0.46
CSNK1E-213ENST00000495232 EIF2B4Q9UI10 523 aaKnown RBP12.2□□□□□ -0.46
CSNK1E-213ENST00000495232 PILRBQ9UKJ0 227 aa12.2□□□□□ -0.46
CSNK1E-213ENST00000495232 PYCARDQ9ULZ3 195 aa12.2□□□□□ -0.46
CSNK1E-213ENST00000495232 ATP8A1Q9Y2Q0 1164 aa12.2□□□□□ -0.46
CSNK1E-213ENST00000495232 PCDHGC4Q9Y5F7 938 aa12.2□□□□□ -0.46
CSNK1E-213ENST00000495232 SDK1Q7Z5N4 2213 aa12.19□□□□□ -0.46
CSNK1E-213ENST00000495232 NUMA1Q14980 2115 aa12.19□□□□□ -0.46
CSNK1E-213ENST00000495232 ATXN2Q99700 1313 aaKnown RBP12.19□□□□□ -0.46
CSNK1E-213ENST00000495232 A0A1W2PQU0 124 aa12.19□□□□□ -0.46
CSNK1E-213ENST00000495232 UPK3BL1B0FP48 263 aa12.19□□□□□ -0.46
CSNK1E-213ENST00000495232 PRR5-ARHGAP8B1AHC4 643 aa12.19□□□□□ -0.46
CSNK1E-213ENST00000495232 UPK3BL2E5RIL1 263 aa12.19□□□□□ -0.46
CSNK1E-213ENST00000495232 ENC1O14682 589 aa12.19□□□□□ -0.46
CSNK1E-213ENST00000495232 KHNYNO15037 678 aaKnown RBP12.19□□□□□ -0.46
CSNK1E-213ENST00000495232 FOXD2O60548 495 aaPredicted RBP12.19□□□□□ -0.46
CSNK1E-213ENST00000495232 CFIP05156 583 aa12.19□□□□□ -0.46
CSNK1E-213ENST00000495232 RBP3P10745 1247 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms