RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 PCDH8O95206 1070 aa11.24□□□□□ -0.61
APTX-230ENST00000494649 ADRB3P13945 408 aa11.24□□□□□ -0.61
APTX-230ENST00000494649 NR2C2P49116 596 aa11.24□□□□□ -0.61
APTX-230ENST00000494649 EIF3EP60228 445 aaKnown RBP11.24□□□□□ -0.61
APTX-230ENST00000494649 BCL2L1Q07817 233 aa11.24□□□□□ -0.61
APTX-230ENST00000494649 SPEM2Q0P670 501 aa11.24□□□□□ -0.61
APTX-230ENST00000494649 NOMO1Q15155 1222 aa11.24□□□□□ -0.61
APTX-230ENST00000494649 LYSMD4Q5XG99 296 aa11.24□□□□□ -0.61
APTX-230ENST00000494649 USP30Q70CQ3 517 aa11.24□□□□□ -0.61
APTX-230ENST00000494649 TAB3Q8N5C8 712 aaPredicted RBP11.24□□□□□ -0.61
APTX-230ENST00000494649 MAML1Q92585 1016 aa11.24□□□□□ -0.61
APTX-230ENST00000494649 BIRC7Q96CA5 298 aa11.24□□□□□ -0.61
APTX-230ENST00000494649 PPP1R16AQ96I34 528 aa11.24□□□□□ -0.61
APTX-230ENST00000494649 MS4A14Q96JA4 679 aa11.24□□□□□ -0.61
APTX-230ENST00000494649 TSGA13Q96PP4 275 aa11.24□□□□□ -0.61
APTX-230ENST00000494649 MGME1Q9BQP7 344 aa11.24□□□□□ -0.61
APTX-230ENST00000494649 EIF2B4Q9UI10 523 aaKnown RBP11.24□□□□□ -0.61
APTX-230ENST00000494649 EP300Q09472 2414 aaPredicted RBP11.24□□□□□ -0.61
APTX-230ENST00000494649 NEMP1O14524 444 aa11.24□□□□□ -0.61
APTX-230ENST00000494649 RHOBTB1O94844 696 aa11.24□□□□□ -0.61
APTX-230ENST00000494649 IGLV3-19P01714 112 aa11.24□□□□□ -0.61
APTX-230ENST00000494649 RBP3P10745 1247 aa11.24□□□□□ -0.61
APTX-230ENST00000494649 CR2P20023 1033 aa11.24□□□□□ -0.61
APTX-230ENST00000494649 ITGB7P26010 798 aa11.24□□□□□ -0.61
APTX-230ENST00000494649 PTPN3P26045 913 aa11.24□□□□□ -0.61
APTX-230ENST00000494649 OXTRP30559 389 aa11.24□□□□□ -0.61
APTX-230ENST00000494649 CD86P42081 329 aa11.24□□□□□ -0.61
APTX-230ENST00000494649 NEK3P51956 506 aa11.24□□□□□ -0.61
APTX-230ENST00000494649 GNG11P61952 73 aa11.24□□□□□ -0.61
APTX-230ENST00000494649 NIPAL4Q0D2K0 466 aa11.24□□□□□ -0.61
APTX-230ENST00000494649 SNX1Q13596 522 aa11.24□□□□□ -0.61
APTX-230ENST00000494649 PRKD1Q15139 912 aaPredicted RBP11.24□□□□□ -0.61
APTX-230ENST00000494649 SEL1L3Q68CR1 1132 aa11.24□□□□□ -0.61
APTX-230ENST00000494649 DARS2Q6PI48 645 aaKnown RBP11.24□□□□□ -0.61
APTX-230ENST00000494649 SLC36A4Q6YBV0 504 aa11.24□□□□□ -0.61
APTX-230ENST00000494649 LRRC49Q8IUZ0 686 aa11.24□□□□□ -0.61
APTX-230ENST00000494649 TEX26Q8N6G2 289 aa11.24□□□□□ -0.61
APTX-230ENST00000494649 C1orf54Q8WWF1 131 aa11.24□□□□□ -0.61
APTX-230ENST00000494649 RBM15Q96T37 977 aaKnown RBP eCLIP11.24□□□□□ -0.61
APTX-230ENST00000494649 WRAP53Q9BUR4 548 aaKnown RBP11.24□□□□□ -0.61
APTX-230ENST00000494649 POLR1EQ9GZS1 481 aaKnown RBP11.24□□□□□ -0.61
APTX-230ENST00000494649 SUV39H2Q9H5I1 410 aa11.24□□□□□ -0.61
APTX-230ENST00000494649 ATP13A3Q9H7F0 1226 aa11.24□□□□□ -0.61
APTX-230ENST00000494649 EBF2Q9HAK2 575 aa11.24□□□□□ -0.61
APTX-230ENST00000494649 FZD3Q9NPG1 666 aa11.24□□□□□ -0.61
APTX-230ENST00000494649 SCML1Q9UN30 329 aa11.24□□□□□ -0.61
APTX-230ENST00000494649 CXorf51AA0A1B0GTR3 108 aa11.23□□□□□ -0.61
APTX-230ENST00000494649 GOLGA6L9A6NEM1 432 aa11.23□□□□□ -0.61
APTX-230ENST00000494649 KCNN4O15554 427 aa11.23□□□□□ -0.61
APTX-230ENST00000494649 GFRA3O60609 400 aa11.23□□□□□ -0.61
APTX-230ENST00000494649 FGGP02679 453 aa11.23□□□□□ -0.61
APTX-230ENST00000494649 PDHA1P08559 390 aa11.23□□□□□ -0.61
APTX-230ENST00000494649 PRLRP16471 622 aa11.23□□□□□ -0.61
APTX-230ENST00000494649 XPAP23025 273 aaPredicted RBP11.23□□□□□ -0.61
APTX-230ENST00000494649 SERPINA4P29622 427 aa11.23□□□□□ -0.61
APTX-230ENST00000494649 TRAF2Q12933 501 aa11.23□□□□□ -0.61
APTX-230ENST00000494649 KLF1Q13351 362 aaPredicted RBP11.23□□□□□ -0.61
APTX-230ENST00000494649 PCSK7Q16549 785 aa11.23□□□□□ -0.61
APTX-230ENST00000494649 KDM7AQ6ZMT4 941 aa11.23□□□□□ -0.61
APTX-230ENST00000494649 CYP2U1Q7Z449 544 aa11.23□□□□□ -0.61
APTX-230ENST00000494649 PLPP6Q8IY26 295 aa11.23□□□□□ -0.61
APTX-230ENST00000494649 SPATA22Q8NHS9 363 aa11.23□□□□□ -0.61
APTX-230ENST00000494649 HTR3CQ8WXA8 447 aa11.23□□□□□ -0.61
APTX-230ENST00000494649 ZC3H10Q96K80 434 aaKnown RBP11.23□□□□□ -0.61
APTX-230ENST00000494649 NUDCD1Q96RS6 583 aa11.23□□□□□ -0.61
APTX-230ENST00000494649 WDR24Q96S15 920 aa11.23□□□□□ -0.61
APTX-230ENST00000494649 SEMA4AQ9H3S1 761 aa11.23□□□□□ -0.61
APTX-230ENST00000494649 SGK2Q9HBY8 427 aa11.23□□□□□ -0.61
APTX-230ENST00000494649 KLHL8Q9P2G9 620 aaPredicted RBP11.23□□□□□ -0.61
APTX-230ENST00000494649 GMEB2Q9UKD1 530 aa11.23□□□□□ -0.61
APTX-230ENST00000494649 FZD4Q9ULV1 537 aa11.23□□□□□ -0.61
APTX-230ENST00000494649 CA5BQ9Y2D0 317 aa11.23□□□□□ -0.61
APTX-230ENST00000494649 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.23□□□□□ -0.61
APTX-230ENST00000494649 PCDHB9Q9Y5E1 797 aa11.23□□□□□ -0.61
APTX-230ENST00000494649 CEP192Q8TEP8 1941 aa11.23□□□□□ -0.61
APTX-230ENST00000494649 LRRC72A6NJI9 287 aa11.23□□□□□ -0.61
APTX-230ENST00000494649 ZNF185O15231 689 aa11.23□□□□□ -0.61
APTX-230ENST00000494649 PLRG1O43660 514 aaKnown RBP11.23□□□□□ -0.61
APTX-230ENST00000494649 MT-CYBP00156 380 aaPredicted RBP11.23□□□□□ -0.61
APTX-230ENST00000494649 IGHV4-34P06331 123 aa11.23□□□□□ -0.61
APTX-230ENST00000494649 CTPS1P17812 591 aa11.23□□□□□ -0.61
APTX-230ENST00000494649 PTPN7P35236 360 aa11.23□□□□□ -0.61
APTX-230ENST00000494649 FAM193AP78312 1265 aa11.23□□□□□ -0.61
APTX-230ENST00000494649 NSUN2Q08J23 767 aaKnown RBP eCLIP11.23□□□□□ -0.61
APTX-230ENST00000494649 WASHC5Q12768 1159 aa11.23□□□□□ -0.61
APTX-230ENST00000494649 SLC45A4Q5BKX6 768 aa11.23□□□□□ -0.61
APTX-230ENST00000494649 BZW1Q7L1Q6 419 aaKnown RBP11.23□□□□□ -0.61
APTX-230ENST00000494649 PID1Q7Z2X4 250 aa11.23□□□□□ -0.61
APTX-230ENST00000494649 PRUNE1Q86TP1 453 aa11.23□□□□□ -0.61
APTX-230ENST00000494649 SLC13A5Q86YT5 568 aaPredicted RBP11.23□□□□□ -0.61
APTX-230ENST00000494649 ZCCHC9Q8N567 271 aaKnown RBP11.23□□□□□ -0.61
APTX-230ENST00000494649 ARRDC2Q8TBH0 407 aa11.23□□□□□ -0.61
APTX-230ENST00000494649 QKIQ96PU8 341 aaKnown RBP eCLIP11.23□□□□□ -0.61
APTX-230ENST00000494649 IL12RB2Q99665 862 aa11.23□□□□□ -0.61
APTX-230ENST00000494649 TMEM121Q9BTD3 319 aa11.23□□□□□ -0.61
APTX-230ENST00000494649 OSBPL1AQ9BXW6 950 aa11.23□□□□□ -0.61
APTX-230ENST00000494649 CPEB1Q9BZB8 566 aaKnown RBP11.23□□□□□ -0.61
APTX-230ENST00000494649 BRD8Q9H0E9 1235 aa11.23□□□□□ -0.61
APTX-230ENST00000494649 DNPEPQ9ULA0 475 aa11.23□□□□□ -0.61
APTX-230ENST00000494649 CHKBQ9Y259 395 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms