RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 TMPRSS12Q86WS5 348 aa9.72□□□□□ -0.85
MSH5-218ENST00000494646 UMODL1-AS1Q8N2C9 162 aa9.72□□□□□ -0.85
MSH5-218ENST00000494646 PDCD7Q8N8D1 485 aaKnown RBP9.72□□□□□ -0.85
MSH5-218ENST00000494646 HNRNPLLQ8WVV9 542 aaKnown RBP9.72□□□□□ -0.85
MSH5-218ENST00000494646 RAB7BQ96AH8 199 aa9.72□□□□□ -0.85
MSH5-218ENST00000494646 ZNF653Q96CK0 615 aa9.72□□□□□ -0.85
MSH5-218ENST00000494646 GDAP1L1Q96MZ0 367 aa9.72□□□□□ -0.85
MSH5-218ENST00000494646 KLF6Q99612 283 aaPredicted RBP9.72□□□□□ -0.85
MSH5-218ENST00000494646 WRAP53Q9BUR4 548 aaKnown RBP9.72□□□□□ -0.85
MSH5-218ENST00000494646 SNRNP25Q9BV90 132 aaKnown RBP9.72□□□□□ -0.85
MSH5-218ENST00000494646 C1QTNF2Q9BXJ5 285 aa9.72□□□□□ -0.85
MSH5-218ENST00000494646 OSBPL1AQ9BXW6 950 aa9.72□□□□□ -0.85
MSH5-218ENST00000494646 SUV39H2Q9H5I1 410 aa9.72□□□□□ -0.85
MSH5-218ENST00000494646 LRRC19Q9H756 370 aa9.72□□□□□ -0.85
MSH5-218ENST00000494646 LHX3Q9UBR4 397 aa9.72□□□□□ -0.85
MSH5-218ENST00000494646 UBA2Q9UBT2 640 aaPredicted RBP9.72□□□□□ -0.85
MSH5-218ENST00000494646 KLF15Q9UIH9 416 aa9.72□□□□□ -0.85
MSH5-218ENST00000494646 RAXQ9Y2V3 346 aa9.72□□□□□ -0.85
MSH5-218ENST00000494646 COQ6Q9Y2Z9 468 aa9.72□□□□□ -0.85
MSH5-218ENST00000494646 PCDHGA1Q9Y5H4 931 aa9.72□□□□□ -0.85
MSH5-218ENST00000494646 BPTFQ12830 3046 aa9.71□□□□□ -0.85
MSH5-218ENST00000494646 DFFAO00273 331 aa9.71□□□□□ -0.86
MSH5-218ENST00000494646 FGF10O15520 208 aaPredicted RBP9.71□□□□□ -0.86
MSH5-218ENST00000494646 SPINT1O43278 529 aa9.71□□□□□ -0.86
MSH5-218ENST00000494646 PRPSAP2O60256 369 aa9.71□□□□□ -0.86
MSH5-218ENST00000494646 BUB1BO60566 1050 aaPredicted RBP9.71□□□□□ -0.86
MSH5-218ENST00000494646 TM7SF2O76062 418 aa9.71□□□□□ -0.86
MSH5-218ENST00000494646 PRKCGP05129 697 aa9.71□□□□□ -0.86
MSH5-218ENST00000494646 GIMD1P0DJR0 217 aa9.71□□□□□ -0.86
MSH5-218ENST00000494646 ERCC2P18074 760 aa9.71□□□□□ -0.86
MSH5-218ENST00000494646 XPAP23025 273 aaPredicted RBP9.71□□□□□ -0.86
MSH5-218ENST00000494646 PRKCIP41743 596 aa9.71□□□□□ -0.86
MSH5-218ENST00000494646 MLLT3P42568 568 aaPredicted RBP9.71□□□□□ -0.86
MSH5-218ENST00000494646 RABIFP47224 123 aa9.71□□□□□ -0.86
MSH5-218ENST00000494646 NDST2P52849 883 aa9.71□□□□□ -0.86
MSH5-218ENST00000494646 UBASH3AP57075 661 aa9.71□□□□□ -0.86
MSH5-218ENST00000494646 ZNF211Q13398 564 aaPredicted RBP9.71□□□□□ -0.86
MSH5-218ENST00000494646 FZD2Q14332 565 aa9.71□□□□□ -0.86
MSH5-218ENST00000494646 KLHL40Q2TBA0 621 aa9.71□□□□□ -0.86
MSH5-218ENST00000494646 PROX2Q3B8N5 592 aa9.71□□□□□ -0.86
MSH5-218ENST00000494646 HS1BP3Q53T59 392 aa9.71□□□□□ -0.86
MSH5-218ENST00000494646 HES3Q5TGS1 186 aa9.71□□□□□ -0.86
MSH5-218ENST00000494646 PPP1R2P3Q6NXS1 205 aa9.71□□□□□ -0.86
MSH5-218ENST00000494646 ARHGAP36Q6ZRI8 547 aa9.71□□□□□ -0.86
MSH5-218ENST00000494646 VPS36Q86VN1 386 aa9.71□□□□□ -0.86
MSH5-218ENST00000494646 CAMK1DQ8IU85 385 aa9.71□□□□□ -0.86
MSH5-218ENST00000494646 TP53INP2Q8IXH6 220 aa9.71□□□□□ -0.86
MSH5-218ENST00000494646 EFCAB3Q8N7B9 438 aa9.71□□□□□ -0.86
MSH5-218ENST00000494646 TSEN2Q8NCE0 465 aaKnown RBP9.71□□□□□ -0.86
MSH5-218ENST00000494646 CXorf40AQ8TE69 158 aa9.71□□□□□ -0.86
MSH5-218ENST00000494646 CASKIN2Q8WXE0 1202 aa9.71□□□□□ -0.86
MSH5-218ENST00000494646 BTBD6Q96KE9 485 aa9.71□□□□□ -0.86
MSH5-218ENST00000494646 LENG8Q96PV6 779 aaPredicted RBP9.71□□□□□ -0.86
MSH5-218ENST00000494646 NCAPGQ9BPX3 1015 aa9.71□□□□□ -0.86
MSH5-218ENST00000494646 EDEM3Q9BZQ6 932 aa9.71□□□□□ -0.86
MSH5-218ENST00000494646 MBNL1Q9NR56 388 aaKnown RBP9.71□□□□□ -0.86
MSH5-218ENST00000494646 LHX6Q9UPM6 363 aa9.71□□□□□ -0.86
MSH5-218ENST00000494646 RP1P56715 2156 aa9.71□□□□□ -0.86
MSH5-218ENST00000494646 APC2O95996 2303 aa9.71□□□□□ -0.86
MSH5-218ENST00000494646 ZFYVE26Q68DK2 2539 aa9.7□□□□□ -0.86
MSH5-218ENST00000494646 SPTY2D1-AS1A0A0U1RR47 76 aa9.7□□□□□ -0.86
MSH5-218ENST00000494646 TTC24A2A3L6 582 aaPredicted RBP9.7□□□□□ -0.86
MSH5-218ENST00000494646 ARHGAP42A6NI28 874 aa9.7□□□□□ -0.86
MSH5-218ENST00000494646 AREL1O15033 823 aa9.7□□□□□ -0.86
MSH5-218ENST00000494646 SCAMP1O15126 338 aa9.7□□□□□ -0.86
MSH5-218ENST00000494646 PRAMEF11O60813 436 aa9.7□□□□□ -0.86
MSH5-218ENST00000494646 LRCH4O75427 683 aa9.7□□□□□ -0.86
MSH5-218ENST00000494646 PALMO75781 387 aa9.7□□□□□ -0.86
MSH5-218ENST00000494646 CSF2P04141 144 aa9.7□□□□□ -0.86
MSH5-218ENST00000494646 TCF4P15884 667 aa9.7□□□□□ -0.86
MSH5-218ENST00000494646 AMPD1P23109 780 aa9.7□□□□□ -0.86
MSH5-218ENST00000494646 ACP1P24666 158 aa9.7□□□□□ -0.86
MSH5-218ENST00000494646 RGRP47804 291 aa9.7□□□□□ -0.86
MSH5-218ENST00000494646 HNRNPKP61978 463 aaKnown RBP eCLIP9.7□□□□□ -0.86
MSH5-218ENST00000494646 TPM4P67936 248 aa9.7□□□□□ -0.86
MSH5-218ENST00000494646 INSM1Q01101 510 aaPredicted RBP9.7□□□□□ -0.86
MSH5-218ENST00000494646 EIF2B5Q13144 721 aaKnown RBP9.7□□□□□ -0.86
MSH5-218ENST00000494646 C1orf61Q13536 156 aa9.7□□□□□ -0.86
MSH5-218ENST00000494646 NFKBIBQ15653 356 aa9.7□□□□□ -0.86
MSH5-218ENST00000494646 TDRD12Q587J7 1177 aaKnown RBP9.7□□□□□ -0.86
MSH5-218ENST00000494646 TMCO4Q5TGY1 634 aa9.7□□□□□ -0.86
MSH5-218ENST00000494646 KYAT3Q6YP21 454 aaKnown RBP9.7□□□□□ -0.86
MSH5-218ENST00000494646 SRLQ86TD4 932 aa9.7□□□□□ -0.86
MSH5-218ENST00000494646 DCP2Q8IU60 420 aaKnown RBP9.7□□□□□ -0.86
MSH5-218ENST00000494646 ARHGAP12Q8IWW6 846 aa9.7□□□□□ -0.86
MSH5-218ENST00000494646 OR4C6Q8NH72 309 aa9.7□□□□□ -0.86
MSH5-218ENST00000494646 FAM174AQ8TBP5 190 aa9.7□□□□□ -0.86
MSH5-218ENST00000494646 LMX1AQ8TE12 382 aa9.7□□□□□ -0.86
MSH5-218ENST00000494646 HSPH1Q92598 858 aa9.7□□□□□ -0.86
MSH5-218ENST00000494646 CENPTQ96BT3 561 aa9.7□□□□□ -0.86
MSH5-218ENST00000494646 ARHGEF26Q96DR7 871 aa9.7□□□□□ -0.86
MSH5-218ENST00000494646 APOLD1Q96LR9 279 aa9.7□□□□□ -0.86
MSH5-218ENST00000494646 CPEB1Q9BZB8 566 aaKnown RBP9.7□□□□□ -0.86
MSH5-218ENST00000494646 ISCUQ9H1K1 167 aa9.7□□□□□ -0.86
MSH5-218ENST00000494646 TCEAL2Q9H3H9 227 aaPredicted RBP9.7□□□□□ -0.86
MSH5-218ENST00000494646 ZWILCHQ9H900 591 aa9.7□□□□□ -0.86
MSH5-218ENST00000494646 SP110Q9HB58 689 aa9.7□□□□□ -0.86
MSH5-218ENST00000494646 PDFQ9HBH1 243 aa9.7□□□□□ -0.86
MSH5-218ENST00000494646 MRPL47Q9HD33 250 aaKnown RBP9.7□□□□□ -0.86
MSH5-218ENST00000494646 CWC15Q9P013 229 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms