RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 SLC30A5Q8TAD4 765 aa9.76□□□□□ -0.85
UBR4-216ENST00000494503 GPT2Q8TD30 523 aa9.76□□□□□ -0.85
UBR4-216ENST00000494503 SLC20A1Q8WUM9 679 aa9.76□□□□□ -0.85
UBR4-216ENST00000494503 RXFP2Q8WXD0 754 aa9.76□□□□□ -0.85
UBR4-216ENST00000494503 ARHGEF2Q92974 986 aaKnown RBP9.76□□□□□ -0.85
UBR4-216ENST00000494503 NT5C3BQ969T7 300 aa9.76□□□□□ -0.85
UBR4-216ENST00000494503 EXOC2Q96KP1 924 aa9.76□□□□□ -0.85
UBR4-216ENST00000494503 PCMTD1Q96MG8 357 aaPredicted RBP9.76□□□□□ -0.85
UBR4-216ENST00000494503 LENG8Q96PV6 779 aaPredicted RBP9.76□□□□□ -0.85
UBR4-216ENST00000494503 KLF6Q99612 283 aaPredicted RBP9.76□□□□□ -0.85
UBR4-216ENST00000494503 ARHGAP9Q9BRR9 750 aa9.76□□□□□ -0.85
UBR4-216ENST00000494503 C1QTNF2Q9BXJ5 285 aa9.76□□□□□ -0.85
UBR4-216ENST00000494503 FOXP3Q9BZS1 431 aa9.76□□□□□ -0.85
UBR4-216ENST00000494503 RAB6CQ9H0N0 254 aa9.76□□□□□ -0.85
UBR4-216ENST00000494503 TMEM51Q9NW97 253 aa9.76□□□□□ -0.85
UBR4-216ENST00000494503 PPARGC1AQ9UBK2 798 aaKnown RBP9.76□□□□□ -0.85
UBR4-216ENST00000494503 DACH1Q9UI36 760 aa9.76□□□□□ -0.85
UBR4-216ENST00000494503 PADI4Q9UM07 663 aa9.76□□□□□ -0.85
UBR4-216ENST00000494503 COQ6Q9Y2Z9 468 aa9.76□□□□□ -0.85
UBR4-216ENST00000494503 HEMK1Q9Y5R4 338 aaPredicted RBP9.76□□□□□ -0.85
UBR4-216ENST00000494503 AHCTF1Q8WYP5 2266 aa9.76□□□□□ -0.85
UBR4-216ENST00000494503 CCDC187A0A096LP49 1063 aa9.75□□□□□ -0.85
UBR4-216ENST00000494503 LMO7DNF2Z398 122 aa9.75□□□□□ -0.85
UBR4-216ENST00000494503 F8VZ95 297 aa9.75□□□□□ -0.85
UBR4-216ENST00000494503 TPP1O14773 563 aa9.75□□□□□ -0.85
UBR4-216ENST00000494503 YY2O15391 372 aa9.75□□□□□ -0.85
UBR4-216ENST00000494503 CREB3O43889 395 aa9.75□□□□□ -0.85
UBR4-216ENST00000494503 LZTS3O60299 673 aaPredicted RBP9.75□□□□□ -0.85
UBR4-216ENST00000494503 TCEA3O75764 348 aa9.75□□□□□ -0.85
UBR4-216ENST00000494503 LRIG2O94898 1065 aa9.75□□□□□ -0.85
UBR4-216ENST00000494503 PIGNO95427 931 aa9.75□□□□□ -0.85
UBR4-216ENST00000494503 PCCBP05166 539 aa9.75□□□□□ -0.85
UBR4-216ENST00000494503 RPLP0P05388 317 aaKnown RBP9.75□□□□□ -0.85
UBR4-216ENST00000494503 TPM2P07951 284 aa9.75□□□□□ -0.85
UBR4-216ENST00000494503 CELA2BP08218 269 aaPredicted RBP9.75□□□□□ -0.85
UBR4-216ENST00000494503 PLEKP08567 350 aaPredicted RBP9.75□□□□□ -0.85
UBR4-216ENST00000494503 JMJD7P0C870 316 aa9.75□□□□□ -0.85
UBR4-216ENST00000494503 C6P13671 934 aa9.75□□□□□ -0.85
UBR4-216ENST00000494503 UCHL3P15374 230 aa9.75□□□□□ -0.85
UBR4-216ENST00000494503 RHOQP17081 205 aa9.75□□□□□ -0.85
UBR4-216ENST00000494503 ITIH2P19823 946 aa9.75□□□□□ -0.85
UBR4-216ENST00000494503 HTR1BP28222 390 aa9.75□□□□□ -0.85
UBR4-216ENST00000494503 EPHB2P29323 1055 aa9.75□□□□□ -0.85
UBR4-216ENST00000494503 CDH5P33151 784 aaPredicted RBP9.75□□□□□ -0.85
UBR4-216ENST00000494503 ADRA1BP35368 520 aa9.75□□□□□ -0.85
UBR4-216ENST00000494503 BLKP51451 505 aa9.75□□□□□ -0.85
UBR4-216ENST00000494503 PFN3P60673 137 aa9.75□□□□□ -0.85
UBR4-216ENST00000494503 UBE2HP62256 183 aa9.75□□□□□ -0.85
UBR4-216ENST00000494503 NOMO3P69849 1222 aa9.75□□□□□ -0.85
UBR4-216ENST00000494503 IRF4Q15306 451 aa9.75□□□□□ -0.85
UBR4-216ENST00000494503 ELOCQ15369 112 aa9.75□□□□□ -0.85
UBR4-216ENST00000494503 KLHDC7AQ5VTJ3 777 aa9.75□□□□□ -0.85
UBR4-216ENST00000494503 ENPP7Q6UWV6 458 aa9.75□□□□□ -0.85
UBR4-216ENST00000494503 MACC1Q6ZN28 852 aa9.75□□□□□ -0.85
UBR4-216ENST00000494503 SDR16C5Q8N3Y7 309 aa9.75□□□□□ -0.85
UBR4-216ENST00000494503 FBXO39Q8N4B4 442 aa9.75□□□□□ -0.85
UBR4-216ENST00000494503 CCDC185Q8N715 623 aa9.75□□□□□ -0.85
UBR4-216ENST00000494503 Q8N9G6 341 aaPredicted RBP9.75□□□□□ -0.85
UBR4-216ENST00000494503 KYQ8NBH2 561 aa9.75□□□□□ -0.85
UBR4-216ENST00000494503 FAM172AQ8WUF8 416 aa9.75□□□□□ -0.85
UBR4-216ENST00000494503 TSACCQ96A04 125 aaPredicted RBP9.75□□□□□ -0.85
UBR4-216ENST00000494503 CCDC74AQ96AQ1 378 aa9.75□□□□□ -0.85
UBR4-216ENST00000494503 ISG20Q96AZ6 181 aaKnown RBP9.75□□□□□ -0.85
UBR4-216ENST00000494503 SLC46A1Q96NT5 459 aa9.75□□□□□ -0.85
UBR4-216ENST00000494503 GFM1Q96RP9 751 aaKnown RBP9.75□□□□□ -0.85
UBR4-216ENST00000494503 SELENOOQ9BVL4 669 aa9.75□□□□□ -0.85
UBR4-216ENST00000494503 CPEB1Q9BZB8 566 aaKnown RBP9.75□□□□□ -0.85
UBR4-216ENST00000494503 SEMA4CQ9C0C4 833 aa9.75□□□□□ -0.85
UBR4-216ENST00000494503 STRADBQ9C0K7 418 aa9.75□□□□□ -0.85
UBR4-216ENST00000494503 MAGEH1Q9H213 219 aa9.75□□□□□ -0.85
UBR4-216ENST00000494503 SUDS3Q9H7L9 328 aaPredicted RBP9.75□□□□□ -0.85
UBR4-216ENST00000494503 MBNL1Q9NR56 388 aaKnown RBP9.75□□□□□ -0.85
UBR4-216ENST00000494503 GPR27Q9NS67 375 aa9.75□□□□□ -0.85
UBR4-216ENST00000494503 TMEM248Q9NWD8 314 aa9.75□□□□□ -0.85
UBR4-216ENST00000494503 TAB2Q9NYJ8 693 aa9.75□□□□□ -0.85
UBR4-216ENST00000494503 ZNF212Q9UDV6 495 aa9.75□□□□□ -0.85
UBR4-216ENST00000494503 KLQ9UEF7 1012 aa9.75□□□□□ -0.85
UBR4-216ENST00000494503 PISDQ9UG56 409 aa9.75□□□□□ -0.85
UBR4-216ENST00000494503 MOSPD1Q9UJG1 213 aa9.75□□□□□ -0.85
UBR4-216ENST00000494503 TMEM59LQ9UK28 342 aa9.75□□□□□ -0.85
UBR4-216ENST00000494503 GPR34Q9UPC5 381 aa9.75□□□□□ -0.85
UBR4-216ENST00000494503 SPTA1P02549 2419 aa9.75□□□□□ -0.85
UBR4-216ENST00000494503 A0A1W2PNU3 283 aaPredicted RBP9.74□□□□□ -0.85
UBR4-216ENST00000494503 ANKRD62A6NC57 917 aa9.74□□□□□ -0.85
UBR4-216ENST00000494503 FAM72CH0Y354 149 aa9.74□□□□□ -0.85
UBR4-216ENST00000494503 RIOK3O14730 519 aaKnown RBP9.74□□□□□ -0.85
UBR4-216ENST00000494503 PLD2O14939 933 aa9.74□□□□□ -0.85
UBR4-216ENST00000494503 RASGRP1O95267 797 aa9.74□□□□□ -0.85
UBR4-216ENST00000494503 CD160O95971 181 aa9.74□□□□□ -0.85
UBR4-216ENST00000494503 ALPIP09923 528 aa9.74□□□□□ -0.85
UBR4-216ENST00000494503 HGFP14210 728 aa9.74□□□□□ -0.85
UBR4-216ENST00000494503 NSFP46459 744 aaKnown RBP9.74□□□□□ -0.85
UBR4-216ENST00000494503 PPM1FP49593 454 aaPredicted RBP9.74□□□□□ -0.85
UBR4-216ENST00000494503 YPEL5P62699 121 aa9.74□□□□□ -0.85
UBR4-216ENST00000494503 LRRC14Q15048 493 aa9.74□□□□□ -0.85
UBR4-216ENST00000494503 DPCR1Q3MIW9 517 aa9.74□□□□□ -0.85
UBR4-216ENST00000494503 CCDC14Q49A88 953 aa9.74□□□□□ -0.85
UBR4-216ENST00000494503 EFHC2Q5JST6 749 aa9.74□□□□□ -0.85
UBR4-216ENST00000494503 MIIPQ5JXC2 388 aa9.74□□□□□ -0.85
UBR4-216ENST00000494503 FAM72AQ5TYM5 149 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms