RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 ZNF668Q96K58 619 aaPredicted RBP2.34□□□□□ -2.03
PTPN12-212ENST00000494248 CABS1Q96KC9 395 aa2.34□□□□□ -2.03
PTPN12-212ENST00000494248 CNDP1Q96KN2 507 aa2.34□□□□□ -2.03
PTPN12-212ENST00000494248 RUNDC3BQ96NL0 473 aa2.34□□□□□ -2.03
PTPN12-212ENST00000494248 TMEM237Q96Q45 408 aa2.34□□□□□ -2.03
PTPN12-212ENST00000494248 FNBP1Q96RU3 617 aa2.34□□□□□ -2.03
PTPN12-212ENST00000494248 CRACR2AQ9BSW2 395 aa2.34□□□□□ -2.03
PTPN12-212ENST00000494248 TCHPQ9BT92 498 aa2.34□□□□□ -2.03
PTPN12-212ENST00000494248 MXD3Q9BW11 206 aa2.34□□□□□ -2.03
PTPN12-212ENST00000494248 ACAT2Q9BWD1 397 aa2.34□□□□□ -2.03
PTPN12-212ENST00000494248 SF3B5Q9BWJ5 86 aaKnown RBP2.34□□□□□ -2.03
PTPN12-212ENST00000494248 TRIM54Q9BYV2 358 aa2.34□□□□□ -2.03
PTPN12-212ENST00000494248 TNMDQ9H2S6 317 aa2.34□□□□□ -2.03
PTPN12-212ENST00000494248 MROH8Q9H579 483 aa2.34□□□□□ -2.03
PTPN12-212ENST00000494248 ZNF287Q9HBT7 754 aa2.34□□□□□ -2.03
PTPN12-212ENST00000494248 SAYSD1Q9NPB0 183 aa2.34□□□□□ -2.03
PTPN12-212ENST00000494248 TCF7L2Q9NQB0 619 aa2.34□□□□□ -2.03
PTPN12-212ENST00000494248 EIF2B3Q9NR50 452 aaKnown RBP2.34□□□□□ -2.03
PTPN12-212ENST00000494248 CGNQ9P2M7 1197 aaKnown RBP2.34□□□□□ -2.03
PTPN12-212ENST00000494248 UBA2Q9UBT2 640 aaPredicted RBP2.34□□□□□ -2.03
PTPN12-212ENST00000494248 MORF4L1Q9UBU8 362 aa2.34□□□□□ -2.03
PTPN12-212ENST00000494248 IPO11Q9UI26 975 aaKnown RBP2.34□□□□□ -2.03
PTPN12-212ENST00000494248 HOOK1Q9UJC3 728 aaKnown RBP2.34□□□□□ -2.03
PTPN12-212ENST00000494248 SLC39A10Q9ULF5 831 aa2.34□□□□□ -2.03
PTPN12-212ENST00000494248 PCDHA12Q9UN75 941 aa2.34□□□□□ -2.03
PTPN12-212ENST00000494248 ITM2BQ9Y287 266 aa2.34□□□□□ -2.03
PTPN12-212ENST00000494248 KRT87PA6NCN2 255 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 C2CD4BA6NLJ0 364 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 TTC34A8MYJ7 566 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 ISM1B1AKI9 464 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 ZNF814B7Z6K7 855 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 F8W810 466 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 UBXN8O00124 270 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 AP3B1O00203 1094 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 CTAGE5O15320 804 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 CD3EAPO15446 510 aaKnown RBP2.33□□□□□ -2.04
PTPN12-212ENST00000494248 STX6O43752 255 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 PRPSAP2O60256 369 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 SYNCRIPO60506 623 aaKnown RBP2.33□□□□□ -2.04
PTPN12-212ENST00000494248 UGDHO60701 494 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 KERAO60938 352 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 MTRF1O75570 445 aaKnown RBP2.33□□□□□ -2.04
PTPN12-212ENST00000494248 PIAS2O75928 621 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 BEST1O76090 585 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 DDNO94850 711 aaPredicted RBP2.33□□□□□ -2.04
PTPN12-212ENST00000494248 PGM3O95394 542 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 HEXBP07686 556 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 SNRNP70P08621 437 aaKnown RBP2.33□□□□□ -2.04
PTPN12-212ENST00000494248 ITGA5P08648 1049 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 TMIGD3P0DMS9 266 aaPredicted RBP2.33□□□□□ -2.04
PTPN12-212ENST00000494248 KITP10721 976 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 FERP16591 822 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 PTPN2P17706 415 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 CD9P21926 228 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 IL10P22301 178 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 TMOD1P28289 359 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 EEF1DP29692 281 aaKnown RBP2.33□□□□□ -2.04
PTPN12-212ENST00000494248 PBLDP30039 288 aaPredicted RBP2.33□□□□□ -2.04
PTPN12-212ENST00000494248 IFNAR2P48551 515 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 PTDSS1P48651 473 aaKnown RBP2.33□□□□□ -2.04
PTPN12-212ENST00000494248 TAF6P49848 677 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 ENTPD1P49961 510 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 CCR5P51681 352 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 ZNF41P51814 821 aaPredicted RBP2.33□□□□□ -2.04
PTPN12-212ENST00000494248 ARFIP2P53365 341 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 RAD23AP54725 363 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 RRP1P56182 461 aaKnown RBP2.33□□□□□ -2.04
PTPN12-212ENST00000494248 POLE2P56282 527 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 SLC26A5P58743 744 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 GPC5P78333 572 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 HTD2P86397 168 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 TIAL1Q01085 375 aaKnown RBP eCLIP2.33□□□□□ -2.04
PTPN12-212ENST00000494248 MC1RQ01726 317 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 YWHAHQ04917 246 aaPredicted RBP2.33□□□□□ -2.04
PTPN12-212ENST00000494248 PPATQ06203 517 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 CHRNDQ07001 517 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 LRMPQ12912 555 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 EPS8Q12929 822 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 STK4Q13043 487 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 MAMLD1Q13495 774 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 ARHGEF7Q14155 803 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 SLC29A2Q14542 456 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 KPNB1Q14974 876 aaKnown RBP2.33□□□□□ -2.04
PTPN12-212ENST00000494248 MORF4L2Q15014 288 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 PPP1R7Q15435 360 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 ALG11Q2TAA5 492 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 RABL6Q3YEC7 729 aaPredicted RBP2.33□□□□□ -2.04
PTPN12-212ENST00000494248 CTXN3Q4LDR2 81 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 CEP55Q53EZ4 464 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 CAVIN4Q5BKX8 364 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 TCP11X2Q5H9J9 407 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 KRBOX4Q5JUW0 171 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 ATPAF1Q5TC12 328 aaPredicted RBP2.33□□□□□ -2.04
PTPN12-212ENST00000494248 KLHDC7AQ5VTJ3 777 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 SNX30Q5VWJ9 437 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 CTR9Q6PD62 1173 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 DCLRE1AQ6PJP8 1040 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 ANGPTL8Q6UXH0 198 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 CHD1LQ86WJ1 897 aa2.33□□□□□ -2.04
PTPN12-212ENST00000494248 KIAA2013Q8IYS2 634 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms