RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 CCDC15Q0P6D6 951 aa14.71□□□□□ -0.05
BRCA1-223ENST00000494123 PRPSAP1Q14558 356 aa14.71□□□□□ -0.05
BRCA1-223ENST00000494123 WHAMMP3Q1A5X7 153 aa14.71□□□□□ -0.05
BRCA1-223ENST00000494123 ZNF805Q5CZA5 627 aa14.71□□□□□ -0.05
BRCA1-223ENST00000494123 TTC27Q6P3X3 843 aa14.71□□□□□ -0.05
BRCA1-223ENST00000494123 MAML2Q8IZL2 1156 aaPredicted RBP14.71□□□□□ -0.05
BRCA1-223ENST00000494123 HDDC3Q8N4P3 179 aa14.71□□□□□ -0.05
BRCA1-223ENST00000494123 PPP1R2P1Q96PQ5 205 aa14.71□□□□□ -0.05
BRCA1-223ENST00000494123 FCRL5Q96RD9 977 aa14.71□□□□□ -0.05
BRCA1-223ENST00000494123 PCDHGC4Q9Y5F7 938 aa14.71□□□□□ -0.05
BRCA1-223ENST00000494123 CCDC163A0A0D9SF12 145 aa14.7□□□□□ -0.06
BRCA1-223ENST00000494123 A0A1W2PP55 124 aa14.7□□□□□ -0.06
BRCA1-223ENST00000494123 C16orf96A6NNT2 1141 aa14.7□□□□□ -0.06
BRCA1-223ENST00000494123 SOCS5O75159 536 aa14.7□□□□□ -0.06
BRCA1-223ENST00000494123 GAS8O95995 478 aa14.7□□□□□ -0.06
BRCA1-223ENST00000494123 XPAP23025 273 aaPredicted RBP14.7□□□□□ -0.06
BRCA1-223ENST00000494123 TNNT3P45378 269 aaPredicted RBP14.7□□□□□ -0.06
BRCA1-223ENST00000494123 FNTBP49356 437 aa14.7□□□□□ -0.06
BRCA1-223ENST00000494123 TPMTP51580 245 aa14.7□□□□□ -0.06
BRCA1-223ENST00000494123 METAP1P53582 386 aa14.7□□□□□ -0.06
BRCA1-223ENST00000494123 DMWDQ09019 674 aa14.7□□□□□ -0.06
BRCA1-223ENST00000494123 USP39Q53GS9 565 aaKnown RBP14.7□□□□□ -0.06
BRCA1-223ENST00000494123 FBXL19Q6PCT2 694 aa14.7□□□□□ -0.06
BRCA1-223ENST00000494123 USP30Q70CQ3 517 aa14.7□□□□□ -0.06
BRCA1-223ENST00000494123 FAM124AQ86V42 546 aa14.7□□□□□ -0.06
BRCA1-223ENST00000494123 KBTBD6Q86V97 674 aa14.7□□□□□ -0.06
BRCA1-223ENST00000494123 LONP2Q86WA8 852 aa14.7□□□□□ -0.06
BRCA1-223ENST00000494123 KLHL7Q8IXQ5 586 aa14.7□□□□□ -0.06
BRCA1-223ENST00000494123 AADATQ8N5Z0 425 aa14.7□□□□□ -0.06
BRCA1-223ENST00000494123 ARRDC3Q96B67 414 aa14.7□□□□□ -0.06
BRCA1-223ENST00000494123 SPACA7Q96KW9 195 aa14.7□□□□□ -0.06
BRCA1-223ENST00000494123 RUNDC3BQ96NL0 473 aa14.7□□□□□ -0.06
BRCA1-223ENST00000494123 FAM126AQ9BYI3 521 aaPredicted RBP14.7□□□□□ -0.06
BRCA1-223ENST00000494123 ITM2CQ9NQX7 267 aa14.7□□□□□ -0.06
BRCA1-223ENST00000494123 CYP8B1Q9UNU6 501 aa14.7□□□□□ -0.06
BRCA1-223ENST00000494123 RAI2Q9Y5P3 530 aa14.7□□□□□ -0.06
BRCA1-223ENST00000494123 MRFAP1Q9Y605 127 aa14.7□□□□□ -0.06
BRCA1-223ENST00000494123 GOLGA6CA6NDK9 693 aa14.7□□□□□ -0.06
BRCA1-223ENST00000494123 GOLGA6BA6NDN3 693 aa14.7□□□□□ -0.06
BRCA1-223ENST00000494123 PLK4O00444 970 aa14.7□□□□□ -0.06
BRCA1-223ENST00000494123 ANXA9O76027 345 aa14.7□□□□□ -0.06
BRCA1-223ENST00000494123 ECEL1O95672 775 aa14.7□□□□□ -0.06
BRCA1-223ENST00000494123 MT-CYBP00156 380 aaPredicted RBP14.7□□□□□ -0.06
BRCA1-223ENST00000494123 MMP2P08253 660 aa14.7□□□□□ -0.06
BRCA1-223ENST00000494123 GOLGA6DP0CG33 693 aa14.7□□□□□ -0.06
BRCA1-223ENST00000494123 TDGF1P13385 188 aa14.7□□□□□ -0.06
BRCA1-223ENST00000494123 PSMB4P28070 264 aa14.7□□□□□ -0.06
BRCA1-223ENST00000494123 NEK3P51956 506 aa14.7□□□□□ -0.06
BRCA1-223ENST00000494123 SKOR1P84550 965 aa14.7□□□□□ -0.06
BRCA1-223ENST00000494123 CNTN1Q12860 1018 aa14.7□□□□□ -0.06
BRCA1-223ENST00000494123 TRAF2Q12933 501 aa14.7□□□□□ -0.06
BRCA1-223ENST00000494123 PCSK7Q16549 785 aa14.7□□□□□ -0.06
BRCA1-223ENST00000494123 ZNF528Q3MIS6 628 aa14.7□□□□□ -0.06
BRCA1-223ENST00000494123 ARMC12Q5T9G4 340 aa14.7□□□□□ -0.06
BRCA1-223ENST00000494123 BRAT1Q6PJG6 821 aa14.7□□□□□ -0.06
BRCA1-223ENST00000494123 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.7□□□□□ -0.06
BRCA1-223ENST00000494123 ERN2Q76MJ5 926 aaKnown RBP14.7□□□□□ -0.06
BRCA1-223ENST00000494123 PARS2Q7L3T8 475 aaKnown RBP14.7□□□□□ -0.06
BRCA1-223ENST00000494123 PRPF39Q86UA1 669 aaKnown RBP14.7□□□□□ -0.06
BRCA1-223ENST00000494123 TAB3Q8N5C8 712 aaPredicted RBP14.7□□□□□ -0.06
BRCA1-223ENST00000494123 SPATA22Q8NHS9 363 aa14.7□□□□□ -0.06
BRCA1-223ENST00000494123 HCAR2Q8TDS4 363 aa14.7□□□□□ -0.06
BRCA1-223ENST00000494123 IFT43Q96FT9 208 aa14.7□□□□□ -0.06
BRCA1-223ENST00000494123 NSMCE3Q96MG7 304 aa14.7□□□□□ -0.06
BRCA1-223ENST00000494123 VPS45Q9NRW7 570 aa14.7□□□□□ -0.06
BRCA1-223ENST00000494123 GOLGA6AQ9NYA3 693 aa14.7□□□□□ -0.06
BRCA1-223ENST00000494123 UBP1Q9NZI7 540 aa14.7□□□□□ -0.06
BRCA1-223ENST00000494123 PAK5Q9P286 719 aa14.7□□□□□ -0.06
BRCA1-223ENST00000494123 DKK3Q9UBP4 350 aa14.7□□□□□ -0.06
BRCA1-223ENST00000494123 FAM153AQ9UHL3 310 aa14.7□□□□□ -0.06
BRCA1-223ENST00000494123 PCDHB9Q9Y5E1 797 aa14.7□□□□□ -0.06
BRCA1-223ENST00000494123 A0A1W2PQ67 120 aa14.69□□□□□ -0.06
BRCA1-223ENST00000494123 PMPCBO75439 489 aa14.69□□□□□ -0.06
BRCA1-223ENST00000494123 KRT14P02533 472 aa14.69□□□□□ -0.06
BRCA1-223ENST00000494123 SP9P0CG40 484 aa14.69□□□□□ -0.06
BRCA1-223ENST00000494123 C7P10643 843 aa14.69□□□□□ -0.06
BRCA1-223ENST00000494123 ETS1P14921 441 aa14.69□□□□□ -0.06
BRCA1-223ENST00000494123 OXTRP30559 389 aa14.69□□□□□ -0.06
BRCA1-223ENST00000494123 DRD3P35462 400 aa14.69□□□□□ -0.06
BRCA1-223ENST00000494123 P2RY2P41231 377 aa14.69□□□□□ -0.06
BRCA1-223ENST00000494123 GEMP55040 296 aa14.69□□□□□ -0.06
BRCA1-223ENST00000494123 POLR2LP62875 67 aaKnown RBP14.69□□□□□ -0.06
BRCA1-223ENST00000494123 PPP1R7Q15435 360 aa14.69□□□□□ -0.06
BRCA1-223ENST00000494123 SLC14A2Q15849 920 aa14.69□□□□□ -0.06
BRCA1-223ENST00000494123 PARP6Q2NL67 630 aa14.69□□□□□ -0.06
BRCA1-223ENST00000494123 C4orf22Q6V702 233 aa14.69□□□□□ -0.06
BRCA1-223ENST00000494123 PRUNE1Q86TP1 453 aa14.69□□□□□ -0.06
BRCA1-223ENST00000494123 WDR5BQ86VZ2 330 aa14.69□□□□□ -0.06
BRCA1-223ENST00000494123 SPATA4Q8NEY3 305 aa14.69□□□□□ -0.06
BRCA1-223ENST00000494123 RLN3Q8WXF3 142 aa14.69□□□□□ -0.06
BRCA1-223ENST00000494123 VOPP1Q96AW1 172 aa14.69□□□□□ -0.06
BRCA1-223ENST00000494123 LRRC45Q96CN5 670 aa14.69□□□□□ -0.06
BRCA1-223ENST00000494123 PRRX2Q99811 253 aa14.69□□□□□ -0.06
BRCA1-223ENST00000494123 TDRD1Q9BXT4 1180 aaKnown RBP14.69□□□□□ -0.06
BRCA1-223ENST00000494123 HDAC8Q9BY41 377 aa14.69□□□□□ -0.06
BRCA1-223ENST00000494123 CD93Q9NPY3 652 aa14.69□□□□□ -0.06
BRCA1-223ENST00000494123 USP36Q9P275 1121 aaKnown RBP14.69□□□□□ -0.06
BRCA1-223ENST00000494123 SERGEFQ9UGK8 458 aa14.69□□□□□ -0.06
BRCA1-223ENST00000494123 FZD4Q9ULV1 537 aa14.69□□□□□ -0.06
BRCA1-223ENST00000494123 AAR2Q9Y312 384 aaKnown RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms