RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 KLHL40Q2TBA0 621 aa8.65□□□□□ -1.02
LRCH3-219ENST00000494069 INAVAQ3KP66 663 aa8.65□□□□□ -1.02
LRCH3-219ENST00000494069 PARP15Q460N3 678 aa8.65□□□□□ -1.02
LRCH3-219ENST00000494069 INO80DQ53TQ3 878 aaPredicted RBP8.65□□□□□ -1.02
LRCH3-219ENST00000494069 ERMARDQ5T6L9 678 aa8.65□□□□□ -1.02
LRCH3-219ENST00000494069 TXNRD3NBQ6F5E7 133 aa8.65□□□□□ -1.02
LRCH3-219ENST00000494069 GDPD4Q6W3E5 623 aa8.65□□□□□ -1.02
LRCH3-219ENST00000494069 PTAR1Q7Z6K3 402 aaPredicted RBP8.65□□□□□ -1.02
LRCH3-219ENST00000494069 TTC7BQ86TV6 843 aa8.65□□□□□ -1.02
LRCH3-219ENST00000494069 ZSWIM9Q86XI8 627 aa8.65□□□□□ -1.02
LRCH3-219ENST00000494069 ARHGAP12Q8IWW6 846 aa8.65□□□□□ -1.02
LRCH3-219ENST00000494069 OXR1Q8N573 874 aa8.65□□□□□ -1.02
LRCH3-219ENST00000494069 BTBD6Q96KE9 485 aa8.65□□□□□ -1.02
LRCH3-219ENST00000494069 NSMCE3Q96MG7 304 aa8.65□□□□□ -1.02
LRCH3-219ENST00000494069 GDAP1L1Q96MZ0 367 aa8.65□□□□□ -1.02
LRCH3-219ENST00000494069 C1QTNF2Q9BXJ5 285 aa8.65□□□□□ -1.02
LRCH3-219ENST00000494069 ISCUQ9H1K1 167 aa8.65□□□□□ -1.02
LRCH3-219ENST00000494069 KLF15Q9UIH9 416 aa8.65□□□□□ -1.02
LRCH3-219ENST00000494069 VPS9D1Q9Y2B5 631 aa8.65□□□□□ -1.02
LRCH3-219ENST00000494069 TDRD6O60522 2096 aaKnown RBP8.65□□□□□ -1.03
LRCH3-219ENST00000494069 ZSCAN5CA6NGD5 496 aaPredicted RBP8.64□□□□□ -1.03
LRCH3-219ENST00000494069 A6NNZ2 444 aa8.64□□□□□ -1.03
LRCH3-219ENST00000494069 EEF2KO00418 725 aaKnown RBP8.64□□□□□ -1.03
LRCH3-219ENST00000494069 NEMP1O14524 444 aa8.64□□□□□ -1.03
LRCH3-219ENST00000494069 MUSKO15146 869 aa8.64□□□□□ -1.03
LRCH3-219ENST00000494069 YKT6O15498 198 aa8.64□□□□□ -1.03
LRCH3-219ENST00000494069 FGF10O15520 208 aaPredicted RBP8.64□□□□□ -1.03
LRCH3-219ENST00000494069 TSPAN6O43657 245 aa8.64□□□□□ -1.03
LRCH3-219ENST00000494069 MAGEC1O60732 1142 aa8.64□□□□□ -1.03
LRCH3-219ENST00000494069 PRAMEF11O60813 436 aa8.64□□□□□ -1.03
LRCH3-219ENST00000494069 RFPL3O75679 317 aa8.64□□□□□ -1.03
LRCH3-219ENST00000494069 PIAS2O75928 621 aa8.64□□□□□ -1.03
LRCH3-219ENST00000494069 NEBLO76041 1014 aa8.64□□□□□ -1.03
LRCH3-219ENST00000494069 IGSF6O95976 241 aa8.64□□□□□ -1.03
LRCH3-219ENST00000494069 NDST2P52849 883 aa8.64□□□□□ -1.03
LRCH3-219ENST00000494069 UBASH3AP57075 661 aa8.64□□□□□ -1.03
LRCH3-219ENST00000494069 PFN3P60673 137 aa8.64□□□□□ -1.03
LRCH3-219ENST00000494069 CYP4F3Q08477 520 aa8.64□□□□□ -1.03
LRCH3-219ENST00000494069 SGCGQ13326 291 aa8.64□□□□□ -1.03
LRCH3-219ENST00000494069 FZD2Q14332 565 aa8.64□□□□□ -1.03
LRCH3-219ENST00000494069 SMTNL2Q2TAL5 461 aa8.64□□□□□ -1.03
LRCH3-219ENST00000494069 PROX2Q3B8N5 592 aa8.64□□□□□ -1.03
LRCH3-219ENST00000494069 PPP6R3Q5H9R7 873 aaPredicted RBP8.64□□□□□ -1.03
LRCH3-219ENST00000494069 FIGNQ5HY92 759 aa8.64□□□□□ -1.03
LRCH3-219ENST00000494069 AFMIDQ63HM1 303 aa8.64□□□□□ -1.03
LRCH3-219ENST00000494069 KIAA1161Q6NSJ0 714 aa8.64□□□□□ -1.03
LRCH3-219ENST00000494069 KYAT3Q6YP21 454 aaKnown RBP8.64□□□□□ -1.03
LRCH3-219ENST00000494069 RFX8Q6ZV50 586 aa8.64□□□□□ -1.03
LRCH3-219ENST00000494069 NYAP1Q6ZVC0 841 aa8.64□□□□□ -1.03
LRCH3-219ENST00000494069 PROSER1Q86XN7 944 aa8.64□□□□□ -1.03
LRCH3-219ENST00000494069 CPNE8Q86YQ8 564 aa8.64□□□□□ -1.03
LRCH3-219ENST00000494069 CAMK1DQ8IU85 385 aa8.64□□□□□ -1.03
LRCH3-219ENST00000494069 TSEN2Q8NCE0 465 aaKnown RBP8.64□□□□□ -1.03
LRCH3-219ENST00000494069 FNIP1Q8TF40 1166 aa8.64□□□□□ -1.03
LRCH3-219ENST00000494069 ARHGEF26Q96DR7 871 aa8.64□□□□□ -1.03
LRCH3-219ENST00000494069 LRIG1Q96JA1 1093 aa8.64□□□□□ -1.03
LRCH3-219ENST00000494069 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.64□□□□□ -1.03
LRCH3-219ENST00000494069 WRAP53Q9BUR4 548 aaKnown RBP8.64□□□□□ -1.03
LRCH3-219ENST00000494069 OSBPL1AQ9BXW6 950 aa8.64□□□□□ -1.03
LRCH3-219ENST00000494069 EDEM3Q9BZQ6 932 aa8.64□□□□□ -1.03
LRCH3-219ENST00000494069 THAP2Q9H0W7 228 aa8.64□□□□□ -1.03
LRCH3-219ENST00000494069 TCEAL2Q9H3H9 227 aaPredicted RBP8.64□□□□□ -1.03
LRCH3-219ENST00000494069 CCDC86Q9H6F5 360 aaKnown RBP8.64□□□□□ -1.03
LRCH3-219ENST00000494069 MBNL1Q9NR56 388 aaKnown RBP8.64□□□□□ -1.03
LRCH3-219ENST00000494069 GPR27Q9NS67 375 aa8.64□□□□□ -1.03
LRCH3-219ENST00000494069 ETNK2Q9NVF9 386 aa8.64□□□□□ -1.03
LRCH3-219ENST00000494069 DNAJC28Q9NX36 388 aa8.64□□□□□ -1.03
LRCH3-219ENST00000494069 CWC15Q9P013 229 aaKnown RBP8.64□□□□□ -1.03
LRCH3-219ENST00000494069 IFNKQ9P0W0 207 aa8.64□□□□□ -1.03
LRCH3-219ENST00000494069 UBA2Q9UBT2 640 aaPredicted RBP8.64□□□□□ -1.03
LRCH3-219ENST00000494069 PNMA8BQ9ULN7 279 aaPredicted RBP8.64□□□□□ -1.03
LRCH3-219ENST00000494069 COQ6Q9Y2Z9 468 aa8.64□□□□□ -1.03
LRCH3-219ENST00000494069 HS3ST3A1Q9Y663 406 aa8.64□□□□□ -1.03
LRCH3-219ENST00000494069 CELSR3Q9NYQ7 3312 aa8.64□□□□□ -1.03
LRCH3-219ENST00000494069 LAMA5O15230 3695 aa8.64□□□□□ -1.03
LRCH3-219ENST00000494069 A0A087X0T9 212 aa8.63□□□□□ -1.03
LRCH3-219ENST00000494069 LY6G6EA0A0G2JKS1 128 aa8.63□□□□□ -1.03
LRCH3-219ENST00000494069 TTC24A2A3L6 582 aaPredicted RBP8.63□□□□□ -1.03
LRCH3-219ENST00000494069 DFFAO00273 331 aa8.63□□□□□ -1.03
LRCH3-219ENST00000494069 DAPK3O43293 454 aa8.63□□□□□ -1.03
LRCH3-219ENST00000494069 PRPSAP2O60256 369 aa8.63□□□□□ -1.03
LRCH3-219ENST00000494069 RNF8O76064 485 aa8.63□□□□□ -1.03
LRCH3-219ENST00000494069 GYPCP04921 128 aa8.63□□□□□ -1.03
LRCH3-219ENST00000494069 FAM228BP0C875 321 aa8.63□□□□□ -1.03
LRCH3-219ENST00000494069 CKMT2P17540 419 aa8.63□□□□□ -1.03
LRCH3-219ENST00000494069 AMPD1P23109 780 aa8.63□□□□□ -1.03
LRCH3-219ENST00000494069 IGFALSP35858 605 aa8.63□□□□□ -1.03
LRCH3-219ENST00000494069 EIF2B5Q13144 721 aaKnown RBP8.63□□□□□ -1.03
LRCH3-219ENST00000494069 DPYSQ14117 519 aa8.63□□□□□ -1.03
LRCH3-219ENST00000494069 PDE1CQ14123 709 aaPredicted RBP8.63□□□□□ -1.03
LRCH3-219ENST00000494069 ZSCAN23Q3MJ62 389 aa8.63□□□□□ -1.03
LRCH3-219ENST00000494069 TDRD12Q587J7 1177 aaKnown RBP8.63□□□□□ -1.03
LRCH3-219ENST00000494069 PPP1R2P3Q6NXS1 205 aa8.63□□□□□ -1.03
LRCH3-219ENST00000494069 VPS36Q86VN1 386 aa8.63□□□□□ -1.03
LRCH3-219ENST00000494069 GALNT15Q8N3T1 639 aa8.63□□□□□ -1.03
LRCH3-219ENST00000494069 CASKIN2Q8WXE0 1202 aa8.63□□□□□ -1.03
LRCH3-219ENST00000494069 HSPH1Q92598 858 aa8.63□□□□□ -1.03
LRCH3-219ENST00000494069 RAB7BQ96AH8 199 aa8.63□□□□□ -1.03
LRCH3-219ENST00000494069 CENPTQ96BT3 561 aa8.63□□□□□ -1.03
LRCH3-219ENST00000494069 LENG8Q96PV6 779 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms