RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 HNRNPH3P31942 346 aaKnown RBP12.77□□□□□ -0.37
HSPG2-212ENST00000493940 GRK6P43250 576 aa12.77□□□□□ -0.37
HSPG2-212ENST00000493940 NDST2P52849 883 aa12.77□□□□□ -0.37
HSPG2-212ENST00000493940 RHOAP61586 193 aa12.77□□□□□ -0.37
HSPG2-212ENST00000493940 SLC25A11Q02978 314 aaKnown RBP12.77□□□□□ -0.37
HSPG2-212ENST00000493940 MMRN1Q13201 1228 aa12.77□□□□□ -0.37
HSPG2-212ENST00000493940 SUZ12Q15022 739 aaKnown RBP12.77□□□□□ -0.37
HSPG2-212ENST00000493940 NFKBIBQ15653 356 aa12.77□□□□□ -0.37
HSPG2-212ENST00000493940 CCDC122Q5T0U0 273 aa12.77□□□□□ -0.37
HSPG2-212ENST00000493940 PPP1R2P3Q6NXS1 205 aa12.77□□□□□ -0.37
HSPG2-212ENST00000493940 Q6ZSR6 202 aa12.77□□□□□ -0.37
HSPG2-212ENST00000493940 POLNQ7Z5Q5 900 aa12.77□□□□□ -0.37
HSPG2-212ENST00000493940 TTC7BQ86TV6 843 aa12.77□□□□□ -0.37
HSPG2-212ENST00000493940 CAMK1DQ8IU85 385 aa12.77□□□□□ -0.37
HSPG2-212ENST00000493940 ZCCHC14Q8WYQ9 949 aaKnown RBP12.77□□□□□ -0.37
HSPG2-212ENST00000493940 TSC1Q92574 1164 aa12.77□□□□□ -0.37
HSPG2-212ENST00000493940 FEM1CQ96JP0 617 aa12.77□□□□□ -0.37
HSPG2-212ENST00000493940 CHP1Q99653 195 aa12.77□□□□□ -0.37
HSPG2-212ENST00000493940 NUP85Q9BW27 656 aa12.77□□□□□ -0.37
HSPG2-212ENST00000493940 MBNL1Q9NR56 388 aaKnown RBP12.77□□□□□ -0.37
HSPG2-212ENST00000493940 COQ6Q9Y2Z9 468 aa12.77□□□□□ -0.37
HSPG2-212ENST00000493940 ADAMTS20P59510 1910 aa12.76□□□□□ -0.37
HSPG2-212ENST00000493940 ZFC3H1O60293 1989 aaKnown RBP12.76□□□□□ -0.37
HSPG2-212ENST00000493940 URB1O60287 2271 aaKnown RBP12.76□□□□□ -0.37
HSPG2-212ENST00000493940 FAM149AA5PLN7 773 aa12.76□□□□□ -0.37
HSPG2-212ENST00000493940 ZSCAN5CA6NGD5 496 aaPredicted RBP12.76□□□□□ -0.37
HSPG2-212ENST00000493940 TNFSF14O43557 240 aa12.76□□□□□ -0.37
HSPG2-212ENST00000493940 DFNA5O60443 496 aa12.76□□□□□ -0.37
HSPG2-212ENST00000493940 TRIM16O95361 564 aa12.76□□□□□ -0.37
HSPG2-212ENST00000493940 ITGAVP06756 1048 aa12.76□□□□□ -0.37
HSPG2-212ENST00000493940 MYBL1P10243 752 aa12.76□□□□□ -0.37
HSPG2-212ENST00000493940 PCK1P35558 622 aa12.76□□□□□ -0.37
HSPG2-212ENST00000493940 NUDT1P36639 197 aa12.76□□□□□ -0.37
HSPG2-212ENST00000493940 HCAR3P49019 387 aa12.76□□□□□ -0.37
HSPG2-212ENST00000493940 ARSEP51690 589 aa12.76□□□□□ -0.37
HSPG2-212ENST00000493940 GEMIN4P57678 1058 aaKnown RBP12.76□□□□□ -0.37
HSPG2-212ENST00000493940 RPS21P63220 83 aaKnown RBP12.76□□□□□ -0.37
HSPG2-212ENST00000493940 FZD2Q14332 565 aa12.76□□□□□ -0.37
HSPG2-212ENST00000493940 IHHQ14623 411 aa12.76□□□□□ -0.37
HSPG2-212ENST00000493940 ACAP1Q15027 740 aa12.76□□□□□ -0.37
HSPG2-212ENST00000493940 DPYSL2Q16555 572 aa12.76□□□□□ -0.37
HSPG2-212ENST00000493940 CCDC157Q569K6 752 aa12.76□□□□□ -0.37
HSPG2-212ENST00000493940 DHRS13Q6UX07 377 aa12.76□□□□□ -0.37
HSPG2-212ENST00000493940 CCNI2Q6ZMN8 369 aaPredicted RBP12.76□□□□□ -0.37
HSPG2-212ENST00000493940 PGBD5Q8N414 524 aa12.76□□□□□ -0.37
HSPG2-212ENST00000493940 RNF214Q8ND24 703 aa12.76□□□□□ -0.37
HSPG2-212ENST00000493940 HSPH1Q92598 858 aa12.76□□□□□ -0.37
HSPG2-212ENST00000493940 CENPTQ96BT3 561 aa12.76□□□□□ -0.37
HSPG2-212ENST00000493940 PPP1R16AQ96I34 528 aa12.76□□□□□ -0.37
HSPG2-212ENST00000493940 GDAP1L1Q96MZ0 367 aa12.76□□□□□ -0.37
HSPG2-212ENST00000493940 CDC6Q99741 560 aa12.76□□□□□ -0.37
HSPG2-212ENST00000493940 CALN1Q9BXU9 219 aa12.76□□□□□ -0.37
HSPG2-212ENST00000493940 CPEB1Q9BZB8 566 aaKnown RBP12.76□□□□□ -0.37
HSPG2-212ENST00000493940 TCEAL2Q9H3H9 227 aaPredicted RBP12.76□□□□□ -0.37
HSPG2-212ENST00000493940 PCDH18Q9HCL0 1135 aa12.76□□□□□ -0.37
HSPG2-212ENST00000493940 MRPL47Q9HD33 250 aaKnown RBP12.76□□□□□ -0.37
HSPG2-212ENST00000493940 UBA2Q9UBT2 640 aaPredicted RBP12.76□□□□□ -0.37
HSPG2-212ENST00000493940 ANAPC7Q9UJX3 599 aa12.76□□□□□ -0.37
HSPG2-212ENST00000493940 TPX2Q9ULW0 747 aaKnown RBP12.76□□□□□ -0.37
HSPG2-212ENST00000493940 HS3ST3A1Q9Y663 406 aa12.76□□□□□ -0.37
HSPG2-212ENST00000493940 BZW2Q9Y6E2 419 aaKnown RBP12.76□□□□□ -0.37
HSPG2-212ENST00000493940 SCINQ9Y6U3 715 aa12.76□□□□□ -0.37
HSPG2-212ENST00000493940 DFFAO00273 331 aa12.75□□□□□ -0.37
HSPG2-212ENST00000493940 ENC1O14682 589 aa12.75□□□□□ -0.37
HSPG2-212ENST00000493940 LDOC1O95751 146 aaPredicted RBP12.75□□□□□ -0.37
HSPG2-212ENST00000493940 IGSF6O95976 241 aa12.75□□□□□ -0.37
HSPG2-212ENST00000493940 DGKAP23743 735 aa12.75□□□□□ -0.37
HSPG2-212ENST00000493940 AKT2P31751 481 aa12.75□□□□□ -0.37
HSPG2-212ENST00000493940 HTR7P34969 479 aa12.75□□□□□ -0.37
HSPG2-212ENST00000493940 IGFALSP35858 605 aa12.75□□□□□ -0.37
HSPG2-212ENST00000493940 TAS2R40P59535 323 aa12.75□□□□□ -0.37
HSPG2-212ENST00000493940 TPM4P67936 248 aa12.75□□□□□ -0.37
HSPG2-212ENST00000493940 SLC10A7Q0GE19 358 aa12.75□□□□□ -0.37
HSPG2-212ENST00000493940 OVGP1Q12889 678 aa12.75□□□□□ -0.37
HSPG2-212ENST00000493940 CAMK2BQ13554 666 aa12.75□□□□□ -0.37
HSPG2-212ENST00000493940 PTPRRQ15256 657 aa12.75□□□□□ -0.37
HSPG2-212ENST00000493940 KIAA1161Q6NSJ0 714 aa12.75□□□□□ -0.37
HSPG2-212ENST00000493940 TMPRSS7Q7RTY8 843 aa12.75□□□□□ -0.37
HSPG2-212ENST00000493940 SRLQ86TD4 932 aa12.75□□□□□ -0.37
HSPG2-212ENST00000493940 PSTKQ8IV42 348 aaKnown RBP12.75□□□□□ -0.37
HSPG2-212ENST00000493940 NIPA2Q8N8Q9 360 aa12.75□□□□□ -0.37
HSPG2-212ENST00000493940 UNC13CQ8NB66 2214 aa12.75□□□□□ -0.37
HSPG2-212ENST00000493940 LRRN4Q8WUT4 740 aa12.75□□□□□ -0.37
HSPG2-212ENST00000493940 CASKIN2Q8WXE0 1202 aa12.75□□□□□ -0.37
HSPG2-212ENST00000493940 SKA1Q96BD8 255 aa12.75□□□□□ -0.37
HSPG2-212ENST00000493940 LRIG1Q96JA1 1093 aa12.75□□□□□ -0.37
HSPG2-212ENST00000493940 CNDP2Q96KP4 475 aaKnown RBP12.75□□□□□ -0.37
HSPG2-212ENST00000493940 LENG8Q96PV6 779 aaPredicted RBP12.75□□□□□ -0.37
HSPG2-212ENST00000493940 CSPG4P5Q96PW8 444 aa12.75□□□□□ -0.37
HSPG2-212ENST00000493940 WRAP53Q9BUR4 548 aaKnown RBP12.75□□□□□ -0.37
HSPG2-212ENST00000493940 SUV39H2Q9H5I1 410 aa12.75□□□□□ -0.37
HSPG2-212ENST00000493940 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.75□□□□□ -0.37
HSPG2-212ENST00000493940 KLHL11Q9NVR0 708 aa12.75□□□□□ -0.37
HSPG2-212ENST00000493940 APOBEC2Q9Y235 224 aaKnown RBP12.75□□□□□ -0.37
HSPG2-212ENST00000493940 ITPR1Q14643 2758 aa12.75□□□□□ -0.37
HSPG2-212ENST00000493940 LY6G6EA0A0G2JKS1 128 aa12.74□□□□□ -0.37
HSPG2-212ENST00000493940 TSPAN11A1L157 253 aa12.74□□□□□ -0.37
HSPG2-212ENST00000493940 CASC3O15234 703 aaKnown RBP12.74□□□□□ -0.37
HSPG2-212ENST00000493940 DAPK3O43293 454 aa12.74□□□□□ -0.37
HSPG2-212ENST00000493940 TSPAN6O43657 245 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms