RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 ZCCHC10Q8TBK6 192 aa4.46□□□□□ -1.7
ITGB1-216ENST00000493758 NOC3LQ8WTT2 800 aaKnown RBP4.46□□□□□ -1.7
ITGB1-216ENST00000493758 YME1L1Q96TA2 773 aa4.46□□□□□ -1.7
ITGB1-216ENST00000493758 SLC25A33Q9BSK2 321 aa4.46□□□□□ -1.7
ITGB1-216ENST00000493758 MMTAG2Q9BU76 263 aaKnown RBP4.46□□□□□ -1.7
ITGB1-216ENST00000493758 GPR63Q9BZJ6 419 aa4.46□□□□□ -1.7
ITGB1-216ENST00000493758 TM6SF1Q9BZW5 370 aa4.46□□□□□ -1.7
ITGB1-216ENST00000493758 TMEM51Q9NW97 253 aa4.46□□□□□ -1.7
ITGB1-216ENST00000493758 PPP1R14DQ9NXH3 145 aa4.46□□□□□ -1.7
ITGB1-216ENST00000493758 PDP2Q9P2J9 529 aa4.46□□□□□ -1.7
ITGB1-216ENST00000493758 CNOT7Q9UIV1 285 aaKnown RBP4.46□□□□□ -1.7
ITGB1-216ENST00000493758 HSF4Q9ULV5 492 aa4.46□□□□□ -1.7
ITGB1-216ENST00000493758 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.46□□□□□ -1.7
ITGB1-216ENST00000493758 PCDHGB5Q9Y5G0 923 aa4.46□□□□□ -1.7
ITGB1-216ENST00000493758 ITM2AO43736 263 aa4.45□□□□□ -1.7
ITGB1-216ENST00000493758 KCNJ13O60928 360 aa4.45□□□□□ -1.7
ITGB1-216ENST00000493758 GAGE7O76087 117 aa4.45□□□□□ -1.7
ITGB1-216ENST00000493758 PPP1R3DO95685 299 aa4.45□□□□□ -1.7
ITGB1-216ENST00000493758 GAGE12FP0CL80 117 aa4.45□□□□□ -1.7
ITGB1-216ENST00000493758 GAGE12GP0CL81 117 aa4.45□□□□□ -1.7
ITGB1-216ENST00000493758 GAGE12IP0CL82 117 aa4.45□□□□□ -1.7
ITGB1-216ENST00000493758 PCNAP12004 261 aa4.45□□□□□ -1.7
ITGB1-216ENST00000493758 ITGAXP20702 1163 aa4.45□□□□□ -1.7
ITGB1-216ENST00000493758 FMO4P31512 558 aa4.45□□□□□ -1.7
ITGB1-216ENST00000493758 CXCR3P49682 368 aa4.45□□□□□ -1.7
ITGB1-216ENST00000493758 ART1P52961 327 aa4.45□□□□□ -1.7
ITGB1-216ENST00000493758 NR1H2P55055 460 aa4.45□□□□□ -1.7
ITGB1-216ENST00000493758 BNC1Q01954 994 aa4.45□□□□□ -1.7
ITGB1-216ENST00000493758 CYP4A11Q02928 519 aa4.45□□□□□ -1.7
ITGB1-216ENST00000493758 GAGE1Q13065 139 aa4.45□□□□□ -1.7
ITGB1-216ENST00000493758 GAGE4Q13068 117 aa4.45□□□□□ -1.7
ITGB1-216ENST00000493758 PRICKLE4Q2TBC4 344 aa4.45□□□□□ -1.7
ITGB1-216ENST00000493758 EDRF1Q3B7T1 1238 aa4.45□□□□□ -1.7
ITGB1-216ENST00000493758 ZNF585BQ52M93 769 aa4.45□□□□□ -1.7
ITGB1-216ENST00000493758 PPP6R3Q5H9R7 873 aaPredicted RBP4.45□□□□□ -1.7
ITGB1-216ENST00000493758 ZNF667Q5HYK9 610 aa4.45□□□□□ -1.7
ITGB1-216ENST00000493758 SERTAD4-AS1Q5TG53 156 aa4.45□□□□□ -1.7
ITGB1-216ENST00000493758 NADSYN1Q6IA69 706 aa4.45□□□□□ -1.7
ITGB1-216ENST00000493758 KLHL24Q6TFL4 600 aa4.45□□□□□ -1.7
ITGB1-216ENST00000493758 TBC1D26Q86UD7 250 aa4.45□□□□□ -1.7
ITGB1-216ENST00000493758 FAM160B2Q86V87 743 aa4.45□□□□□ -1.7
ITGB1-216ENST00000493758 TMTC1Q8IUR5 882 aa4.45□□□□□ -1.7
ITGB1-216ENST00000493758 MIGA1Q8NAN2 632 aa4.45□□□□□ -1.7
ITGB1-216ENST00000493758 STAMQ92783 540 aa4.45□□□□□ -1.7
ITGB1-216ENST00000493758 INTS2Q9H0H0 1204 aaKnown RBP4.45□□□□□ -1.7
ITGB1-216ENST00000493758 WWOXQ9NZC7 414 aa4.45□□□□□ -1.7
ITGB1-216ENST00000493758 TBX20Q9UMR3 447 aa4.45□□□□□ -1.7
ITGB1-216ENST00000493758 A0A1B0GVM2 712 aa4.44□□□□□ -1.7
ITGB1-216ENST00000493758 DYTNA2CJ06 578 aa4.44□□□□□ -1.7
ITGB1-216ENST00000493758 CPED1A4D0V7 1026 aa4.44□□□□□ -1.7
ITGB1-216ENST00000493758 HSPB2A8KAH6 182 aa4.44□□□□□ -1.7
ITGB1-216ENST00000493758 KDM4EB2RXH2 506 aaPredicted RBP4.44□□□□□ -1.7
ITGB1-216ENST00000493758 TIMM23O14925 209 aa4.44□□□□□ -1.7
ITGB1-216ENST00000493758 HEXAP06865 529 aa4.44□□□□□ -1.7
ITGB1-216ENST00000493758 TGFB3P10600 412 aa4.44□□□□□ -1.7
ITGB1-216ENST00000493758 ZNF12P17014 697 aa4.44□□□□□ -1.7
ITGB1-216ENST00000493758 GPTP24298 496 aa4.44□□□□□ -1.7
ITGB1-216ENST00000493758 C21orf33P30042 268 aaPredicted RBP4.44□□□□□ -1.7
ITGB1-216ENST00000493758 PGM1P36871 562 aa4.44□□□□□ -1.7
ITGB1-216ENST00000493758 TRAF3Q13114 568 aa4.44□□□□□ -1.7
ITGB1-216ENST00000493758 TRPC3Q13507 836 aa4.44□□□□□ -1.7
ITGB1-216ENST00000493758 HSPB2Q16082 182 aa4.44□□□□□ -1.7
ITGB1-216ENST00000493758 BAK1Q16611 211 aa4.44□□□□□ -1.7
ITGB1-216ENST00000493758 FAM69BQ5VUD6 431 aa4.44□□□□□ -1.7
ITGB1-216ENST00000493758 MB21D2Q8IYB1 491 aaPredicted RBP4.44□□□□□ -1.7
ITGB1-216ENST00000493758 CCDC105Q8IYK2 499 aa4.44□□□□□ -1.7
ITGB1-216ENST00000493758 SLCO5A1Q9H2Y9 848 aa4.44□□□□□ -1.7
ITGB1-216ENST00000493758 WASH6PQ9NQA3 447 aa4.44□□□□□ -1.7
ITGB1-216ENST00000493758 KIAA1456Q9P272 454 aa4.44□□□□□ -1.7
ITGB1-216ENST00000493758 SLC13A4Q9UKG4 626 aa4.44□□□□□ -1.7
ITGB1-216ENST00000493758 CARD8Q9Y2G2 431 aa4.44□□□□□ -1.7
ITGB1-216ENST00000493758 CKAP5Q14008 2032 aa4.44□□□□□ -1.7
ITGB1-216ENST00000493758 IGLV5-52A0A0A0MRZ9 124 aa4.43□□□□□ -1.7
ITGB1-216ENST00000493758 NDUFB4O95168 129 aa4.43□□□□□ -1.7
ITGB1-216ENST00000493758 IFIT1P09914 478 aaKnown RBP4.43□□□□□ -1.7
ITGB1-216ENST00000493758 DAOP14920 347 aa4.43□□□□□ -1.7
ITGB1-216ENST00000493758 CD58P19256 250 aa4.43□□□□□ -1.7
ITGB1-216ENST00000493758 EFNB1P98172 346 aa4.43□□□□□ -1.7
ITGB1-216ENST00000493758 PLCB4Q15147 1175 aa4.43□□□□□ -1.7
ITGB1-216ENST00000493758 ESCO2Q56NI9 601 aa4.43□□□□□ -1.7
ITGB1-216ENST00000493758 C9orf57Q5W0N0 161 aa4.43□□□□□ -1.7
ITGB1-216ENST00000493758 CAPRIN2Q6IMN6 1127 aaKnown RBP4.43□□□□□ -1.7
ITGB1-216ENST00000493758 TMEM81Q6P7N7 255 aa4.43□□□□□ -1.7
ITGB1-216ENST00000493758 CREB3L2Q70SY1 520 aa4.43□□□□□ -1.7
ITGB1-216ENST00000493758 PLD5Q8N7P1 536 aa4.43□□□□□ -1.7
ITGB1-216ENST00000493758 NUDCD2Q8WVJ2 157 aa4.43□□□□□ -1.7
ITGB1-216ENST00000493758 RUFY2Q8WXA3 655 aa4.43□□□□□ -1.7
ITGB1-216ENST00000493758 TRIB2Q92519 343 aa4.43□□□□□ -1.7
ITGB1-216ENST00000493758 MAELQ96JY0 434 aaKnown RBP4.43□□□□□ -1.7
ITGB1-216ENST00000493758 LRFN5Q96NI6 719 aa4.43□□□□□ -1.7
ITGB1-216ENST00000493758 PSMD1Q99460 953 aa4.43□□□□□ -1.7
ITGB1-216ENST00000493758 IL25Q9H293 177 aa4.43□□□□□ -1.7
ITGB1-216ENST00000493758 C6orf106Q9H6K1 298 aaPredicted RBP4.43□□□□□ -1.7
ITGB1-216ENST00000493758 SNTG1Q9NSN8 517 aa4.43□□□□□ -1.7
ITGB1-216ENST00000493758 RRN3Q9NYV6 651 aa4.43□□□□□ -1.7
ITGB1-216ENST00000493758 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.43□□□□□ -1.7
ITGB1-216ENST00000493758 A3GALT2U3KPV4 340 aa4.43□□□□□ -1.7
ITGB1-216ENST00000493758 A0A1B0GUV1 79 aa4.42□□□□□ -1.7
ITGB1-216ENST00000493758 KLRF2D3W0D1 207 aa4.42□□□□□ -1.7
ITGB1-216ENST00000493758 PRR23D1E9PI22 279 aaPredicted RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms