RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 FAM72DQ6L9T8 149 aa4.28□□□□□ -1.72
SMC4-223ENST00000493695 MARK2Q7KZI7 788 aaKnown RBP4.28□□□□□ -1.72
SMC4-223ENST00000493695 RAB11FIP2Q7L804 512 aa4.28□□□□□ -1.72
SMC4-223ENST00000493695 FAM72BQ86X60 149 aa4.28□□□□□ -1.72
SMC4-223ENST00000493695 EPHX4Q8IUS5 362 aa4.28□□□□□ -1.72
SMC4-223ENST00000493695 AADATQ8N5Z0 425 aa4.28□□□□□ -1.72
SMC4-223ENST00000493695 ZNF441Q8N8Z8 693 aa4.28□□□□□ -1.72
SMC4-223ENST00000493695 KBTBD3Q8NAB2 608 aa4.28□□□□□ -1.72
SMC4-223ENST00000493695 FAM71BQ8TC56 605 aa4.28□□□□□ -1.72
SMC4-223ENST00000493695 C3orf30Q96M34 536 aa4.28□□□□□ -1.72
SMC4-223ENST00000493695 CSF3RQ99062 836 aa4.28□□□□□ -1.72
SMC4-223ENST00000493695 RTKNQ9BST9 563 aa4.28□□□□□ -1.72
SMC4-223ENST00000493695 C1QTNF5Q9BXJ0 243 aa4.28□□□□□ -1.72
SMC4-223ENST00000493695 CXorf56Q9H5V9 222 aa4.28□□□□□ -1.72
SMC4-223ENST00000493695 MVB12BQ9H7P6 319 aa4.28□□□□□ -1.72
SMC4-223ENST00000493695 RCE1Q9Y256 329 aa4.28□□□□□ -1.72
SMC4-223ENST00000493695 ADAM18Q9Y3Q7 739 aa4.28□□□□□ -1.72
SMC4-223ENST00000493695 GREB1LQ9C091 1923 aaPredicted RBP4.28□□□□□ -1.72
SMC4-223ENST00000493695 IGKV3D-15A0A087WSY6 115 aa4.27□□□□□ -1.73
SMC4-223ENST00000493695 LGALS16A8MUM7 142 aa4.27□□□□□ -1.73
SMC4-223ENST00000493695 C16orf97H3BN30 126 aa4.27□□□□□ -1.73
SMC4-223ENST00000493695 SKAP2O75563 359 aaPredicted RBP4.27□□□□□ -1.73
SMC4-223ENST00000493695 CLDN14O95500 239 aa4.27□□□□□ -1.73
SMC4-223ENST00000493695 CSTBP04080 98 aaKnown RBP4.27□□□□□ -1.73
SMC4-223ENST00000493695 TFPIP10646 304 aa4.27□□□□□ -1.73
SMC4-223ENST00000493695 VEGFAP15692 232 aaPredicted RBP4.27□□□□□ -1.73
SMC4-223ENST00000493695 SERPINA4P29622 427 aa4.27□□□□□ -1.73
SMC4-223ENST00000493695 DCTDP32321 178 aa4.27□□□□□ -1.73
SMC4-223ENST00000493695 SERPINF1P36955 418 aa4.27□□□□□ -1.73
SMC4-223ENST00000493695 HDAC4P56524 1084 aa4.27□□□□□ -1.73
SMC4-223ENST00000493695 ZBTB17Q13105 803 aa4.27□□□□□ -1.73
SMC4-223ENST00000493695 PDCLQ13371 301 aa4.27□□□□□ -1.73
SMC4-223ENST00000493695 TANGO2Q6ICL3 276 aa4.27□□□□□ -1.73
SMC4-223ENST00000493695 CCDC117Q8IWD4 279 aaPredicted RBP4.27□□□□□ -1.73
SMC4-223ENST00000493695 RSC1A1Q92681 617 aa4.27□□□□□ -1.73
SMC4-223ENST00000493695 TAF15Q92804 592 aaKnown RBP eCLIP4.27□□□□□ -1.73
SMC4-223ENST00000493695 KATNAL1Q9BW62 490 aa4.27□□□□□ -1.73
SMC4-223ENST00000493695 ZNF334Q9HCZ1 680 aaPredicted RBP4.27□□□□□ -1.73
SMC4-223ENST00000493695 WDR6Q9NNW5 1121 aaKnown RBP4.27□□□□□ -1.73
SMC4-223ENST00000493695 DDX43Q9NXZ2 648 aaKnown RBP4.27□□□□□ -1.73
SMC4-223ENST00000493695 SMARCAL1Q9NZC9 954 aa4.27□□□□□ -1.73
SMC4-223ENST00000493695 GRHL1Q9NZI5 618 aa4.27□□□□□ -1.73
SMC4-223ENST00000493695 DAPP1Q9UN19 280 aa4.27□□□□□ -1.73
SMC4-223ENST00000493695 TCF19Q9Y242 345 aa4.27□□□□□ -1.73
SMC4-223ENST00000493695 A0A0G2JPF8 293 aa4.26□□□□□ -1.73
SMC4-223ENST00000493695 OR6C68A6NDL8 312 aa4.26□□□□□ -1.73
SMC4-223ENST00000493695 HNRNPCL3B7ZW38 293 aa4.26□□□□□ -1.73
SMC4-223ENST00000493695 J3KR12 359 aa4.26□□□□□ -1.73
SMC4-223ENST00000493695 EDIL3O43854 480 aa4.26□□□□□ -1.73
SMC4-223ENST00000493695 HNRNPCL1O60812 293 aaKnown RBP4.26□□□□□ -1.73
SMC4-223ENST00000493695 ITGA2BP08514 1039 aa4.26□□□□□ -1.73
SMC4-223ENST00000493695 HNRNPCL4P0DMR1 293 aa4.26□□□□□ -1.73
SMC4-223ENST00000493695 MYF6P23409 242 aa4.26□□□□□ -1.73
SMC4-223ENST00000493695 AVPR2P30518 371 aa4.26□□□□□ -1.73
SMC4-223ENST00000493695 IL15P40933 162 aaPredicted RBP4.26□□□□□ -1.73
SMC4-223ENST00000493695 TNFAIP1Q13829 316 aa4.26□□□□□ -1.73
SMC4-223ENST00000493695 BLMHQ13867 455 aa4.26□□□□□ -1.73
SMC4-223ENST00000493695 LPIN1Q14693 890 aa4.26□□□□□ -1.73
SMC4-223ENST00000493695 AP5B1Q2VPB7 878 aa4.26□□□□□ -1.73
SMC4-223ENST00000493695 TRIM60Q495X7 471 aa4.26□□□□□ -1.73
SMC4-223ENST00000493695 SETMARQ53H47 684 aaPredicted RBP4.26□□□□□ -1.73
SMC4-223ENST00000493695 IRAK1BP1Q5VVH5 260 aa4.26□□□□□ -1.73
SMC4-223ENST00000493695 TBC1D9BQ66K14 1250 aa4.26□□□□□ -1.73
SMC4-223ENST00000493695 DGLUCYQ7Z3D6 616 aa4.26□□□□□ -1.73
SMC4-223ENST00000493695 SLC9B2Q86UD5 537 aa4.26□□□□□ -1.73
SMC4-223ENST00000493695 KCNH5Q8NCM2 988 aa4.26□□□□□ -1.73
SMC4-223ENST00000493695 OR1N1Q8NGS0 311 aa4.26□□□□□ -1.73
SMC4-223ENST00000493695 SLC2A12Q8TD20 617 aa4.26□□□□□ -1.73
SMC4-223ENST00000493695 LRFN5Q96NI6 719 aa4.26□□□□□ -1.73
SMC4-223ENST00000493695 RMDN3Q96TC7 470 aa4.26□□□□□ -1.73
SMC4-223ENST00000493695 MMTAG2Q9BU76 263 aaKnown RBP4.26□□□□□ -1.73
SMC4-223ENST00000493695 OBP2BQ9NPH6 170 aa4.26□□□□□ -1.73
SMC4-223ENST00000493695 SLC22A11Q9NSA0 550 aa4.26□□□□□ -1.73
SMC4-223ENST00000493695 ZFP57Q9NU63 452 aa4.26□□□□□ -1.73
SMC4-223ENST00000493695 KCNS2Q9ULS6 477 aa4.26□□□□□ -1.73
SMC4-223ENST00000493695 C19orf53Q9UNZ5 99 aaPredicted RBP4.26□□□□□ -1.73
SMC4-223ENST00000493695 TP53BP1Q12888 1972 aaPredicted RBP4.25□□□□□ -1.73
SMC4-223ENST00000493695 FAM157AC9JC47 383 aa4.25□□□□□ -1.73
SMC4-223ENST00000493695 ACTL6BO94805 426 aa4.25□□□□□ -1.73
SMC4-223ENST00000493695 ZNF883P0CG24 379 aa4.25□□□□□ -1.73
SMC4-223ENST00000493695 GRK6P43250 576 aa4.25□□□□□ -1.73
SMC4-223ENST00000493695 FAM27E3Q08E93 113 aa4.25□□□□□ -1.73
SMC4-223ENST00000493695 DHX8Q14562 1220 aaKnown RBP4.25□□□□□ -1.73
SMC4-223ENST00000493695 LIN54Q6MZP7 749 aa4.25□□□□□ -1.73
SMC4-223ENST00000493695 KLHL17Q6TDP4 642 aa4.25□□□□□ -1.73
SMC4-223ENST00000493695 MYPOPQ86VE0 399 aaPredicted RBP4.25□□□□□ -1.73
SMC4-223ENST00000493695 FSIP1Q8NA03 581 aa4.25□□□□□ -1.73
SMC4-223ENST00000493695 FIG4Q92562 907 aa4.25□□□□□ -1.73
SMC4-223ENST00000493695 PSMD1Q99460 953 aa4.25□□□□□ -1.73
SMC4-223ENST00000493695 MOV10L1Q9BXT6 1211 aaKnown RBP4.25□□□□□ -1.73
SMC4-223ENST00000493695 GFRA4Q9GZZ7 299 aa4.25□□□□□ -1.73
SMC4-223ENST00000493695 THAP1Q9NVV9 213 aa4.25□□□□□ -1.73
SMC4-223ENST00000493695 NDUFAF4Q9P032 175 aa4.25□□□□□ -1.73
SMC4-223ENST00000493695 SNED1Q8TER0 1413 aa4.24□□□□□ -1.73
SMC4-223ENST00000493695 ACKR2O00590 384 aa4.24□□□□□ -1.73
SMC4-223ENST00000493695 PIP5K1CO60331 668 aa4.24□□□□□ -1.73
SMC4-223ENST00000493695 TIPRLO75663 272 aa4.24□□□□□ -1.73
SMC4-223ENST00000493695 AMBPP02760 352 aa4.24□□□□□ -1.73
SMC4-223ENST00000493695 RNF224P0DH78 156 aa4.24□□□□□ -1.73
SMC4-223ENST00000493695 CHN1P15882 459 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms