RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 POF1BQ8WVV4 589 aa7.11□□□□□ -1.27
HERC4-211ENST00000492996 SLC7A6OSQ96CW6 309 aaPredicted RBP7.11□□□□□ -1.27
HERC4-211ENST00000492996 ARPC5LQ9BPX5 153 aa7.11□□□□□ -1.27
HERC4-211ENST00000492996 TBC1D10AQ9BXI6 508 aa7.11□□□□□ -1.27
HERC4-211ENST00000492996 C8orf33Q9H7E9 229 aaPredicted RBP7.11□□□□□ -1.27
HERC4-211ENST00000492996 KCNK13Q9HB14 408 aa7.11□□□□□ -1.27
HERC4-211ENST00000492996 TBC1D13Q9NVG8 400 aa7.11□□□□□ -1.27
HERC4-211ENST00000492996 ABI2Q9NYB9 513 aaPredicted RBP7.11□□□□□ -1.27
HERC4-211ENST00000492996 BFARQ9NZS9 450 aa7.11□□□□□ -1.27
HERC4-211ENST00000492996 EVLQ9UI08 416 aaPredicted RBP7.11□□□□□ -1.27
HERC4-211ENST00000492996 DSEQ9UL01 958 aa7.11□□□□□ -1.27
HERC4-211ENST00000492996 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.11□□□□□ -1.27
HERC4-211ENST00000492996 ARHGAP42A6NI28 874 aa7.11□□□□□ -1.27
HERC4-211ENST00000492996 H7C4K7 107 aa7.11□□□□□ -1.27
HERC4-211ENST00000492996 POLBP06746 335 aa7.11□□□□□ -1.27
HERC4-211ENST00000492996 HNRNPCP07910 306 aaKnown RBP eCLIP7.11□□□□□ -1.276e-9■■■■■ 29.6
HERC4-211ENST00000492996 ITGA2BP08514 1039 aa7.11□□□□□ -1.27
HERC4-211ENST00000492996 DLDP09622 509 aaKnown RBP7.11□□□□□ -1.27
HERC4-211ENST00000492996 PGAM1P18669 254 aa7.11□□□□□ -1.27
HERC4-211ENST00000492996 CD68P34810 354 aaPredicted RBP7.11□□□□□ -1.27
HERC4-211ENST00000492996 CDK16Q00536 496 aa7.11□□□□□ -1.27
HERC4-211ENST00000492996 PDE1CQ14123 709 aaPredicted RBP7.11□□□□□ -1.27
HERC4-211ENST00000492996 DLG2Q15700 870 aa7.11□□□□□ -1.27
HERC4-211ENST00000492996 INTS6LQ5JSJ4 861 aaKnown RBP7.11□□□□□ -1.27
HERC4-211ENST00000492996 RAB41Q5JT25 222 aa7.11□□□□□ -1.27
HERC4-211ENST00000492996 BNIPLQ7Z465 357 aa7.11□□□□□ -1.27
HERC4-211ENST00000492996 CERS2Q96G23 380 aa7.11□□□□□ -1.27
HERC4-211ENST00000492996 ZNF778Q96MU6 729 aa7.11□□□□□ -1.27
HERC4-211ENST00000492996 ATXN3LQ9H3M9 355 aa7.11□□□□□ -1.27
HERC4-211ENST00000492996 CAB39LQ9H9S4 337 aa7.11□□□□□ -1.27
HERC4-211ENST00000492996 DMAP1Q9NPF5 467 aaPredicted RBP7.11□□□□□ -1.27
HERC4-211ENST00000492996 ACSS2Q9NR19 701 aa7.11□□□□□ -1.27
HERC4-211ENST00000492996 CHRAC1Q9NRG0 131 aa7.11□□□□□ -1.27
HERC4-211ENST00000492996 PPARGC1AQ9UBK2 798 aaKnown RBP7.11□□□□□ -1.27
HERC4-211ENST00000492996 SUN2Q9UH99 717 aa7.11□□□□□ -1.27
HERC4-211ENST00000492996 VANGL2Q9ULK5 521 aa7.11□□□□□ -1.27
HERC4-211ENST00000492996 DYTNA2CJ06 578 aa7.11□□□□□ -1.27
HERC4-211ENST00000492996 H0Y3Z8 333 aa7.11□□□□□ -1.27
HERC4-211ENST00000492996 SUPT3HO75486 399 aa7.11□□□□□ -1.27
HERC4-211ENST00000492996 MYOGP15173 224 aa7.11□□□□□ -1.27
HERC4-211ENST00000492996 SERPINB9P50453 376 aa7.11□□□□□ -1.27
HERC4-211ENST00000492996 ARPP19P56211 112 aa7.11□□□□□ -1.27
HERC4-211ENST00000492996 SESN3P58005 492 aa7.11□□□□□ -1.27
HERC4-211ENST00000492996 SEMA3BQ13214 749 aa7.11□□□□□ -1.27
HERC4-211ENST00000492996 STX3Q13277 289 aa7.11□□□□□ -1.27
HERC4-211ENST00000492996 RCN2Q14257 317 aa7.11□□□□□ -1.27
HERC4-211ENST00000492996 FASTKD1Q53R41 847 aaKnown RBP7.11□□□□□ -1.27
HERC4-211ENST00000492996 BTBD8Q5XKL5 378 aa7.11□□□□□ -1.27
HERC4-211ENST00000492996 TMEM154Q6P9G4 183 aa7.11□□□□□ -1.27
HERC4-211ENST00000492996 NANOGNBQ7Z5D8 188 aa7.11□□□□□ -1.27
HERC4-211ENST00000492996 MAML2Q8IZL2 1156 aaPredicted RBP7.11□□□□□ -1.27
HERC4-211ENST00000492996 NTAN1Q96AB6 310 aa7.11□□□□□ -1.27
HERC4-211ENST00000492996 MTBPQ96DY7 904 aa7.11□□□□□ -1.27
HERC4-211ENST00000492996 RILPQ96NA2 401 aa7.11□□□□□ -1.27
HERC4-211ENST00000492996 MLPHQ9BV36 600 aaPredicted RBP7.11□□□□□ -1.27
HERC4-211ENST00000492996 NMUR2Q9GZQ4 415 aa7.11□□□□□ -1.27
HERC4-211ENST00000492996 EBF1Q9UH73 591 aa7.11□□□□□ -1.27
HERC4-211ENST00000492996 FCHO1O14526 889 aa7.1□□□□□ -1.27
HERC4-211ENST00000492996 MT-CYBP00156 380 aaPredicted RBP7.1□□□□□ -1.27
HERC4-211ENST00000492996 F9P00740 461 aa7.1□□□□□ -1.27
HERC4-211ENST00000492996 CAPNS1P04632 268 aa7.1□□□□□ -1.27
HERC4-211ENST00000492996 BPGMP07738 259 aa7.1□□□□□ -1.27
HERC4-211ENST00000492996 GSTA2P09210 222 aa7.1□□□□□ -1.27
HERC4-211ENST00000492996 MLNP12872 115 aa7.1□□□□□ -1.27
HERC4-211ENST00000492996 CTNNB1P35222 781 aa7.1□□□□□ -1.27
HERC4-211ENST00000492996 GARSP41250 739 aaKnown RBP7.1□□□□□ -1.27
HERC4-211ENST00000492996 CXCR3P49682 368 aa7.1□□□□□ -1.27
HERC4-211ENST00000492996 AQP5P55064 265 aa7.1□□□□□ -1.27
HERC4-211ENST00000492996 TSPY1Q01534 308 aa7.1□□□□□ -1.27
HERC4-211ENST00000492996 PFKPQ01813 784 aa7.1□□□□□ -1.27
HERC4-211ENST00000492996 ENPP2Q13822 863 aa7.1□□□□□ -1.27
HERC4-211ENST00000492996 SLC39A12Q504Y0 691 aa7.1□□□□□ -1.27
HERC4-211ENST00000492996 PLA2G2CQ5R387 149 aa7.1□□□□□ -1.27
HERC4-211ENST00000492996 BEND5Q7L4P6 421 aa7.1□□□□□ -1.27
HERC4-211ENST00000492996 OTOP2Q7RTS6 562 aa7.1□□□□□ -1.27
HERC4-211ENST00000492996 STRA8Q7Z7C7 330 aa7.1□□□□□ -1.27
HERC4-211ENST00000492996 TMC8Q8IU68 726 aa7.1□□□□□ -1.27
HERC4-211ENST00000492996 SPATA2LQ8IUW3 424 aaPredicted RBP7.1□□□□□ -1.27
HERC4-211ENST00000492996 SPNS2Q8IVW8 549 aa7.1□□□□□ -1.27
HERC4-211ENST00000492996 SNRNP27Q8WVK2 155 aaKnown RBP7.1□□□□□ -1.27
HERC4-211ENST00000492996 B3GALT6Q96L58 329 aa7.1□□□□□ -1.27
HERC4-211ENST00000492996 ACBD6Q9BR61 282 aa7.1□□□□□ -1.27
HERC4-211ENST00000492996 VCXQ9H320 206 aa7.1□□□□□ -1.27
HERC4-211ENST00000492996 NDFIP2Q9NV92 336 aa7.1□□□□□ -1.27
HERC4-211ENST00000492996 MPP6Q9NZW5 540 aa7.1□□□□□ -1.27
HERC4-211ENST00000492996 TP53BP1Q12888 1972 aaPredicted RBP7.1□□□□□ -1.27
HERC4-211ENST00000492996 MAN2B1O00754 1011 aa7.1□□□□□ -1.27
HERC4-211ENST00000492996 ITM2AO43736 263 aa7.1□□□□□ -1.27
HERC4-211ENST00000492996 AP2A1O95782 977 aa7.1□□□□□ -1.27
HERC4-211ENST00000492996 CRHR1P34998 444 aa7.1□□□□□ -1.27
HERC4-211ENST00000492996 CCNFP41002 786 aa7.1□□□□□ -1.27
HERC4-211ENST00000492996 OR1G1P47890 313 aa7.1□□□□□ -1.27
HERC4-211ENST00000492996 GPR15P49685 360 aa7.1□□□□□ -1.27
HERC4-211ENST00000492996 SLC5A3P53794 718 aa7.1□□□□□ -1.27
HERC4-211ENST00000492996 YWHAHQ04917 246 aaPredicted RBP7.1□□□□□ -1.27
HERC4-211ENST00000492996 PPIDQ08752 370 aaKnown RBP7.1□□□□□ -1.27
HERC4-211ENST00000492996 NIPAL4Q0D2K0 466 aa7.1□□□□□ -1.27
HERC4-211ENST00000492996 DDR2Q16832 855 aa7.1□□□□□ -1.27
HERC4-211ENST00000492996 TEX44Q53QW1 395 aa7.1□□□□□ -1.27
HERC4-211ENST00000492996 ATG16L1Q676U5 607 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms