RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 ATXN2LQ8WWM7 1075 aaKnown RBP14.24□□□□□ -0.13
PDZRN3-210ENST00000492909 EBNA1BP2Q99848 306 aaKnown RBP14.24□□□□□ -0.13
PDZRN3-210ENST00000492909 VPS37BQ9H9H4 285 aa14.24□□□□□ -0.13
PDZRN3-210ENST00000492909 NOD2Q9HC29 1040 aa14.24□□□□□ -0.13
PDZRN3-210ENST00000492909 SAMD15Q9P1V8 674 aa14.24□□□□□ -0.13
PDZRN3-210ENST00000492909 DEC1Q9P2X7 70 aa14.24□□□□□ -0.13
PDZRN3-210ENST00000492909 ZC3H7BQ9UGR2 993 aaKnown RBP14.24□□□□□ -0.13
PDZRN3-210ENST00000492909 NUMBLQ9Y6R0 609 aa14.24□□□□□ -0.13
PDZRN3-210ENST00000492909 COL4A3Q01955 1670 aa14.24□□□□□ -0.13
PDZRN3-210ENST00000492909 SRCP12931 536 aa14.24□□□□□ -0.13
PDZRN3-210ENST00000492909 BMP1P13497 986 aa14.24□□□□□ -0.13
PDZRN3-210ENST00000492909 TSHRP16473 764 aa14.24□□□□□ -0.13
PDZRN3-210ENST00000492909 PHBP35232 272 aa14.24□□□□□ -0.13
PDZRN3-210ENST00000492909 NPY2RP49146 381 aa14.24□□□□□ -0.13
PDZRN3-210ENST00000492909 STK19P49842 368 aaPredicted RBP14.24□□□□□ -0.13
PDZRN3-210ENST00000492909 IFFO1Q0D2I5 559 aa14.24□□□□□ -0.13
PDZRN3-210ENST00000492909 HTR4Q13639 388 aa14.24□□□□□ -0.13
PDZRN3-210ENST00000492909 GEN1Q17RS7 908 aa14.24□□□□□ -0.13
PDZRN3-210ENST00000492909 AAK1Q2M2I8 961 aa14.24□□□□□ -0.13
PDZRN3-210ENST00000492909 GAB4Q2WGN9 574 aa14.24□□□□□ -0.13
PDZRN3-210ENST00000492909 RALGPS1Q5JS13 557 aa14.24□□□□□ -0.13
PDZRN3-210ENST00000492909 CAPN12Q6ZSI9 719 aa14.24□□□□□ -0.13
PDZRN3-210ENST00000492909 KDELC2Q7Z4H8 507 aa14.24□□□□□ -0.13
PDZRN3-210ENST00000492909 RNF135Q8IUD6 432 aa14.24□□□□□ -0.13
PDZRN3-210ENST00000492909 ZNF473Q8WTR7 871 aaKnown RBP14.24□□□□□ -0.13
PDZRN3-210ENST00000492909 TTC17Q96AE7 1141 aa14.24□□□□□ -0.13
PDZRN3-210ENST00000492909 STAMBPL1Q96FJ0 436 aa14.24□□□□□ -0.13
PDZRN3-210ENST00000492909 NAT9Q9BTE0 207 aa14.24□□□□□ -0.13
PDZRN3-210ENST00000492909 RPP25Q9BUL9 199 aaKnown RBP14.24□□□□□ -0.13
PDZRN3-210ENST00000492909 IL22Q9GZX6 179 aa14.24□□□□□ -0.13
PDZRN3-210ENST00000492909 CENPHQ9H3R5 247 aa14.24□□□□□ -0.13
PDZRN3-210ENST00000492909 ARNT2Q9HBZ2 717 aa14.24□□□□□ -0.13
PDZRN3-210ENST00000492909 GTSE1Q9NYZ3 720 aa14.24□□□□□ -0.13
PDZRN3-210ENST00000492909 ANKRD65E5RJM6 399 aa14.23□□□□□ -0.13
PDZRN3-210ENST00000492909 ANHXE9PGG2 379 aa14.23□□□□□ -0.13
PDZRN3-210ENST00000492909 SPAG6O75602 509 aa14.23□□□□□ -0.13
PDZRN3-210ENST00000492909 EPOP01588 193 aa14.23□□□□□ -0.13
PDZRN3-210ENST00000492909 SHBGP04278 402 aa14.23□□□□□ -0.13
PDZRN3-210ENST00000492909 SSTR1P30872 391 aa14.23□□□□□ -0.13
PDZRN3-210ENST00000492909 CRADDP78560 199 aa14.23□□□□□ -0.13
PDZRN3-210ENST00000492909 CDK18Q07002 472 aa14.23□□□□□ -0.13
PDZRN3-210ENST00000492909 TMEM215Q68D42 235 aa14.23□□□□□ -0.13
PDZRN3-210ENST00000492909 GRAMD4Q6IC98 578 aa14.23□□□□□ -0.13
PDZRN3-210ENST00000492909 DENND5AQ6IQ26 1287 aa14.23□□□□□ -0.13
PDZRN3-210ENST00000492909 C3orf62Q6ZUJ4 267 aa14.23□□□□□ -0.13
PDZRN3-210ENST00000492909 CCNJLQ8IV13 435 aa14.23□□□□□ -0.13
PDZRN3-210ENST00000492909 HOMEZQ8IX15 550 aa14.23□□□□□ -0.13
PDZRN3-210ENST00000492909 ISG20Q96AZ6 181 aaKnown RBP14.23□□□□□ -0.13
PDZRN3-210ENST00000492909 IFT43Q96FT9 208 aa14.23□□□□□ -0.13
PDZRN3-210ENST00000492909 FEM1CQ96JP0 617 aa14.23□□□□□ -0.13
PDZRN3-210ENST00000492909 TM6SF2Q9BZW4 377 aa14.23□□□□□ -0.13
PDZRN3-210ENST00000492909 CIPCQ9C0C6 399 aa14.23□□□□□ -0.13
PDZRN3-210ENST00000492909 SYBUQ9NX95 663 aa14.23□□□□□ -0.13
PDZRN3-210ENST00000492909 VCANP13611 3396 aa14.23□□□□□ -0.13
PDZRN3-210ENST00000492909 MYLKQ15746 1914 aa14.23□□□□□ -0.13
PDZRN3-210ENST00000492909 LOC285095A0A1B0GVY8 99 aa14.22□□□□□ -0.13
PDZRN3-210ENST00000492909 IGSF6O95976 241 aa14.22□□□□□ -0.13
PDZRN3-210ENST00000492909 ASLP04424 464 aa14.22□□□□□ -0.13
PDZRN3-210ENST00000492909 ATP5BP06576 529 aaKnown RBP14.22□□□□□ -0.13
PDZRN3-210ENST00000492909 HPDP32754 393 aaPredicted RBP14.22□□□□□ -0.13
PDZRN3-210ENST00000492909 GJA4P35212 333 aa14.22□□□□□ -0.13
PDZRN3-210ENST00000492909 NNMTP40261 264 aa14.22□□□□□ -0.13
PDZRN3-210ENST00000492909 SLC6A11P48066 632 aa14.22□□□□□ -0.13
PDZRN3-210ENST00000492909 GPX6P59796 221 aa14.22□□□□□ -0.13
PDZRN3-210ENST00000492909 AP1S1P61966 158 aa14.22□□□□□ -0.13
PDZRN3-210ENST00000492909 PPP2R2AP63151 447 aa14.22□□□□□ -0.13
PDZRN3-210ENST00000492909 SLC1A5Q15758 541 aa14.22□□□□□ -0.13
PDZRN3-210ENST00000492909 ITPRIPL2Q3MIP1 535 aa14.22□□□□□ -0.13
PDZRN3-210ENST00000492909 PUS10Q3MIT2 529 aaKnown RBP14.22□□□□□ -0.13
PDZRN3-210ENST00000492909 CERCAMQ5T4B2 595 aa14.22□□□□□ -0.13
PDZRN3-210ENST00000492909 ATXN7L2Q5T6C5 722 aaPredicted RBP14.22□□□□□ -0.13
PDZRN3-210ENST00000492909 C22orf39Q6P5X5 142 aa14.22□□□□□ -0.13
PDZRN3-210ENST00000492909 CFAP36Q96G28 342 aa14.22□□□□□ -0.13
PDZRN3-210ENST00000492909 NECAB3Q96P71 396 aaPredicted RBP14.22□□□□□ -0.13
PDZRN3-210ENST00000492909 CCDC77Q9BR77 488 aa14.22□□□□□ -0.13
PDZRN3-210ENST00000492909 CEP44Q9C0F1 390 aa14.22□□□□□ -0.13
PDZRN3-210ENST00000492909 BRD9Q9H8M2 597 aa14.22□□□□□ -0.13
PDZRN3-210ENST00000492909 ERVW-1Q9UQF0 538 aa14.22□□□□□ -0.13
PDZRN3-210ENST00000492909 ARIH1Q9Y4X5 557 aaPredicted RBP14.22□□□□□ -0.13
PDZRN3-210ENST00000492909 TICRRQ7Z2Z1 1910 aa14.22□□□□□ -0.13
PDZRN3-210ENST00000492909 A0A0C4DFX4 3053 aa14.22□□□□□ -0.13
PDZRN3-210ENST00000492909 MAGEB16A2A368 324 aa14.22□□□□□ -0.13
PDZRN3-210ENST00000492909 ATP9BO43861 1147 aa14.22□□□□□ -0.13
PDZRN3-210ENST00000492909 ZNF821O75541 412 aaPredicted RBP14.22□□□□□ -0.13
PDZRN3-210ENST00000492909 SLC34A2O95436 690 aa14.22□□□□□ -0.13
PDZRN3-210ENST00000492909 GSTA2P09210 222 aa14.22□□□□□ -0.13
PDZRN3-210ENST00000492909 TPH1P17752 444 aa14.22□□□□□ -0.13
PDZRN3-210ENST00000492909 PGAM1P18669 254 aa14.22□□□□□ -0.13
PDZRN3-210ENST00000492909 HLA-DPA1P20036 260 aa14.22□□□□□ -0.13
PDZRN3-210ENST00000492909 EIF2DP41214 584 aaKnown RBP14.22□□□□□ -0.13
PDZRN3-210ENST00000492909 CHRNA4P43681 627 aa14.22□□□□□ -0.13
PDZRN3-210ENST00000492909 MAPK8P45983 427 aa14.22□□□□□ -0.13
PDZRN3-210ENST00000492909 CSNK1DP48730 415 aa14.22□□□□□ -0.13
PDZRN3-210ENST00000492909 SNRPD1P62314 119 aaKnown RBP14.22□□□□□ -0.13
PDZRN3-210ENST00000492909 KRT71Q3SY84 523 aa14.22□□□□□ -0.13
PDZRN3-210ENST00000492909 ACCSLQ4AC99 568 aa14.22□□□□□ -0.13
PDZRN3-210ENST00000492909 NCEH1Q6PIU2 408 aa14.22□□□□□ -0.13
PDZRN3-210ENST00000492909 MICALCLQ6ZW33 695 aa14.22□□□□□ -0.13
PDZRN3-210ENST00000492909 SLC25A41Q8N5S1 370 aa14.22□□□□□ -0.13
PDZRN3-210ENST00000492909 OR2AP1Q8NGE2 309 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms