RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 MORC3Q14149 939 aa11.16□□□□□ -0.62
SND1-215ENST00000492772 EXOC3L4Q17RC7 722 aa11.16□□□□□ -0.62
SND1-215ENST00000492772 LINC00303Q3SY05 128 aa11.16□□□□□ -0.62
SND1-215ENST00000492772 FAM102AQ5T9C2 384 aaPredicted RBP11.16□□□□□ -0.62
SND1-215ENST00000492772 B3GNT8Q7Z7M8 397 aa11.16□□□□□ -0.62
SND1-215ENST00000492772 TMEM35BQ8NCS4 154 aa11.16□□□□□ -0.62
SND1-215ENST00000492772 OR2AP1Q8NGE2 309 aa11.16□□□□□ -0.62
SND1-215ENST00000492772 OR6K2Q8NGY2 324 aa11.16□□□□□ -0.62
SND1-215ENST00000492772 PCDH19Q8TAB3 1148 aa11.16□□□□□ -0.62
SND1-215ENST00000492772 CXorf40AQ8TE69 158 aa11.16□□□□□ -0.62
SND1-215ENST00000492772 ARHGEF2Q92974 986 aaKnown RBP11.16□□□□□ -0.62
SND1-215ENST00000492772 CCDC74AQ96AQ1 378 aa11.16□□□□□ -0.62
SND1-215ENST00000492772 RETREG1Q9H6L5 497 aa11.16□□□□□ -0.62
SND1-215ENST00000492772 TMPRSS4Q9NRS4 437 aa11.16□□□□□ -0.62
SND1-215ENST00000492772 GULP1Q9UBP9 304 aa11.16□□□□□ -0.62
SND1-215ENST00000492772 PNMA8BQ9ULN7 279 aaPredicted RBP11.16□□□□□ -0.62
SND1-215ENST00000492772 TLN1Q9Y490 2541 aaKnown RBP11.16□□□□□ -0.62
SND1-215ENST00000492772 TMEM110-MUSTN1A8MSY1 372 aa11.15□□□□□ -0.62
SND1-215ENST00000492772 CASC3O15234 703 aaKnown RBP11.15□□□□□ -0.62
SND1-215ENST00000492772 NVLO15381 856 aaKnown RBP11.15□□□□□ -0.62
SND1-215ENST00000492772 NOBOXO60393 691 aa11.15□□□□□ -0.62
SND1-215ENST00000492772 RASGRP1O95267 797 aa11.15□□□□□ -0.62
SND1-215ENST00000492772 POP4O95707 220 aaKnown RBP11.15□□□□□ -0.62
SND1-215ENST00000492772 CD160O95971 181 aa11.15□□□□□ -0.62
SND1-215ENST00000492772 RPLP0P05388 317 aaKnown RBP11.15□□□□□ -0.62
SND1-215ENST00000492772 CTSEP14091 401 aa11.15□□□□□ -0.62
SND1-215ENST00000492772 GKP32189 559 aa11.15□□□□□ -0.62
SND1-215ENST00000492772 CDH5P33151 784 aaPredicted RBP11.15□□□□□ -0.62
SND1-215ENST00000492772 EIF4A3P38919 411 aaKnown RBP11.15□□□□□ -0.62
SND1-215ENST00000492772 MAPKAPK2P49137 400 aa11.15□□□□□ -0.62
SND1-215ENST00000492772 PEX5P50542 639 aa11.15□□□□□ -0.62
SND1-215ENST00000492772 HK3P52790 923 aa11.15□□□□□ -0.62
SND1-215ENST00000492772 BPIFB4P59827 614 aa11.15□□□□□ -0.62
SND1-215ENST00000492772 C1QBPQ07021 282 aaKnown RBP11.15□□□□□ -0.62
SND1-215ENST00000492772 MANEAQ5SRI9 462 aa11.15□□□□□ -0.62
SND1-215ENST00000492772 ARTNQ5T4W7 220 aa11.15□□□□□ -0.62
SND1-215ENST00000492772 BNIPLQ7Z465 357 aa11.15□□□□□ -0.62
SND1-215ENST00000492772 SLC47A2Q86VL8 602 aa11.15□□□□□ -0.62
SND1-215ENST00000492772 GKN2Q86XP6 184 aa11.15□□□□□ -0.62
SND1-215ENST00000492772 ZSCAN1Q8NBB4 408 aa11.15□□□□□ -0.62
SND1-215ENST00000492772 TP53I13Q8NBR0 393 aaPredicted RBP11.15□□□□□ -0.62
SND1-215ENST00000492772 MSANTD4Q8NCY6 345 aa11.15□□□□□ -0.62
SND1-215ENST00000492772 ATL2Q8NHH9 583 aa11.15□□□□□ -0.62
SND1-215ENST00000492772 EXTL1Q92935 676 aa11.15□□□□□ -0.62
SND1-215ENST00000492772 TMEM159Q96B96 161 aa11.15□□□□□ -0.62
SND1-215ENST00000492772 C18orf8Q96DM3 657 aa11.15□□□□□ -0.62
SND1-215ENST00000492772 KLHL32Q96NJ5 620 aa11.15□□□□□ -0.62
SND1-215ENST00000492772 EPAS1Q99814 870 aa11.15□□□□□ -0.62
SND1-215ENST00000492772 SEMA3CQ99985 751 aa11.15□□□□□ -0.62
SND1-215ENST00000492772 CPEB1Q9BZB8 566 aaKnown RBP11.15□□□□□ -0.62
SND1-215ENST00000492772 EDEM3Q9BZQ6 932 aa11.15□□□□□ -0.62
SND1-215ENST00000492772 FOXP3Q9BZS1 431 aa11.15□□□□□ -0.62
SND1-215ENST00000492772 PDCL3Q9H2J4 239 aa11.15□□□□□ -0.62
SND1-215ENST00000492772 PLCB1Q9NQ66 1216 aa11.15□□□□□ -0.62
SND1-215ENST00000492772 SIRPGQ9P1W8 387 aa11.15□□□□□ -0.62
SND1-215ENST00000492772 PISDQ9UG56 409 aa11.15□□□□□ -0.62
SND1-215ENST00000492772 HPCAL4Q9UM19 191 aa11.15□□□□□ -0.62
SND1-215ENST00000492772 GPR34Q9UPC5 381 aa11.15□□□□□ -0.62
SND1-215ENST00000492772 LOXL2Q9Y4K0 774 aa11.15□□□□□ -0.62
SND1-215ENST00000492772 BSNQ9UPA5 3926 aa11.14□□□□□ -0.63
SND1-215ENST00000492772 ZSCAN5CA6NGD5 496 aaPredicted RBP11.14□□□□□ -0.63
SND1-215ENST00000492772 PPFIA2O75334 1257 aa11.14□□□□□ -0.63
SND1-215ENST00000492772 CELA2BP08218 269 aaPredicted RBP11.14□□□□□ -0.63
SND1-215ENST00000492772 HGFP14210 728 aa11.14□□□□□ -0.63
SND1-215ENST00000492772 PON1P27169 355 aa11.14□□□□□ -0.63
SND1-215ENST00000492772 HTR1BP28222 390 aa11.14□□□□□ -0.63
SND1-215ENST00000492772 CLCN1P35523 988 aa11.14□□□□□ -0.63
SND1-215ENST00000492772 FLT3P36888 993 aa11.14□□□□□ -0.63
SND1-215ENST00000492772 ACVRL1P37023 503 aa11.14□□□□□ -0.63
SND1-215ENST00000492772 SUOXP51687 545 aa11.14□□□□□ -0.63
SND1-215ENST00000492772 CCL7P80098 99 aa11.14□□□□□ -0.63
SND1-215ENST00000492772 NRG1Q02297 640 aaPredicted RBP11.14□□□□□ -0.63
SND1-215ENST00000492772 APBA1Q02410 837 aa11.14□□□□□ -0.63
SND1-215ENST00000492772 RAD51Q06609 339 aa11.14□□□□□ -0.63
SND1-215ENST00000492772 IRF4Q15306 451 aa11.14□□□□□ -0.63
SND1-215ENST00000492772 TGIF1Q15583 401 aa11.14□□□□□ -0.63
SND1-215ENST00000492772 MYLK3Q32MK0 819 aa11.14□□□□□ -0.63
SND1-215ENST00000492772 GDPD4Q6W3E5 623 aa11.14□□□□□ -0.63
SND1-215ENST00000492772 ZNF574Q6ZN55 896 aaPredicted RBP11.14□□□□□ -0.63
SND1-215ENST00000492772 TTC7BQ86TV6 843 aa11.14□□□□□ -0.63
SND1-215ENST00000492772 FAM131BQ86XD5 332 aa11.14□□□□□ -0.63
SND1-215ENST00000492772 XYLT1Q86Y38 959 aa11.14□□□□□ -0.63
SND1-215ENST00000492772 HID1Q8IV36 788 aa11.14□□□□□ -0.63
SND1-215ENST00000492772 GDAP1L1Q96MZ0 367 aa11.14□□□□□ -0.63
SND1-215ENST00000492772 MAGEH1Q9H213 219 aa11.14□□□□□ -0.63
SND1-215ENST00000492772 LRRN3Q9H3W5 708 aa11.14□□□□□ -0.63
SND1-215ENST00000492772 MBNL1Q9NR56 388 aaKnown RBP11.14□□□□□ -0.63
SND1-215ENST00000492772 RABGEF1Q9UJ41 708 aa11.14□□□□□ -0.63
SND1-215ENST00000492772 PCDHGA4Q9Y5G9 962 aa11.14□□□□□ -0.63
SND1-215ENST00000492772 ACTL7AQ9Y615 435 aa11.14□□□□□ -0.63
SND1-215ENST00000492772 AHCTF1Q8WYP5 2266 aa11.14□□□□□ -0.63
SND1-215ENST00000492772 LRRK1Q38SD2 2015 aa11.13□□□□□ -0.63
SND1-215ENST00000492772 A0A1W2PQM1 296 aa11.13□□□□□ -0.63
SND1-215ENST00000492772 BIN1O00499 593 aa11.13□□□□□ -0.63
SND1-215ENST00000492772 SUV39H1O43463 412 aa11.13□□□□□ -0.63
SND1-215ENST00000492772 MMP20O60882 483 aa11.13□□□□□ -0.63
SND1-215ENST00000492772 RAMP2O60895 175 aa11.13□□□□□ -0.63
SND1-215ENST00000492772 LSM8O95777 96 aaKnown RBP11.13□□□□□ -0.63
SND1-215ENST00000492772 IGSF6O95976 241 aa11.13□□□□□ -0.63
SND1-215ENST00000492772 FAM87AP0C7U9 286 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms