RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 PSMG2Q969U7 264 aa12.99□□□□□ -0.33
PRAME-213ENST00000492657 GPR62Q9BZJ7 368 aa12.99□□□□□ -0.33
PRAME-213ENST00000492657 CRISPLD1Q9H336 500 aa12.99□□□□□ -0.33
PRAME-213ENST00000492657 STN1Q9H668 368 aaKnown RBP12.99□□□□□ -0.33
PRAME-213ENST00000492657 ENTPD7Q9NQZ7 604 aa12.99□□□□□ -0.33
PRAME-213ENST00000492657 TREX1Q9NSU2 369 aa12.99□□□□□ -0.33
PRAME-213ENST00000492657 XPR1Q9UBH6 696 aa12.99□□□□□ -0.33
PRAME-213ENST00000492657 FBXO5Q9UKT4 447 aa12.99□□□□□ -0.33
PRAME-213ENST00000492657 SORCS3Q9UPU3 1222 aa12.99□□□□□ -0.33
PRAME-213ENST00000492657 TLR6Q9Y2C9 796 aa12.99□□□□□ -0.33
PRAME-213ENST00000492657 MIA3Q5JRA6 1907 aa12.99□□□□□ -0.33
PRAME-213ENST00000492657 TET1Q8NFU7 2136 aa12.99□□□□□ -0.33
PRAME-213ENST00000492657 TARM1B6A8C7 271 aa12.98□□□□□ -0.33
PRAME-213ENST00000492657 EPHA3P29320 983 aa12.98□□□□□ -0.33
PRAME-213ENST00000492657 PBX3P40426 434 aa12.98□□□□□ -0.33
PRAME-213ENST00000492657 SLC12A1Q13621 1099 aa12.98□□□□□ -0.33
PRAME-213ENST00000492657 LBRQ14739 615 aaKnown RBP12.98□□□□□ -0.33
PRAME-213ENST00000492657 CTXN3Q4LDR2 81 aa12.98□□□□□ -0.33
PRAME-213ENST00000492657 TSTD2Q5T7W7 516 aa12.98□□□□□ -0.33
PRAME-213ENST00000492657 FAM171A1Q5VUB5 890 aa12.98□□□□□ -0.33
PRAME-213ENST00000492657 POTEHQ6S545 545 aa12.98□□□□□ -0.33
PRAME-213ENST00000492657 NET1Q7Z628 596 aaPredicted RBP12.98□□□□□ -0.33
PRAME-213ENST00000492657 RNF135Q8IUD6 432 aa12.98□□□□□ -0.33
PRAME-213ENST00000492657 LSMEM2Q8N112 164 aa12.98□□□□□ -0.33
PRAME-213ENST00000492657 CCNYL1Q8N7R7 359 aa12.98□□□□□ -0.33
PRAME-213ENST00000492657 PCSK9Q8NBP7 692 aaKnown RBP12.98□□□□□ -0.33
PRAME-213ENST00000492657 STYXQ8WUJ0 223 aa12.98□□□□□ -0.33
PRAME-213ENST00000492657 GBP5Q96PP8 586 aa12.98□□□□□ -0.33
PRAME-213ENST00000492657 ZNF184Q99676 751 aaPredicted RBP12.98□□□□□ -0.33
PRAME-213ENST00000492657 ILKAPQ9H0C8 392 aaPredicted RBP12.98□□□□□ -0.33
PRAME-213ENST00000492657 PACSIN3Q9UKS6 424 aa12.98□□□□□ -0.33
PRAME-213ENST00000492657 MTF2Q9Y483 593 aaPredicted RBP12.98□□□□□ -0.33
PRAME-213ENST00000492657 TMEM114B3SHH9 223 aa12.98□□□□□ -0.33
PRAME-213ENST00000492657 AP3B1O00203 1094 aa12.98□□□□□ -0.33
PRAME-213ENST00000492657 RPLP2P05387 115 aaKnown RBP12.98□□□□□ -0.33
PRAME-213ENST00000492657 ANPEPP15144 967 aa12.98□□□□□ -0.33
PRAME-213ENST00000492657 RAB10P61026 200 aa12.98□□□□□ -0.33
PRAME-213ENST00000492657 CUL3Q13618 768 aa12.98□□□□□ -0.33
PRAME-213ENST00000492657 LIPMQ5VYY2 423 aa12.98□□□□□ -0.33
PRAME-213ENST00000492657 TMEM198Q66K66 360 aa12.98□□□□□ -0.33
PRAME-213ENST00000492657 LRRC8EQ6NSJ5 796 aa12.98□□□□□ -0.33
PRAME-213ENST00000492657 TIGD7Q6NT04 549 aaPredicted RBP12.98□□□□□ -0.33
PRAME-213ENST00000492657 NEPROQ6NW34 567 aa12.98□□□□□ -0.33
PRAME-213ENST00000492657 FBXL22Q6P050 247 aa12.98□□□□□ -0.33
PRAME-213ENST00000492657 IZUMO2Q6UXV1 221 aa12.98□□□□□ -0.33
PRAME-213ENST00000492657 RSPO2Q6UXX9 243 aaPredicted RBP12.98□□□□□ -0.33
PRAME-213ENST00000492657 TMC7Q7Z402 723 aa12.98□□□□□ -0.33
PRAME-213ENST00000492657 ARHGAP22Q7Z5H3 698 aa12.98□□□□□ -0.33
PRAME-213ENST00000492657 CNTN4Q8IWV2 1026 aa12.98□□□□□ -0.33
PRAME-213ENST00000492657 NUF2Q9BZD4 464 aa12.98□□□□□ -0.33
PRAME-213ENST00000492657 C1orf21Q9H246 121 aa12.98□□□□□ -0.33
PRAME-213ENST00000492657 PRDM5Q9NQX1 630 aaPredicted RBP12.98□□□□□ -0.33
PRAME-213ENST00000492657 ANGPTL2Q9UKU9 493 aa12.98□□□□□ -0.33
PRAME-213ENST00000492657 ANKRD6Q9Y2G4 727 aa12.98□□□□□ -0.33
PRAME-213ENST00000492657 KCTD3Q9Y597 815 aa12.98□□□□□ -0.33
PRAME-213ENST00000492657 FNDC1Q4ZHG4 1894 aaPredicted RBP12.98□□□□□ -0.33
PRAME-213ENST00000492657 TMEM233B4DJY2 109 aa12.98□□□□□ -0.33
PRAME-213ENST00000492657 INPPL1O15357 1258 aa12.98□□□□□ -0.33
PRAME-213ENST00000492657 GRID2O43424 1007 aa12.98□□□□□ -0.33
PRAME-213ENST00000492657 MMP2P08253 660 aa12.98□□□□□ -0.33
PRAME-213ENST00000492657 STMN1P16949 149 aa12.98□□□□□ -0.33
PRAME-213ENST00000492657 TFEBP19484 476 aa12.98□□□□□ -0.33
PRAME-213ENST00000492657 SERPINB5P36952 375 aa12.98□□□□□ -0.33
PRAME-213ENST00000492657 ACTR3P61158 418 aa12.98□□□□□ -0.33
PRAME-213ENST00000492657 KLF10Q13118 480 aa12.98□□□□□ -0.33
PRAME-213ENST00000492657 HEXDCQ8WVB3 486 aa12.98□□□□□ -0.33
PRAME-213ENST00000492657 CCDC124Q96CT7 223 aaKnown RBP12.98□□□□□ -0.33
PRAME-213ENST00000492657 DNAJC1Q96KC8 554 aaKnown RBP12.98□□□□□ -0.33
PRAME-213ENST00000492657 TSNARE1Q96NA8 513 aa12.98□□□□□ -0.33
PRAME-213ENST00000492657 FAM193BQ96PV7 902 aaPredicted RBP12.98□□□□□ -0.33
PRAME-213ENST00000492657 SLC25A51Q9H1U9 297 aa12.98□□□□□ -0.33
PRAME-213ENST00000492657 NSMCE4AQ9NXX6 385 aa12.98□□□□□ -0.33
PRAME-213ENST00000492657 PPM1HQ9ULR3 514 aa12.98□□□□□ -0.33
PRAME-213ENST00000492657 TLL2Q9Y6L7 1015 aa12.98□□□□□ -0.33
PRAME-213ENST00000492657 ARHGEF37A1IGU5 675 aa12.97□□□□□ -0.33
PRAME-213ENST00000492657 NT5C1B-RDH14C9J2C7 533 aa12.97□□□□□ -0.33
PRAME-213ENST00000492657 F8W8V4 182 aa12.97□□□□□ -0.33
PRAME-213ENST00000492657 MATN2O00339 956 aa12.97□□□□□ -0.33
PRAME-213ENST00000492657 BUD23O43709 281 aaKnown RBP12.97□□□□□ -0.33
PRAME-213ENST00000492657 CABYRO75952 493 aa12.97□□□□□ -0.33
PRAME-213ENST00000492657 OR6B1O95007 311 aa12.97□□□□□ -0.33
PRAME-213ENST00000492657 EOMESO95936 686 aa12.97□□□□□ -0.33
PRAME-213ENST00000492657 DNAJB2P25686 324 aa12.97□□□□□ -0.33
PRAME-213ENST00000492657 CST5P28325 142 aaPredicted RBP12.97□□□□□ -0.33
PRAME-213ENST00000492657 HADHAP40939 763 aa12.97□□□□□ -0.33
PRAME-213ENST00000492657 TAF10Q12962 218 aa12.97□□□□□ -0.33
PRAME-213ENST00000492657 TRMT5Q32P41 509 aaKnown RBP12.97□□□□□ -0.33
PRAME-213ENST00000492657 PPM1LQ5SGD2 360 aa12.97□□□□□ -0.33
PRAME-213ENST00000492657 RPS27LQ71UM5 84 aaKnown RBP12.97□□□□□ -0.33
PRAME-213ENST00000492657 UMODL1-AS1Q8N2C9 162 aa12.97□□□□□ -0.33
PRAME-213ENST00000492657 PGBD5Q8N414 524 aa12.97□□□□□ -0.33
PRAME-213ENST00000492657 C2CD4AQ8NCU7 369 aaPredicted RBP12.97□□□□□ -0.33
PRAME-213ENST00000492657 HIPK4Q8NE63 616 aa12.97□□□□□ -0.33
PRAME-213ENST00000492657 SH3RF2Q8TEC5 729 aa12.97□□□□□ -0.33
PRAME-213ENST00000492657 FBXO32Q969P5 355 aa12.97□□□□□ -0.33
PRAME-213ENST00000492657 MARK4Q96L34 752 aa12.97□□□□□ -0.33
PRAME-213ENST00000492657 C1orf74Q96LT6 269 aa12.97□□□□□ -0.33
PRAME-213ENST00000492657 DRC3Q9H069 523 aa12.97□□□□□ -0.33
PRAME-213ENST00000492657 TCF7L2Q9NQB0 619 aa12.97□□□□□ -0.33
PRAME-213ENST00000492657 PCDHB5Q9Y5E4 795 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms