RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 SERPINB11Q96P15 392 aa12.57□□□□□ -0.4
HMGN1-220ENST00000492280 RPRD1AQ96P16 312 aaPredicted RBP12.57□□□□□ -0.4
HMGN1-220ENST00000492280 CYP2S1Q96SQ9 504 aa12.57□□□□□ -0.4
HMGN1-220ENST00000492280 ILKAPQ9H0C8 392 aaPredicted RBP12.57□□□□□ -0.4
HMGN1-220ENST00000492280 TREX1Q9NSU2 369 aa12.57□□□□□ -0.4
HMGN1-220ENST00000492280 DSEQ9UL01 958 aa12.57□□□□□ -0.4
HMGN1-220ENST00000492280 SLC12A8A0AV02 714 aa12.56□□□□□ -0.4
HMGN1-220ENST00000492280 MAGEB16A2A368 324 aa12.56□□□□□ -0.4
HMGN1-220ENST00000492280 CACNG3O60359 315 aa12.56□□□□□ -0.4
HMGN1-220ENST00000492280 TADA2AO75478 443 aa12.56□□□□□ -0.4
HMGN1-220ENST00000492280 KLHL2O95198 593 aa12.56□□□□□ -0.4
HMGN1-220ENST00000492280 PIK3R1P27986 724 aa12.56□□□□□ -0.4
HMGN1-220ENST00000492280 HOXC13P31276 330 aa12.56□□□□□ -0.4
HMGN1-220ENST00000492280 CDK7P50613 346 aa12.56□□□□□ -0.4
HMGN1-220ENST00000492280 GEMP55040 296 aa12.56□□□□□ -0.4
HMGN1-220ENST00000492280 PTPRRQ15256 657 aa12.56□□□□□ -0.4
HMGN1-220ENST00000492280 PPP1R3AQ16821 1122 aa12.56□□□□□ -0.4
HMGN1-220ENST00000492280 C6orf163Q5TEZ5 329 aa12.56□□□□□ -0.4
HMGN1-220ENST00000492280 COLGALT2Q8IYK4 626 aa12.56□□□□□ -0.4
HMGN1-220ENST00000492280 NUP93Q8N1F7 819 aa12.56□□□□□ -0.4
HMGN1-220ENST00000492280 OR13J1Q8NGT2 312 aa12.56□□□□□ -0.4
HMGN1-220ENST00000492280 STYXQ8WUJ0 223 aa12.56□□□□□ -0.4
HMGN1-220ENST00000492280 RCN3Q96D15 328 aa12.56□□□□□ -0.4
HMGN1-220ENST00000492280 SLC24A3Q9HC58 644 aa12.56□□□□□ -0.4
HMGN1-220ENST00000492280 NDE1Q9NXR1 346 aa12.56□□□□□ -0.4
HMGN1-220ENST00000492280 DLGAP2Q9P1A6 1054 aa12.56□□□□□ -0.4
HMGN1-220ENST00000492280 ARL5AQ9Y689 179 aa12.56□□□□□ -0.4
HMGN1-220ENST00000492280 AK5Q9Y6K8 562 aa12.56□□□□□ -0.4
HMGN1-220ENST00000492280 A0A0D9SEW6 157 aa12.56□□□□□ -0.4
HMGN1-220ENST00000492280 MATN2O00339 956 aa12.56□□□□□ -0.4
HMGN1-220ENST00000492280 FGF10O15520 208 aaPredicted RBP12.56□□□□□ -0.4
HMGN1-220ENST00000492280 AOC2O75106 756 aa12.56□□□□□ -0.4
HMGN1-220ENST00000492280 MMP2P08253 660 aa12.56□□□□□ -0.4
HMGN1-220ENST00000492280 ENO3P13929 434 aaPredicted RBP12.56□□□□□ -0.4
HMGN1-220ENST00000492280 PEX2P28328 305 aa12.56□□□□□ -0.4
HMGN1-220ENST00000492280 RPL14P50914 215 aaKnown RBP12.56□□□□□ -0.4
HMGN1-220ENST00000492280 ACLYP53396 1101 aa12.56□□□□□ -0.4
HMGN1-220ENST00000492280 SREBF2Q12772 1141 aa12.56□□□□□ -0.4
HMGN1-220ENST00000492280 MAPRE1Q15691 268 aaKnown RBP12.56□□□□□ -0.4
HMGN1-220ENST00000492280 TMEM154Q6P9G4 183 aa12.56□□□□□ -0.4
HMGN1-220ENST00000492280 KDELC1Q6UW63 502 aa12.56□□□□□ -0.4
HMGN1-220ENST00000492280 PHC3Q8NDX5 983 aa12.56□□□□□ -0.4
HMGN1-220ENST00000492280 OR52K2Q8NGK3 314 aa12.56□□□□□ -0.4
HMGN1-220ENST00000492280 HDAC10Q969S8 669 aa12.56□□□□□ -0.4
HMGN1-220ENST00000492280 ADAMTS6Q9UKP5 1117 aa12.56□□□□□ -0.4
HMGN1-220ENST00000492280 PCDHB8Q9UN66 801 aa12.56□□□□□ -0.4
HMGN1-220ENST00000492280 RPL26L1Q9UNX3 145 aaKnown RBP12.56□□□□□ -0.4
HMGN1-220ENST00000492280 POMPQ9Y244 141 aa12.56□□□□□ -0.4
HMGN1-220ENST00000492280 CASP8AP2Q9UKL3 1982 aa12.56□□□□□ -0.4
HMGN1-220ENST00000492280 ATP6AP2A0A1C7CYW4 349 aa12.55□□□□□ -0.4
HMGN1-220ENST00000492280 LRRC14BA6NHZ5 514 aa12.55□□□□□ -0.4
HMGN1-220ENST00000492280 TARM1B6A8C7 271 aa12.55□□□□□ -0.4
HMGN1-220ENST00000492280 MAP3K7O43318 606 aa12.55□□□□□ -0.4
HMGN1-220ENST00000492280 ATP6AP2O75787 350 aa12.55□□□□□ -0.4
HMGN1-220ENST00000492280 ZCCHC18P0CG32 403 aa12.55□□□□□ -0.4
HMGN1-220ENST00000492280 CCDC166P0CW27 439 aa12.55□□□□□ -0.4
HMGN1-220ENST00000492280 ACADSP16219 412 aa12.55□□□□□ -0.4
HMGN1-220ENST00000492280 GLDCP23378 1020 aa12.55□□□□□ -0.4
HMGN1-220ENST00000492280 PSEN1P49768 467 aa12.55□□□□□ -0.4
HMGN1-220ENST00000492280 CSRP3P50461 194 aa12.55□□□□□ -0.4
HMGN1-220ENST00000492280 SLC12A2P55011 1212 aa12.55□□□□□ -0.4
HMGN1-220ENST00000492280 PRSS55Q6UWB4 352 aaPredicted RBP12.55□□□□□ -0.4
HMGN1-220ENST00000492280 OR13C4Q8NGS5 318 aa12.55□□□□□ -0.4
HMGN1-220ENST00000492280 NPAS2Q99743 824 aa12.55□□□□□ -0.4
HMGN1-220ENST00000492280 YIPF3Q9GZM5 350 aa12.55□□□□□ -0.4
HMGN1-220ENST00000492280 DRC3Q9H069 523 aa12.55□□□□□ -0.4
HMGN1-220ENST00000492280 GEMIN8Q9NWZ8 242 aaKnown RBP12.55□□□□□ -0.4
HMGN1-220ENST00000492280 GIMAP2Q9UG22 337 aa12.55□□□□□ -0.4
HMGN1-220ENST00000492280 COL4A4P53420 1690 aaPredicted RBP12.55□□□□□ -0.4
HMGN1-220ENST00000492280 RANBP2P49792 3224 aaKnown RBP12.55□□□□□ -0.4
HMGN1-220ENST00000492280 C9JVG2 144 aa12.55□□□□□ -0.4
HMGN1-220ENST00000492280 BMP1P13497 986 aa12.55□□□□□ -0.4
HMGN1-220ENST00000492280 DPP6P42658 865 aa12.55□□□□□ -0.4
HMGN1-220ENST00000492280 KCNC1P48547 511 aa12.55□□□□□ -0.4
HMGN1-220ENST00000492280 CDKN2DP55273 166 aa12.55□□□□□ -0.4
HMGN1-220ENST00000492280 GPR158Q5T848 1215 aa12.55□□□□□ -0.4
HMGN1-220ENST00000492280 MARC1Q5VT66 337 aa12.55□□□□□ -0.4
HMGN1-220ENST00000492280 CLEC6AQ6EIG7 209 aa12.55□□□□□ -0.4
HMGN1-220ENST00000492280 TMEM207Q6UWW9 146 aa12.55□□□□□ -0.4
HMGN1-220ENST00000492280 RNF19BQ6ZMZ0 732 aa12.55□□□□□ -0.4
HMGN1-220ENST00000492280 GK5Q6ZS86 529 aa12.55□□□□□ -0.4
HMGN1-220ENST00000492280 TRIM67Q6ZTA4 783 aa12.55□□□□□ -0.4
HMGN1-220ENST00000492280 TAS1R1Q7RTX1 841 aa12.55□□□□□ -0.4
HMGN1-220ENST00000492280 FAM193BQ96PV7 902 aaPredicted RBP12.55□□□□□ -0.4
HMGN1-220ENST00000492280 ZCWPW1Q9H0M4 648 aa12.55□□□□□ -0.4
HMGN1-220ENST00000492280 ALG9Q9H6U8 611 aa12.55□□□□□ -0.4
HMGN1-220ENST00000492280 GPAMQ9HCL2 828 aa12.55□□□□□ -0.4
HMGN1-220ENST00000492280 RAP2CQ9Y3L5 183 aa12.55□□□□□ -0.4
HMGN1-220ENST00000492280 PTGDR2Q9Y5Y4 395 aa12.55□□□□□ -0.4
HMGN1-220ENST00000492280 FNDC1Q4ZHG4 1894 aaPredicted RBP12.55□□□□□ -0.4
HMGN1-220ENST00000492280 PPP6CO00743 305 aa12.54□□□□□ -0.4
HMGN1-220ENST00000492280 HDAC3O15379 428 aa12.54□□□□□ -0.4
HMGN1-220ENST00000492280 LINGO3P0C6S8 592 aa12.54□□□□□ -0.4
HMGN1-220ENST00000492280 CDK18Q07002 472 aa12.54□□□□□ -0.4
HMGN1-220ENST00000492280 DSC1Q08554 894 aa12.54□□□□□ -0.4
HMGN1-220ENST00000492280 ASPHQ12797 758 aa12.54□□□□□ -0.4
HMGN1-220ENST00000492280 CDC16Q13042 620 aa12.54□□□□□ -0.4
HMGN1-220ENST00000492280 DUSP4Q13115 394 aa12.54□□□□□ -0.4
HMGN1-220ENST00000492280 TBCCQ15814 346 aa12.54□□□□□ -0.4
HMGN1-220ENST00000492280 DBN1Q16643 649 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms