RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 CEP44Q9C0F1 390 aa15.26■□□□□ 0.03
CDC42SE1-205ENST00000491825 KCND1Q9NSA2 647 aa15.26■□□□□ 0.03
CDC42SE1-205ENST00000491825 PYCARDQ9ULZ3 195 aa15.26■□□□□ 0.03
CDC42SE1-205ENST00000491825 HPCAL4Q9UM19 191 aa15.26■□□□□ 0.03
CDC42SE1-205ENST00000491825 EFR3BQ9Y2G0 817 aa15.26■□□□□ 0.03
CDC42SE1-205ENST00000491825 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.26■□□□□ 0.03
CDC42SE1-205ENST00000491825 SMG1Q96Q15 3661 aaKnown RBP15.25■□□□□ 0.03
CDC42SE1-205ENST00000491825 hCG_1818297A0A087WSY0 165 aa15.25■□□□□ 0.03
CDC42SE1-205ENST00000491825 A0A1B0GTQ1 180 aa15.25■□□□□ 0.03
CDC42SE1-205ENST00000491825 A0A1W2PR77 199 aa15.25■□□□□ 0.03
CDC42SE1-205ENST00000491825 LRRC72A6NJI9 287 aa15.25■□□□□ 0.03
CDC42SE1-205ENST00000491825 WNT9AO14904 365 aa15.25■□□□□ 0.03
CDC42SE1-205ENST00000491825 DDX3YO15523 660 aaKnown RBP15.25■□□□□ 0.03
CDC42SE1-205ENST00000491825 MFSD11O43934 449 aa15.25■□□□□ 0.03
CDC42SE1-205ENST00000491825 ADH1BP00325 375 aa15.25■□□□□ 0.03
CDC42SE1-205ENST00000491825 ZFXP17010 805 aaPredicted RBP15.25■□□□□ 0.03
CDC42SE1-205ENST00000491825 C5AR1P21730 350 aa15.25■□□□□ 0.03
CDC42SE1-205ENST00000491825 GLDCP23378 1020 aa15.25■□□□□ 0.03
CDC42SE1-205ENST00000491825 NNMTP40261 264 aa15.25■□□□□ 0.03
CDC42SE1-205ENST00000491825 GRK6P43250 576 aa15.25■□□□□ 0.03
CDC42SE1-205ENST00000491825 CCR5P51681 352 aa15.25■□□□□ 0.03
CDC42SE1-205ENST00000491825 METAP1P53582 386 aa15.25■□□□□ 0.03
CDC42SE1-205ENST00000491825 SFSWAPQ12872 951 aaKnown RBP15.25■□□□□ 0.03
CDC42SE1-205ENST00000491825 MEI1Q5TIA1 1274 aa15.25■□□□□ 0.03
CDC42SE1-205ENST00000491825 LRRC49Q8IUZ0 686 aa15.25■□□□□ 0.03
CDC42SE1-205ENST00000491825 PLD5Q8N7P1 536 aa15.25■□□□□ 0.03
CDC42SE1-205ENST00000491825 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.25■□□□□ 0.03
CDC42SE1-205ENST00000491825 CASKIN2Q8WXE0 1202 aa15.25■□□□□ 0.03
CDC42SE1-205ENST00000491825 RNF25Q96BH1 459 aaPredicted RBP15.25■□□□□ 0.03
CDC42SE1-205ENST00000491825 CELF6Q96J87 481 aaKnown RBP15.25■□□□□ 0.03
CDC42SE1-205ENST00000491825 SLC39A8Q9C0K1 460 aa15.25■□□□□ 0.03
CDC42SE1-205ENST00000491825 PDFQ9HBH1 243 aa15.25■□□□□ 0.03
CDC42SE1-205ENST00000491825 MFHAS1Q9Y4C4 1052 aa15.25■□□□□ 0.03
CDC42SE1-205ENST00000491825 KNL1Q8NG31 2342 aa15.25■□□□□ 0.03
CDC42SE1-205ENST00000491825 LOC400499M0QZD8 3231 aa15.24■□□□□ 0.03
CDC42SE1-205ENST00000491825 APOL1O14791 398 aa15.24■□□□□ 0.03
CDC42SE1-205ENST00000491825 TNFSF14O43557 240 aa15.24■□□□□ 0.03
CDC42SE1-205ENST00000491825 LATO43561 262 aa15.24■□□□□ 0.03
CDC42SE1-205ENST00000491825 PRAMEF11O60813 436 aa15.24■□□□□ 0.03
CDC42SE1-205ENST00000491825 CD160O95971 181 aa15.24■□□□□ 0.03
CDC42SE1-205ENST00000491825 SRCP12931 536 aa15.24■□□□□ 0.03
CDC42SE1-205ENST00000491825 PAPOLAP51003 745 aaKnown RBP15.24■□□□□ 0.03
CDC42SE1-205ENST00000491825 PPP2CBP62714 309 aa15.24■□□□□ 0.03
CDC42SE1-205ENST00000491825 PPP2CAP67775 309 aa15.24■□□□□ 0.03
CDC42SE1-205ENST00000491825 IL9RQ01113 521 aa15.24■□□□□ 0.03
CDC42SE1-205ENST00000491825 GALNT2Q10471 571 aa15.24■□□□□ 0.03
CDC42SE1-205ENST00000491825 TFDP2Q14188 446 aa15.24■□□□□ 0.03
CDC42SE1-205ENST00000491825 SHBQ15464 509 aa15.24■□□□□ 0.03
CDC42SE1-205ENST00000491825 INO80DQ53TQ3 878 aaPredicted RBP15.24■□□□□ 0.03
CDC42SE1-205ENST00000491825 ADAT2Q7Z6V5 191 aaKnown RBP15.24■□□□□ 0.03
CDC42SE1-205ENST00000491825 ELF4Q99607 663 aaPredicted RBP15.24■□□□□ 0.03
CDC42SE1-205ENST00000491825 OMDQ99983 421 aa15.24■□□□□ 0.03
CDC42SE1-205ENST00000491825 MAK16Q9BXY0 300 aaKnown RBP15.24■□□□□ 0.03
CDC42SE1-205ENST00000491825 PACSIN2Q9UNF0 486 aaPredicted RBP15.24■□□□□ 0.03
CDC42SE1-205ENST00000491825 ANKRD11Q6UB99 2663 aaPredicted RBP15.24■□□□□ 0.03
CDC42SE1-205ENST00000491825 ITPR1Q14643 2758 aa15.24■□□□□ 0.03
CDC42SE1-205ENST00000491825 CACNA1GO43497 2377 aa15.24■□□□□ 0.03
CDC42SE1-205ENST00000491825 DFFAO00273 331 aa15.23■□□□□ 0.03
CDC42SE1-205ENST00000491825 DFNA5O60443 496 aa15.23■□□□□ 0.03
CDC42SE1-205ENST00000491825 MT-CO1P00395 513 aa15.23■□□□□ 0.03
CDC42SE1-205ENST00000491825 IL1BP01584 269 aa15.23■□□□□ 0.03
CDC42SE1-205ENST00000491825 MX2P20592 715 aa15.23■□□□□ 0.03
CDC42SE1-205ENST00000491825 TGM2P21980 687 aa15.23■□□□□ 0.03
CDC42SE1-205ENST00000491825 C21orf59P57076 290 aa15.23■□□□□ 0.03
CDC42SE1-205ENST00000491825 IL10RBQ08334 325 aa15.23■□□□□ 0.03
CDC42SE1-205ENST00000491825 LINGO4Q6UY18 593 aa15.23■□□□□ 0.03
CDC42SE1-205ENST00000491825 MARCH9Q86YJ5 346 aa15.23■□□□□ 0.03
CDC42SE1-205ENST00000491825 CCDC50Q8IVM0 306 aa15.23■□□□□ 0.03
CDC42SE1-205ENST00000491825 ATPAF2Q8N5M1 289 aa15.23■□□□□ 0.03
CDC42SE1-205ENST00000491825 OR14C36Q8NHC7 312 aa15.23■□□□□ 0.03
CDC42SE1-205ENST00000491825 FATE1Q969F0 183 aa15.23■□□□□ 0.03
CDC42SE1-205ENST00000491825 ISG20Q96AZ6 181 aaKnown RBP15.23■□□□□ 0.03
CDC42SE1-205ENST00000491825 DTLQ9NZJ0 730 aa15.23■□□□□ 0.03
CDC42SE1-205ENST00000491825 IPO11Q9UI26 975 aaKnown RBP15.23■□□□□ 0.03
CDC42SE1-205ENST00000491825 SARDHQ9UL12 918 aa15.23■□□□□ 0.03
CDC42SE1-205ENST00000491825 TPX2Q9ULW0 747 aaKnown RBP15.23■□□□□ 0.03
CDC42SE1-205ENST00000491825 GPSM3Q9Y4H4 160 aa15.23■□□□□ 0.03
CDC42SE1-205ENST00000491825 USP27XA6NNY8 438 aa15.22■□□□□ 0.03
CDC42SE1-205ENST00000491825 PLK4O00444 970 aa15.22■□□□□ 0.03
CDC42SE1-205ENST00000491825 KIF5CO60282 957 aa15.22■□□□□ 0.03
CDC42SE1-205ENST00000491825 MAFKO60675 156 aa15.22■□□□□ 0.03
CDC42SE1-205ENST00000491825 PYGMP11217 842 aa15.22■□□□□ 0.03
CDC42SE1-205ENST00000491825 HOXB3P14651 431 aaPredicted RBP15.22■□□□□ 0.03
CDC42SE1-205ENST00000491825 MSNP26038 577 aaKnown RBP15.22■□□□□ 0.03
CDC42SE1-205ENST00000491825 CD38P28907 300 aa15.22■□□□□ 0.03
CDC42SE1-205ENST00000491825 CETN2P41208 172 aa15.22■□□□□ 0.03
CDC42SE1-205ENST00000491825 GARSP41250 739 aaKnown RBP15.22■□□□□ 0.03
CDC42SE1-205ENST00000491825 NR2C2P49116 596 aa15.22■□□□□ 0.03
CDC42SE1-205ENST00000491825 GBE1Q04446 702 aa15.22■□□□□ 0.03
CDC42SE1-205ENST00000491825 CAMK2BQ13554 666 aa15.22■□□□□ 0.03
CDC42SE1-205ENST00000491825 RFTN1Q14699 578 aaPredicted RBP15.22■□□□□ 0.03
CDC42SE1-205ENST00000491825 DLG2Q15700 870 aa15.22■□□□□ 0.03
CDC42SE1-205ENST00000491825 SMAD1Q15797 465 aaKnown RBP15.22■□□□□ 0.03
CDC42SE1-205ENST00000491825 HS1BP3Q53T59 392 aa15.22■□□□□ 0.03
CDC42SE1-205ENST00000491825 PRAMEF14Q5SWL7 426 aa15.22■□□□□ 0.03
CDC42SE1-205ENST00000491825 AGBL4Q5VU57 503 aa15.22■□□□□ 0.03
CDC42SE1-205ENST00000491825 C22orf39Q6P5X5 142 aa15.22■□□□□ 0.03
CDC42SE1-205ENST00000491825 BBS12Q6ZW61 710 aa15.22■□□□□ 0.03
CDC42SE1-205ENST00000491825 ZNF354CQ86Y25 554 aa15.22■□□□□ 0.03
CDC42SE1-205ENST00000491825 RFX6Q8HWS3 928 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms