RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 CMC1Q7Z7K0 106 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 OR4L1Q8NH43 312 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 STYXQ8WUJ0 223 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 HMCESQ96FZ2 354 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 SPATS2LQ9NUQ6 558 aaKnown RBP7.41□□□□□ -1.22
NPHP3-208ENST00000490993 SNX10Q9Y5X0 201 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 PSME4Q14997 1843 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 ZNF197O14709 1029 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 CD3EAPO15446 510 aaKnown RBP7.41□□□□□ -1.22
NPHP3-208ENST00000490993 TMCC1O94876 653 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 LPOP22079 712 aaPredicted RBP7.41□□□□□ -1.22
NPHP3-208ENST00000490993 AKT1P31749 480 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 CCNFP41002 786 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 NAGLUP54802 743 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 NRLP54845 237 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 CTBP1Q13363 440 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 KRT80Q6KB66 452 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 IGDCC3Q8IVU1 814 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 TNIP2Q8NFZ5 429 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 RP9Q8TA86 221 aaKnown RBP7.41□□□□□ -1.22
NPHP3-208ENST00000490993 PPP2R3CQ969Q6 453 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 TUBGCP3Q96CW5 907 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 MFSD3Q96ES6 412 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 CEP295NLQ96MC4 621 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 OLFM3Q96PB7 478 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 CCDC28BQ9BUN5 200 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 SHCBP1LQ9BZQ2 653 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 TMPRSS4Q9NRS4 437 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 MIOSQ9NXC5 875 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 ORC6Q9Y5N6 252 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 CXorf49A8MYA2 514 aaPredicted RBP7.41□□□□□ -1.22
NPHP3-208ENST00000490993 GNGT2O14610 69 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 HSPA1AP0DMV8 641 aaKnown RBP7.41□□□□□ -1.22
NPHP3-208ENST00000490993 HSPA1BP0DMV9 641 aaKnown RBP7.41□□□□□ -1.22
NPHP3-208ENST00000490993 NMBRP28336 390 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 RABGGTBP53611 331 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 GNA12Q03113 381 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 SLC10A2Q12908 348 aaPredicted RBP7.41□□□□□ -1.22
NPHP3-208ENST00000490993 PDE1CQ14123 709 aaPredicted RBP7.41□□□□□ -1.22
NPHP3-208ENST00000490993 SYTL3Q4VX76 610 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 RASIP1Q5U651 963 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 SNX30Q5VWJ9 437 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 TXNDC11Q6PKC3 985 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 DEFB107AQ8IZN7 70 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 OR56A4Q8NGH8 313 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 HHIPL1Q96JK4 782 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 FEM1CQ96JP0 617 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 DEFB118Q96PH6 123 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 OSBPL1AQ9BXW6 950 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 RAD18Q9NS91 495 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 XPR1Q9UBH6 696 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 LNPEPQ9UIQ6 1025 aa7.41□□□□□ -1.22
NPHP3-208ENST00000490993 TNPO3Q9Y5L0 923 aaKnown RBP7.41□□□□□ -1.22
NPHP3-208ENST00000490993 OAZ2O95190 189 aa7.4□□□□□ -1.22
NPHP3-208ENST00000490993 HDCP19113 662 aa7.4□□□□□ -1.22
NPHP3-208ENST00000490993 SERPINA4P29622 427 aa7.4□□□□□ -1.22
NPHP3-208ENST00000490993 MAXP61244 160 aa7.4□□□□□ -1.22
NPHP3-208ENST00000490993 DSG1Q02413 1049 aa7.4□□□□□ -1.22
NPHP3-208ENST00000490993 MED21Q13503 144 aa7.4□□□□□ -1.22
NPHP3-208ENST00000490993 GTF2H3Q13889 308 aa7.4□□□□□ -1.22
NPHP3-208ENST00000490993 FBXO22Q8NEZ5 403 aa7.4□□□□□ -1.22
NPHP3-208ENST00000490993 GPR152Q8TDT2 470 aa7.4□□□□□ -1.22
NPHP3-208ENST00000490993 DENND1AQ8TEH3 1009 aa7.4□□□□□ -1.22
NPHP3-208ENST00000490993 HDAC10Q969S8 669 aa7.4□□□□□ -1.22
NPHP3-208ENST00000490993 KLHL5Q96PQ7 755 aa7.4□□□□□ -1.22
NPHP3-208ENST00000490993 KIFC1Q9BW19 673 aa7.4□□□□□ -1.22
NPHP3-208ENST00000490993 ARHGEF3Q9NR81 526 aa7.4□□□□□ -1.22
NPHP3-208ENST00000490993 TMEM248Q9NWD8 314 aa7.4□□□□□ -1.22
NPHP3-208ENST00000490993 SMPD4Q9NXE4 827 aa7.4□□□□□ -1.22
NPHP3-208ENST00000490993 WWOXQ9NZC7 414 aa7.4□□□□□ -1.22
NPHP3-208ENST00000490993 AFF4Q9UHB7 1163 aaKnown RBP7.4□□□□□ -1.22
NPHP3-208ENST00000490993 HS3ST4Q9Y661 456 aa7.4□□□□□ -1.22
NPHP3-208ENST00000490993 A0A1B0GVM2 712 aa7.4□□□□□ -1.22
NPHP3-208ENST00000490993 TCAF2A6NFQ2 919 aa7.4□□□□□ -1.22
NPHP3-208ENST00000490993 RAD51BO15315 384 aa7.4□□□□□ -1.22
NPHP3-208ENST00000490993 MGRN1O60291 552 aa7.4□□□□□ -1.22
NPHP3-208ENST00000490993 TBL1XO60907 577 aa7.4□□□□□ -1.22
NPHP3-208ENST00000490993 CSPG5O95196 566 aa7.4□□□□□ -1.22
NPHP3-208ENST00000490993 DDX5P17844 614 aaKnown RBP7.4□□□□□ -1.22
NPHP3-208ENST00000490993 CDC25CP30307 473 aa7.4□□□□□ -1.22
NPHP3-208ENST00000490993 ADSLP30566 484 aaPredicted RBP7.4□□□□□ -1.22
NPHP3-208ENST00000490993 GRIA1P42261 906 aa7.4□□□□□ -1.22
NPHP3-208ENST00000490993 IL2P60568 153 aa7.4□□□□□ -1.22
NPHP3-208ENST00000490993 GRM3Q14832 879 aa7.4□□□□□ -1.22
NPHP3-208ENST00000490993 PPM1LQ5SGD2 360 aa7.4□□□□□ -1.22
NPHP3-208ENST00000490993 CST9Q5W186 159 aa7.4□□□□□ -1.22
NPHP3-208ENST00000490993 C16orf59Q7L2K0 433 aa7.4□□□□□ -1.22
NPHP3-208ENST00000490993 SPATA22Q8NHS9 363 aa7.4□□□□□ -1.22
NPHP3-208ENST00000490993 PHF21BQ96EK2 531 aa7.4□□□□□ -1.22
NPHP3-208ENST00000490993 MOCS1Q9NZB8 636 aa7.4□□□□□ -1.22
NPHP3-208ENST00000490993 CACNG4Q9UBN1 327 aa7.4□□□□□ -1.22
NPHP3-208ENST00000490993 FAM8A1Q9UBU6 413 aa7.4□□□□□ -1.22
NPHP3-208ENST00000490993 CHKBQ9Y259 395 aa7.4□□□□□ -1.22
NPHP3-208ENST00000490993 EIF3LQ9Y262 564 aaKnown RBP7.4□□□□□ -1.22
NPHP3-208ENST00000490993 C15orf41Q9Y2V0 281 aa7.4□□□□□ -1.22
NPHP3-208ENST00000490993 RGSL1A5PLK6 1076 aa7.4□□□□□ -1.23
NPHP3-208ENST00000490993 TMEM189-UBE2V1I3L0A0 370 aa7.4□□□□□ -1.23
NPHP3-208ENST00000490993 DCXO43602 365 aa7.4□□□□□ -1.23
NPHP3-208ENST00000490993 XYLBO75191 536 aa7.4□□□□□ -1.23
NPHP3-208ENST00000490993 ADH1AP07327 375 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms