RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 I6L893 689 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P38-201ENST00000490557 RGS14O43566 566 aa5.1□□□□□ -1.59
HMGB1P38-201ENST00000490557 LDB2O43679 373 aa5.1□□□□□ -1.59
HMGB1P38-201ENST00000490557 NAGAP17050 411 aa5.1□□□□□ -1.59
HMGB1P38-201ENST00000490557 PAX3P23760 479 aa5.1□□□□□ -1.59
HMGB1P38-201ENST00000490557 DCTDP32321 178 aa5.1□□□□□ -1.59
HMGB1P38-201ENST00000490557 TTKP33981 857 aa5.1□□□□□ -1.59
HMGB1P38-201ENST00000490557 MLH1P40692 756 aa5.1□□□□□ -1.59
HMGB1P38-201ENST00000490557 PMS2P54278 862 aa5.1□□□□□ -1.59
HMGB1P38-201ENST00000490557 NR1H2P55055 460 aa5.1□□□□□ -1.59
HMGB1P38-201ENST00000490557 FAM27E3Q08E93 113 aa5.1□□□□□ -1.59
HMGB1P38-201ENST00000490557 HIST2H2ACQ16777 129 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P38-201ENST00000490557 ACAD10Q6JQN1 1059 aa5.1□□□□□ -1.59
HMGB1P38-201ENST00000490557 CPLX2Q6PUV4 134 aaKnown RBP5.1□□□□□ -1.59
HMGB1P38-201ENST00000490557 ADGRF5Q8IZF2 1346 aa5.1□□□□□ -1.59
HMGB1P38-201ENST00000490557 FBXL14Q8N1E6 418 aa5.1□□□□□ -1.59
HMGB1P38-201ENST00000490557 GJC3Q8NFK1 279 aa5.1□□□□□ -1.59
HMGB1P38-201ENST00000490557 NFKBIDQ8NI38 313 aa5.1□□□□□ -1.59
HMGB1P38-201ENST00000490557 URB1-AS1Q96HZ7 61 aa5.1□□□□□ -1.59
HMGB1P38-201ENST00000490557 KLHL15Q96M94 604 aa5.1□□□□□ -1.59
HMGB1P38-201ENST00000490557 UNC45AQ9H3U1 944 aa5.1□□□□□ -1.59
HMGB1P38-201ENST00000490557 C20orf141Q9NUB4 165 aa5.1□□□□□ -1.59
HMGB1P38-201ENST00000490557 ANKRD10Q9NXR5 420 aa5.1□□□□□ -1.59
HMGB1P38-201ENST00000490557 NDRG3Q9UGV2 375 aa5.1□□□□□ -1.59
HMGB1P38-201ENST00000490557 SARDHQ9UL12 918 aa5.1□□□□□ -1.59
HMGB1P38-201ENST00000490557 CAMK2AQ9UQM7 478 aa5.1□□□□□ -1.59
HMGB1P38-201ENST00000490557 FAM96BQ9Y3D0 163 aa5.1□□□□□ -1.59
HMGB1P38-201ENST00000490557 INSIG1O15503 277 aa5.09□□□□□ -1.59
HMGB1P38-201ENST00000490557 F9P00740 461 aa5.09□□□□□ -1.59
HMGB1P38-201ENST00000490557 GNLYP22749 145 aa5.09□□□□□ -1.59
HMGB1P38-201ENST00000490557 ABCD1P33897 745 aa5.09□□□□□ -1.59
HMGB1P38-201ENST00000490557 THPOP40225 353 aa5.09□□□□□ -1.59
HMGB1P38-201ENST00000490557 CDKN2AP42771 156 aaKnown RBP5.09□□□□□ -1.59
HMGB1P38-201ENST00000490557 NUDT6P53370 316 aa5.09□□□□□ -1.59
HMGB1P38-201ENST00000490557 DSC1Q08554 894 aa5.09□□□□□ -1.59
HMGB1P38-201ENST00000490557 TRAF1Q13077 416 aa5.09□□□□□ -1.59
HMGB1P38-201ENST00000490557 GPS2Q13227 327 aa5.09□□□□□ -1.59
HMGB1P38-201ENST00000490557 ZNF284Q2VY69 593 aa5.09□□□□□ -1.59
HMGB1P38-201ENST00000490557 PRAMEF19Q5SWL8 479 aa5.09□□□□□ -1.59
HMGB1P38-201ENST00000490557 C9orf47Q6ZRZ4 202 aa5.09□□□□□ -1.59
HMGB1P38-201ENST00000490557 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P38-201ENST00000490557 MB21D2Q8IYB1 491 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P38-201ENST00000490557 Q8N9P0 234 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P38-201ENST00000490557 PCYOX1LQ8NBM8 494 aa5.09□□□□□ -1.59
HMGB1P38-201ENST00000490557 NTPCRQ9BSD7 190 aaKnown RBP5.09□□□□□ -1.59
HMGB1P38-201ENST00000490557 HEMGNQ9BXL5 484 aa5.09□□□□□ -1.59
HMGB1P38-201ENST00000490557 TMEM51Q9NW97 253 aa5.09□□□□□ -1.59
HMGB1P38-201ENST00000490557 CBY3A6NI87 242 aa5.08□□□□□ -1.6
HMGB1P38-201ENST00000490557 HSPB2A8KAH6 182 aa5.08□□□□□ -1.6
HMGB1P38-201ENST00000490557 INAFM1C9JVW0 142 aa5.08□□□□□ -1.6
HMGB1P38-201ENST00000490557 KLRF2D3W0D1 207 aa5.08□□□□□ -1.6
HMGB1P38-201ENST00000490557 EPB41L2O43491 1005 aaKnown RBP5.08□□□□□ -1.6
HMGB1P38-201ENST00000490557 LCATP04180 440 aa5.08□□□□□ -1.6
HMGB1P38-201ENST00000490557 ATP1A3P13637 1013 aa5.08□□□□□ -1.6
HMGB1P38-201ENST00000490557 RYKP34925 604 aa5.08□□□□□ -1.6
HMGB1P38-201ENST00000490557 CASP6P55212 293 aa5.08□□□□□ -1.6
HMGB1P38-201ENST00000490557 ST3GAL1Q11201 340 aa5.08□□□□□ -1.6
HMGB1P38-201ENST00000490557 FHL1Q13642 323 aa5.08□□□□□ -1.6
HMGB1P38-201ENST00000490557 HSPB2Q16082 182 aa5.08□□□□□ -1.6
HMGB1P38-201ENST00000490557 SLC4A8Q2Y0W8 1093 aa5.08□□□□□ -1.6
HMGB1P38-201ENST00000490557 SLC9B1Q4ZJI4 515 aa5.08□□□□□ -1.6
HMGB1P38-201ENST00000490557 PDXDC1Q6P996 788 aa5.08□□□□□ -1.6
HMGB1P38-201ENST00000490557 ATF7IPQ6VMQ6 1270 aa5.08□□□□□ -1.6
HMGB1P38-201ENST00000490557 SFTPA2Q8IWL1 248 aa5.08□□□□□ -1.6
HMGB1P38-201ENST00000490557 CCDC105Q8IYK2 499 aa5.08□□□□□ -1.6
HMGB1P38-201ENST00000490557 ZCCHC9Q8N567 271 aaKnown RBP5.08□□□□□ -1.6
HMGB1P38-201ENST00000490557 PARP16Q8N5Y8 322 aa5.08□□□□□ -1.6
HMGB1P38-201ENST00000490557 OR14A16Q8NHC5 309 aa5.08□□□□□ -1.6
HMGB1P38-201ENST00000490557 H2AFJQ9BTM1 129 aa5.08□□□□□ -1.6
HMGB1P38-201ENST00000490557 AGXT2Q9BYV1 514 aa5.08□□□□□ -1.6
HMGB1P38-201ENST00000490557 BPIFA1Q9NP55 256 aa5.08□□□□□ -1.6
HMGB1P38-201ENST00000490557 CACNA1IQ9P0X4 2223 aa5.08□□□□□ -1.6
HMGB1P38-201ENST00000490557 A0A1W2PPH5 198 aa5.07□□□□□ -1.6
HMGB1P38-201ENST00000490557 LRRC53A6NM62 1247 aa5.07□□□□□ -1.6
HMGB1P38-201ENST00000490557 J3KRW8 73 aa5.07□□□□□ -1.6
HMGB1P38-201ENST00000490557 RGS11O94810 467 aa5.07□□□□□ -1.6
HMGB1P38-201ENST00000490557 NTN1O95631 604 aa5.07□□□□□ -1.6
HMGB1P38-201ENST00000490557 ALPLP05186 524 aa5.07□□□□□ -1.6
HMGB1P38-201ENST00000490557 HEXAP06865 529 aa5.07□□□□□ -1.6
HMGB1P38-201ENST00000490557 SRD5A1P18405 259 aa5.07□□□□□ -1.6
HMGB1P38-201ENST00000490557 PCYT1AP49585 367 aa5.07□□□□□ -1.6
HMGB1P38-201ENST00000490557 EIF3BP55884 814 aaKnown RBP5.07□□□□□ -1.6
HMGB1P38-201ENST00000490557 CLDN2P57739 230 aa5.07□□□□□ -1.6
HMGB1P38-201ENST00000490557 LINC00205P59089 165 aa5.07□□□□□ -1.6
HMGB1P38-201ENST00000490557 PTP4A2Q12974 167 aa5.07□□□□□ -1.6
HMGB1P38-201ENST00000490557 MYBPC2Q14324 1141 aa5.07□□□□□ -1.6
HMGB1P38-201ENST00000490557 ESCO2Q56NI9 601 aa5.07□□□□□ -1.6
HMGB1P38-201ENST00000490557 TYW3Q6IPR3 259 aaKnown RBP5.07□□□□□ -1.6
HMGB1P38-201ENST00000490557 LRRC8EQ6NSJ5 796 aa5.07□□□□□ -1.6
HMGB1P38-201ENST00000490557 TRILQ7L0X0 811 aa5.07□□□□□ -1.6
HMGB1P38-201ENST00000490557 PELI3Q8N2H9 469 aa5.07□□□□□ -1.6
HMGB1P38-201ENST00000490557 PRR26Q8N8Z3 221 aa5.07□□□□□ -1.6
HMGB1P38-201ENST00000490557 GPT2Q8TD30 523 aa5.07□□□□□ -1.6
HMGB1P38-201ENST00000490557 LBHD1Q9BQE6 289 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P38-201ENST00000490557 MXRA8Q9BRK3 442 aa5.07□□□□□ -1.6
HMGB1P38-201ENST00000490557 TMEM204Q9BSN7 226 aa5.07□□□□□ -1.6
HMGB1P38-201ENST00000490557 MSTO1Q9BUK6 570 aa5.07□□□□□ -1.6
HMGB1P38-201ENST00000490557 SMYD2Q9NRG4 433 aa5.07□□□□□ -1.6
HMGB1P38-201ENST00000490557 CYSLTR2Q9NS75 346 aa5.07□□□□□ -1.6
HMGB1P38-201ENST00000490557 TAS2R10Q9NYW0 307 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms