RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 KRT13P13646 458 aa13.87□□□□□ -0.19
EXOSC3-207ENST00000490516 DNA2P51530 1060 aa13.87□□□□□ -0.19
EXOSC3-207ENST00000490516 SRP54P61011 504 aaKnown RBP13.87□□□□□ -0.19
EXOSC3-207ENST00000490516 AUHQ13825 339 aaKnown RBP13.87□□□□□ -0.19
EXOSC3-207ENST00000490516 HLTFQ14527 1009 aaKnown RBP eCLIP13.87□□□□□ -0.19
EXOSC3-207ENST00000490516 LRRC73Q5JTD7 316 aa13.87□□□□□ -0.19
EXOSC3-207ENST00000490516 ANKS6Q68DC2 871 aa13.87□□□□□ -0.19
EXOSC3-207ENST00000490516 GRAMD1CQ8IYS0 662 aa13.87□□□□□ -0.19
EXOSC3-207ENST00000490516 NLGN4XQ8N0W4 816 aa13.87□□□□□ -0.19
EXOSC3-207ENST00000490516 TP53I13Q8NBR0 393 aaPredicted RBP13.87□□□□□ -0.19
EXOSC3-207ENST00000490516 FBXL13Q8NEE6 735 aa13.87□□□□□ -0.19
EXOSC3-207ENST00000490516 FAM46DQ8NEK8 389 aa13.87□□□□□ -0.19
EXOSC3-207ENST00000490516 NLGN4YQ8NFZ3 816 aaPredicted RBP13.87□□□□□ -0.19
EXOSC3-207ENST00000490516 ZDHHC6Q9H6R6 413 aa13.87□□□□□ -0.19
EXOSC3-207ENST00000490516 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.87□□□□□ -0.19
EXOSC3-207ENST00000490516 OCIAD1Q9NX40 245 aa13.87□□□□□ -0.19
EXOSC3-207ENST00000490516 DKK3Q9UBP4 350 aa13.87□□□□□ -0.19
EXOSC3-207ENST00000490516 SLC12A6Q9UHW9 1150 aa13.87□□□□□ -0.19
EXOSC3-207ENST00000490516 KCTD3Q9Y597 815 aa13.87□□□□□ -0.19
EXOSC3-207ENST00000490516 SYNJ2BP-COX16A0A087WUM0 186 aa13.86□□□□□ -0.19
EXOSC3-207ENST00000490516 A0A0D9SEW6 157 aa13.86□□□□□ -0.19
EXOSC3-207ENST00000490516 NUDT21O43809 227 aaKnown RBP13.86□□□□□ -0.19
EXOSC3-207ENST00000490516 CLDN11O75508 207 aa13.86□□□□□ -0.19
EXOSC3-207ENST00000490516 MPSTP25325 297 aa13.86□□□□□ -0.19
EXOSC3-207ENST00000490516 ALDH4A1P30038 563 aa13.86□□□□□ -0.19
EXOSC3-207ENST00000490516 GKP32189 559 aa13.86□□□□□ -0.19
EXOSC3-207ENST00000490516 CLCN6P51797 869 aa13.86□□□□□ -0.19
EXOSC3-207ENST00000490516 CCNHP51946 323 aaPredicted RBP13.86□□□□□ -0.19
EXOSC3-207ENST00000490516 MC1RQ01726 317 aa13.86□□□□□ -0.19
EXOSC3-207ENST00000490516 EIF4EBP2Q13542 120 aaPredicted RBP13.86□□□□□ -0.19
EXOSC3-207ENST00000490516 CUL2Q13617 745 aa13.86□□□□□ -0.19
EXOSC3-207ENST00000490516 IRF4Q15306 451 aa13.86□□□□□ -0.19
EXOSC3-207ENST00000490516 TIPARPQ7Z3E1 657 aaKnown RBP13.86□□□□□ -0.19
EXOSC3-207ENST00000490516 TAF8Q7Z7C8 310 aa13.86□□□□□ -0.19
EXOSC3-207ENST00000490516 FAM186BQ8IYM0 893 aa13.86□□□□□ -0.19
EXOSC3-207ENST00000490516 NRSN1Q8IZ57 195 aa13.86□□□□□ -0.19
EXOSC3-207ENST00000490516 CCDC112Q8NEF3 446 aa13.86□□□□□ -0.19
EXOSC3-207ENST00000490516 HSFY1Q96LI6 401 aa13.86□□□□□ -0.19
EXOSC3-207ENST00000490516 RBM15Q96T37 977 aaKnown RBP eCLIP13.86□□□□□ -0.19
EXOSC3-207ENST00000490516 EFHD1Q9BUP0 239 aa13.86□□□□□ -0.19
EXOSC3-207ENST00000490516 ASPSCR1Q9BZE9 553 aa13.86□□□□□ -0.19
EXOSC3-207ENST00000490516 SPRY4Q9C004 299 aa13.86□□□□□ -0.19
EXOSC3-207ENST00000490516 INTS2Q9H0H0 1204 aaKnown RBP13.86□□□□□ -0.19
EXOSC3-207ENST00000490516 COX16Q9P0S2 106 aa13.86□□□□□ -0.19
EXOSC3-207ENST00000490516 TLK1Q9UKI8 766 aa13.86□□□□□ -0.19
EXOSC3-207ENST00000490516 MORC2Q9Y6X9 1032 aaPredicted RBP13.86□□□□□ -0.19
EXOSC3-207ENST00000490516 TOR1BO14657 336 aa13.85□□□□□ -0.19
EXOSC3-207ENST00000490516 KLRC4O43908 158 aa13.85□□□□□ -0.19
EXOSC3-207ENST00000490516 RHOCP08134 193 aa13.85□□□□□ -0.19
EXOSC3-207ENST00000490516 NR2F2P24468 414 aa13.85□□□□□ -0.19
EXOSC3-207ENST00000490516 MAP4P27816 1152 aaKnown RBP13.85□□□□□ -0.19
EXOSC3-207ENST00000490516 MXI1P50539 228 aa13.85□□□□□ -0.19
EXOSC3-207ENST00000490516 COPB1P53618 953 aaKnown RBP13.85□□□□□ -0.19
EXOSC3-207ENST00000490516 KLHL40Q2TBA0 621 aa13.85□□□□□ -0.19
EXOSC3-207ENST00000490516 EDRF1Q3B7T1 1238 aa13.85□□□□□ -0.19
EXOSC3-207ENST00000490516 NADK2Q4G0N4 442 aa13.85□□□□□ -0.19
EXOSC3-207ENST00000490516 PRR30Q53SZ7 412 aaPredicted RBP13.85□□□□□ -0.19
EXOSC3-207ENST00000490516 CARD16Q5EG05 197 aa13.85□□□□□ -0.19
EXOSC3-207ENST00000490516 DCAF12Q5T6F0 453 aa13.85□□□□□ -0.19
EXOSC3-207ENST00000490516 FAM129CQ86XR2 697 aa13.85□□□□□ -0.19
EXOSC3-207ENST00000490516 UBR7Q8N806 425 aa13.85□□□□□ -0.19
EXOSC3-207ENST00000490516 AGBL5Q8NDL9 886 aa13.85□□□□□ -0.19
EXOSC3-207ENST00000490516 OR6K2Q8NGY2 324 aa13.85□□□□□ -0.19
EXOSC3-207ENST00000490516 RAB7BQ96AH8 199 aa13.85□□□□□ -0.19
EXOSC3-207ENST00000490516 PDXPQ96GD0 296 aa13.85□□□□□ -0.19
EXOSC3-207ENST00000490516 KLQ9UEF7 1012 aa13.85□□□□□ -0.19
EXOSC3-207ENST00000490516 KIAA1257Q9ULG3 409 aa13.85□□□□□ -0.19
EXOSC3-207ENST00000490516 DOCK4Q8N1I0 1966 aa13.84□□□□□ -0.19
EXOSC3-207ENST00000490516 CALUO43852 315 aaPredicted RBP13.84□□□□□ -0.19
EXOSC3-207ENST00000490516 TM7SF2O76062 418 aa13.84□□□□□ -0.19
EXOSC3-207ENST00000490516 ADCY5O95622 1261 aa13.84□□□□□ -0.19
EXOSC3-207ENST00000490516 FURINP09958 794 aa13.84□□□□□ -0.19
EXOSC3-207ENST00000490516 ITIH2P19823 946 aa13.84□□□□□ -0.19
EXOSC3-207ENST00000490516 BRD2P25440 801 aaKnown RBP13.84□□□□□ -0.19
EXOSC3-207ENST00000490516 CD1CP29017 333 aa13.84□□□□□ -0.19
EXOSC3-207ENST00000490516 GTF2H1P32780 548 aa13.84□□□□□ -0.19
EXOSC3-207ENST00000490516 CSTF2P33240 577 aaKnown RBP eCLIP13.84□□□□□ -0.19
EXOSC3-207ENST00000490516 PEX5P50542 639 aa13.84□□□□□ -0.19
EXOSC3-207ENST00000490516 LIMK2P53671 638 aa13.84□□□□□ -0.19
EXOSC3-207ENST00000490516 CDH4P55283 916 aa13.84□□□□□ -0.19
EXOSC3-207ENST00000490516 MAZP56270 477 aaKnown RBP13.84□□□□□ -0.19
EXOSC3-207ENST00000490516 NFATC4Q14934 902 aa13.84□□□□□ -0.19
EXOSC3-207ENST00000490516 CNGA2Q16280 664 aa13.84□□□□□ -0.19
EXOSC3-207ENST00000490516 ALFQ53S48 1182 aa13.84□□□□□ -0.19
EXOSC3-207ENST00000490516 SPECC1LQ69YQ0 1117 aa13.84□□□□□ -0.19
EXOSC3-207ENST00000490516 BEND5Q7L4P6 421 aa13.84□□□□□ -0.19
EXOSC3-207ENST00000490516 KDELC2Q7Z4H8 507 aa13.84□□□□□ -0.19
EXOSC3-207ENST00000490516 DCAF4L2Q8NA75 395 aa13.84□□□□□ -0.19
EXOSC3-207ENST00000490516 MARVELD3Q96A59 401 aa13.84□□□□□ -0.19
EXOSC3-207ENST00000490516 RTP4Q96DX8 246 aa13.84□□□□□ -0.19
EXOSC3-207ENST00000490516 CTRCQ99895 268 aa13.84□□□□□ -0.19
EXOSC3-207ENST00000490516 DPEP2Q9H4A9 486 aa13.84□□□□□ -0.19
EXOSC3-207ENST00000490516 FAM204AQ9H8W3 233 aa13.84□□□□□ -0.19
EXOSC3-207ENST00000490516 CYP4F12Q9HCS2 524 aa13.84□□□□□ -0.19
EXOSC3-207ENST00000490516 ST7Q9NRC1 585 aa13.84□□□□□ -0.19
EXOSC3-207ENST00000490516 TRAF3IP3Q9Y228 551 aa13.84□□□□□ -0.19
EXOSC3-207ENST00000490516 FCF1Q9Y324 198 aaKnown RBP13.84□□□□□ -0.19
EXOSC3-207ENST00000490516 OR1A2Q9Y585 309 aa13.84□□□□□ -0.19
EXOSC3-207ENST00000490516 ACTL7AQ9Y615 435 aa13.84□□□□□ -0.19
EXOSC3-207ENST00000490516 HS3ST4Q9Y661 456 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms