RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 HS3ST3A1Q9Y663 406 aa19.99■□□□□ 0.79
SMC4-222ENST00000490207 SSU72P8A0A1W2PR75 194 aa19.98■□□□□ 0.79
SMC4-222ENST00000490207 IGLON5A6NGN9 336 aa19.98■□□□□ 0.79
SMC4-222ENST00000490207 AREL1O15033 823 aa19.98■□□□□ 0.79
SMC4-222ENST00000490207 TNFSF14O43557 240 aa19.98■□□□□ 0.79
SMC4-222ENST00000490207 MFAP3LO75121 409 aa19.98■□□□□ 0.79
SMC4-222ENST00000490207 PAK4O96013 591 aaPredicted RBP19.98■□□□□ 0.79
SMC4-222ENST00000490207 H2AFZP0C0S5 128 aa19.98■□□□□ 0.79
SMC4-222ENST00000490207 AMPD1P23109 780 aa19.98■□□□□ 0.79
SMC4-222ENST00000490207 SSR1P43307 286 aaKnown RBP19.98■□□□□ 0.79
SMC4-222ENST00000490207 BNIP3Q12983 259 aa19.98■□□□□ 0.79
SMC4-222ENST00000490207 SGCGQ13326 291 aa19.98■□□□□ 0.79
SMC4-222ENST00000490207 KRT81Q14533 505 aa19.98■□□□□ 0.79
SMC4-222ENST00000490207 RFTN1Q14699 578 aaPredicted RBP19.98■□□□□ 0.79
SMC4-222ENST00000490207 HADHQ16836 314 aaKnown RBP19.98■□□□□ 0.79
SMC4-222ENST00000490207 TSR1Q2NL82 804 aaKnown RBP19.98■□□□□ 0.79
SMC4-222ENST00000490207 TMCO3Q6UWJ1 677 aa19.98■□□□□ 0.79
SMC4-222ENST00000490207 UNQ6494/PRO21346Q6UXR6 183 aa19.98■□□□□ 0.79
SMC4-222ENST00000490207 H2AFVQ71UI9 128 aa19.98■□□□□ 0.79
SMC4-222ENST00000490207 TTC7BQ86TV6 843 aa19.98■□□□□ 0.79
SMC4-222ENST00000490207 DENND6BQ8NEG7 585 aa19.98■□□□□ 0.79
SMC4-222ENST00000490207 PACSIN1Q9BY11 444 aa19.98■□□□□ 0.79
SMC4-222ENST00000490207 ETNK2Q9NVF9 386 aa19.98■□□□□ 0.79
SMC4-222ENST00000490207 UVRAGQ9P2Y5 699 aa19.98■□□□□ 0.79
SMC4-222ENST00000490207 IPO11Q9UI26 975 aaKnown RBP19.98■□□□□ 0.79
SMC4-222ENST00000490207 CEP295Q9C0D2 2601 aa19.98■□□□□ 0.79
SMC4-222ENST00000490207 TSPAN11A1L157 253 aa19.97■□□□□ 0.79
SMC4-222ENST00000490207 RAD51BO15315 384 aa19.97■□□□□ 0.79
SMC4-222ENST00000490207 SDC3O75056 442 aa19.97■□□□□ 0.79
SMC4-222ENST00000490207 XPAP23025 273 aaPredicted RBP19.97■□□□□ 0.79
SMC4-222ENST00000490207 SERPINB6P35237 376 aa19.97■□□□□ 0.79
SMC4-222ENST00000490207 GJC1P36383 396 aa19.97■□□□□ 0.79
SMC4-222ENST00000490207 RGRP47804 291 aa19.97■□□□□ 0.79
SMC4-222ENST00000490207 CDH6P55285 790 aa19.97■□□□□ 0.79
SMC4-222ENST00000490207 ST3GAL2Q16842 350 aa19.97■□□□□ 0.79
SMC4-222ENST00000490207 ASTE1Q2TB18 679 aaPredicted RBP19.97■□□□□ 0.79
SMC4-222ENST00000490207 CFAP58Q5T655 872 aa19.97■□□□□ 0.79
SMC4-222ENST00000490207 KANSL1Q7Z3B3 1105 aa19.97■□□□□ 0.79
SMC4-222ENST00000490207 SRLQ86TD4 932 aa19.97■□□□□ 0.79
SMC4-222ENST00000490207 TP53INP2Q8IXH6 220 aa19.97■□□□□ 0.79
SMC4-222ENST00000490207 SLC22A18ASQ8N1D0 253 aa19.97■□□□□ 0.79
SMC4-222ENST00000490207 EID2Q8N6I1 236 aa19.97■□□□□ 0.79
SMC4-222ENST00000490207 TSEN2Q8NCE0 465 aaKnown RBP19.97■□□□□ 0.79
SMC4-222ENST00000490207 CXorf40AQ8TE69 158 aa19.97■□□□□ 0.79
SMC4-222ENST00000490207 LENG8Q96PV6 779 aaPredicted RBP19.97■□□□□ 0.79
SMC4-222ENST00000490207 TUBGCP5Q96RT8 1024 aa19.97■□□□□ 0.79
SMC4-222ENST00000490207 C1QTNF2Q9BXJ5 285 aa19.97■□□□□ 0.79
SMC4-222ENST00000490207 TMEM121BQ9BXQ6 578 aaPredicted RBP19.97■□□□□ 0.79
SMC4-222ENST00000490207 SUV39H2Q9H5I1 410 aa19.97■□□□□ 0.79
SMC4-222ENST00000490207 MSRB2Q9Y3D2 182 aa19.97■□□□□ 0.79
SMC4-222ENST00000490207 MAP1BP46821 2468 aaKnown RBP19.97■□□□□ 0.79
SMC4-222ENST00000490207 C1QTNF9BB2RNN3 333 aa19.96■□□□□ 0.79
SMC4-222ENST00000490207 FPGTO14772 594 aa19.96■□□□□ 0.79
SMC4-222ENST00000490207 AKR1B10O60218 316 aa19.96■□□□□ 0.79
SMC4-222ENST00000490207 DKK1O94907 266 aa19.96■□□□□ 0.79
SMC4-222ENST00000490207 C1QTNF9P0C862 333 aa19.96■□□□□ 0.79
SMC4-222ENST00000490207 TIMP2P16035 220 aa19.96■□□□□ 0.79
SMC4-222ENST00000490207 CSNK1DP48730 415 aa19.96■□□□□ 0.79
SMC4-222ENST00000490207 ELP6Q0PNE2 266 aa19.96■□□□□ 0.79
SMC4-222ENST00000490207 TMCO4Q5TGY1 634 aa19.96■□□□□ 0.79
SMC4-222ENST00000490207 Q6ZSR6 202 aa19.96■□□□□ 0.79
SMC4-222ENST00000490207 HCAR2Q8TDS4 363 aa19.96■□□□□ 0.79
SMC4-222ENST00000490207 ASB12Q8WXK4 309 aa19.96■□□□□ 0.79
SMC4-222ENST00000490207 TSC1Q92574 1164 aa19.96■□□□□ 0.79
SMC4-222ENST00000490207 GATA6Q92908 595 aa19.96■□□□□ 0.79
SMC4-222ENST00000490207 CNDP2Q96KP4 475 aaKnown RBP19.96■□□□□ 0.79
SMC4-222ENST00000490207 BMFQ96LC9 184 aa19.96■□□□□ 0.79
SMC4-222ENST00000490207 ZNF641Q96N77 438 aaPredicted RBP19.96■□□□□ 0.79
SMC4-222ENST00000490207 KLF6Q99612 283 aaPredicted RBP19.96■□□□□ 0.79
SMC4-222ENST00000490207 GPR27Q9NS67 375 aa19.96■□□□□ 0.79
SMC4-222ENST00000490207 KLHL11Q9NVR0 708 aa19.96■□□□□ 0.79
SMC4-222ENST00000490207 RCOR3Q9P2K3 495 aaPredicted RBP19.96■□□□□ 0.79
SMC4-222ENST00000490207 TDRD6O60522 2096 aaKnown RBP19.96■□□□□ 0.79
SMC4-222ENST00000490207 FRYQ5TBA9 3013 aa19.95■□□□□ 0.78
SMC4-222ENST00000490207 POM121BA6NF01 834 aa19.95■□□□□ 0.78
SMC4-222ENST00000490207 ENC1O14682 589 aa19.95■□□□□ 0.78
SMC4-222ENST00000490207 PROSCO94903 275 aa19.95■□□□□ 0.78
SMC4-222ENST00000490207 LDOC1O95751 146 aaPredicted RBP19.95■□□□□ 0.78
SMC4-222ENST00000490207 ITIH2P19823 946 aa19.95■□□□□ 0.78
SMC4-222ENST00000490207 SERPINA4P29622 427 aa19.95■□□□□ 0.78
SMC4-222ENST00000490207 RABIFP47224 123 aa19.95■□□□□ 0.78
SMC4-222ENST00000490207 SUOXP51687 545 aa19.95■□□□□ 0.78
SMC4-222ENST00000490207 ADKP55263 362 aaKnown RBP19.95■□□□□ 0.78
SMC4-222ENST00000490207 ZNF235Q14590 738 aa19.95■□□□□ 0.78
SMC4-222ENST00000490207 LBRQ14739 615 aaKnown RBP19.95■□□□□ 0.78
SMC4-222ENST00000490207 BRAT1Q6PJG6 821 aa19.95■□□□□ 0.78
SMC4-222ENST00000490207 CPNE8Q86YQ8 564 aa19.95■□□□□ 0.78
SMC4-222ENST00000490207 DCP2Q8IU60 420 aaKnown RBP19.95■□□□□ 0.78
SMC4-222ENST00000490207 ATPAF2Q8N5M1 289 aa19.95■□□□□ 0.78
SMC4-222ENST00000490207 ZNF599Q96NL3 588 aa19.95■□□□□ 0.78
SMC4-222ENST00000490207 WRAP53Q9BUR4 548 aaKnown RBP19.95■□□□□ 0.78
SMC4-222ENST00000490207 ATP13A3Q9H7F0 1226 aa19.95■□□□□ 0.78
SMC4-222ENST00000490207 SEPT3Q9UH03 358 aa19.95■□□□□ 0.78
SMC4-222ENST00000490207 LCMT1Q9UIC8 334 aa19.95■□□□□ 0.78
SMC4-222ENST00000490207 SPEGQ15772 3267 aa19.94■□□□□ 0.78
SMC4-222ENST00000490207 PLXNB3Q9ULL4 1909 aa19.94■□□□□ 0.78
SMC4-222ENST00000490207 FAM221BA6H8Z2 402 aa19.94■□□□□ 0.78
SMC4-222ENST00000490207 BUB1BO60566 1050 aaPredicted RBP19.94■□□□□ 0.78
SMC4-222ENST00000490207 MMP20O60882 483 aa19.94■□□□□ 0.78
SMC4-222ENST00000490207 TM7SF2O76062 418 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms