RNA–Protein interactions for RNA: ENST00000490175.5

SNX5-214, Transcript of sorting nexin 5, humanhuman

TSL 1 (best)

Gene SNX5, Length 2,025 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-214ENST00000490175 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.23■□□□□ 0.19
SNX5-214ENST00000490175 SLC41A1Q8IVJ1 513 aa16.23■□□□□ 0.19
SNX5-214ENST00000490175 ZNF461Q8TAF7 563 aa16.23■□□□□ 0.19
SNX5-214ENST00000490175 MYEOVQ96EZ4 313 aa16.23■□□□□ 0.19
SNX5-214ENST00000490175 FEM1CQ96JP0 617 aa16.23■□□□□ 0.19
SNX5-214ENST00000490175 PPP1R12CQ9BZL4 782 aa16.23■□□□□ 0.19
SNX5-214ENST00000490175 APOBEC2Q9Y235 224 aaKnown RBP16.23■□□□□ 0.19
SNX5-214ENST00000490175 PHGDHO43175 533 aaKnown RBP16.23■□□□□ 0.19
SNX5-214ENST00000490175 UPP2O95045 317 aa16.23■□□□□ 0.19
SNX5-214ENST00000490175 RPL17P18621 184 aaKnown RBP16.23■□□□□ 0.19
SNX5-214ENST00000490175 HLA-DPA1P20036 260 aa16.23■□□□□ 0.19
SNX5-214ENST00000490175 KPNA2P52292 529 aaKnown RBP16.23■□□□□ 0.19
SNX5-214ENST00000490175 ATN1P54259 1190 aaPredicted RBP16.23■□□□□ 0.19
SNX5-214ENST00000490175 SIRPB2Q5JXA9 342 aa16.23■□□□□ 0.19
SNX5-214ENST00000490175 STYXQ8WUJ0 223 aa16.23■□□□□ 0.19
SNX5-214ENST00000490175 SEMA3CQ99985 751 aa16.23■□□□□ 0.19
SNX5-214ENST00000490175 CLSTN3Q9BQT9 956 aa16.23■□□□□ 0.19
SNX5-214ENST00000490175 RNF208Q9H0X6 261 aa16.23■□□□□ 0.19
SNX5-214ENST00000490175 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.23■□□□□ 0.195e-55■□□□□ 9.4
SNX5-214ENST00000490175 TRPM5Q9NZQ8 1165 aa16.23■□□□□ 0.19
SNX5-214ENST00000490175 BRCA2P51587 3418 aa16.22■□□□□ 0.19
SNX5-214ENST00000490175 A8MUI8 341 aa16.22■□□□□ 0.19
SNX5-214ENST00000490175 GYG2O15488 501 aa16.22■□□□□ 0.19
SNX5-214ENST00000490175 CLDN11O75508 207 aa16.22■□□□□ 0.19
SNX5-214ENST00000490175 KLHL2O95198 593 aa16.22■□□□□ 0.19
SNX5-214ENST00000490175 HSPA4LO95757 839 aa16.22■□□□□ 0.19
SNX5-214ENST00000490175 SOD2P04179 222 aa16.22■□□□□ 0.19
SNX5-214ENST00000490175 FGF1P05230 155 aa16.22■□□□□ 0.19
SNX5-214ENST00000490175 ATXN1LP0C7T5 689 aaKnown RBP16.22■□□□□ 0.19
SNX5-214ENST00000490175 CCL5P13501 91 aa16.22■□□□□ 0.19
SNX5-214ENST00000490175 HMGA1P17096 107 aaKnown RBP16.22■□□□□ 0.19
SNX5-214ENST00000490175 SAT1P21673 171 aa16.22■□□□□ 0.19
SNX5-214ENST00000490175 SLC6A4P31645 630 aa16.22■□□□□ 0.19
SNX5-214ENST00000490175 ETFBP38117 255 aa16.22■□□□□ 0.19
SNX5-214ENST00000490175 LEPRP48357 1165 aaKnown RBP16.22■□□□□ 0.19
SNX5-214ENST00000490175 CLCN5P51795 746 aa16.22■□□□□ 0.19
SNX5-214ENST00000490175 HK2P52789 917 aa16.22■□□□□ 0.19
SNX5-214ENST00000490175 GNA12Q03113 381 aa16.22■□□□□ 0.19
SNX5-214ENST00000490175 TUBB3Q13509 450 aa16.22■□□□□ 0.19
SNX5-214ENST00000490175 IHHQ14623 411 aa16.22■□□□□ 0.19
SNX5-214ENST00000490175 WASHC2DQ5SRD0 308 aa16.22■□□□□ 0.19
SNX5-214ENST00000490175 LIPMQ5VYY2 423 aa16.22■□□□□ 0.19
SNX5-214ENST00000490175 CENPLQ8N0S6 344 aaPredicted RBP16.22■□□□□ 0.19
SNX5-214ENST00000490175 TMEM151AQ8N4L1 468 aa16.22■□□□□ 0.19
SNX5-214ENST00000490175 FAM13CQ8NE31 585 aa16.22■□□□□ 0.19
SNX5-214ENST00000490175 IFT43Q96FT9 208 aa16.22■□□□□ 0.19
SNX5-214ENST00000490175 TRMT2BQ96GJ1 504 aaKnown RBP16.22■□□□□ 0.19
SNX5-214ENST00000490175 ANKRD27Q96NW4 1050 aa16.22■□□□□ 0.19
SNX5-214ENST00000490175 EBF4Q9BQW3 602 aa16.22■□□□□ 0.19
SNX5-214ENST00000490175 CCDC106Q9BWC9 280 aa16.22■□□□□ 0.19
SNX5-214ENST00000490175 MMADHCQ9H3L0 296 aaPredicted RBP16.22■□□□□ 0.19
SNX5-214ENST00000490175 ARMCX1Q9P291 453 aa16.22■□□□□ 0.19
SNX5-214ENST00000490175 RUVBL2Q9Y230 463 aaKnown RBP16.22■□□□□ 0.19
SNX5-214ENST00000490175 COCHO43405 550 aa16.21■□□□□ 0.19
SNX5-214ENST00000490175 ARRB2P32121 409 aa16.21■□□□□ 0.19
SNX5-214ENST00000490175 PPP3CCP48454 512 aa16.21■□□□□ 0.19
SNX5-214ENST00000490175 SLC12A2P55011 1212 aa16.21■□□□□ 0.19
SNX5-214ENST00000490175 TLE2Q04725 743 aa16.21■□□□□ 0.19
SNX5-214ENST00000490175 ASPHQ12797 758 aa16.21■□□□□ 0.19
SNX5-214ENST00000490175 C1orf53Q5VUE5 145 aa16.21■□□□□ 0.19
SNX5-214ENST00000490175 LRRC8EQ6NSJ5 796 aa16.21■□□□□ 0.19
SNX5-214ENST00000490175 MFSD6LQ8IWD5 586 aa16.21■□□□□ 0.19
SNX5-214ENST00000490175 OR13J1Q8NGT2 312 aa16.21■□□□□ 0.19
SNX5-214ENST00000490175 KCTD4Q8WVF5 259 aa16.21■□□□□ 0.19
SNX5-214ENST00000490175 ELMO2Q96JJ3 720 aa16.21■□□□□ 0.19
SNX5-214ENST00000490175 MIPEPQ99797 713 aa16.21■□□□□ 0.19
SNX5-214ENST00000490175 CADM1Q9BY67 442 aaKnown RBP16.21■□□□□ 0.19
SNX5-214ENST00000490175 MFSD1Q9H3U5 465 aa16.21■□□□□ 0.19
SNX5-214ENST00000490175 PNPOQ9NVS9 261 aa16.21■□□□□ 0.19
SNX5-214ENST00000490175 TAGLN3Q9UI15 199 aa16.21■□□□□ 0.19
SNX5-214ENST00000490175 SUFUQ9UMX1 484 aa16.21■□□□□ 0.19
SNX5-214ENST00000490175 ZFP37Q9Y6Q3 630 aaPredicted RBP16.21■□□□□ 0.19
SNX5-214ENST00000490175 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.21■□□□□ 0.18
SNX5-214ENST00000490175 TARM1B6A8C7 271 aa16.21■□□□□ 0.18
SNX5-214ENST00000490175 ZNF195O14628 629 aa16.21■□□□□ 0.18
SNX5-214ENST00000490175 GSC2O15499 205 aa16.21■□□□□ 0.18
SNX5-214ENST00000490175 GJB5O95377 273 aa16.21■□□□□ 0.18
SNX5-214ENST00000490175 SEC24AO95486 1093 aa16.21■□□□□ 0.18
SNX5-214ENST00000490175 AOC1P19801 751 aa16.21■□□□□ 0.18
SNX5-214ENST00000490175 HOXD9P28356 352 aaPredicted RBP16.21■□□□□ 0.18
SNX5-214ENST00000490175 ALDH1A3P47895 512 aa16.21■□□□□ 0.18
SNX5-214ENST00000490175 IDH3AP50213 366 aa16.21■□□□□ 0.18
SNX5-214ENST00000490175 DSG1Q02413 1049 aa16.21■□□□□ 0.18
SNX5-214ENST00000490175 RFTN1Q14699 578 aaPredicted RBP16.21■□□□□ 0.18
SNX5-214ENST00000490175 NAA25Q14CX7 972 aa16.21■□□□□ 0.18
SNX5-214ENST00000490175 RFWD3Q6PCD5 774 aa16.21■□□□□ 0.18
SNX5-214ENST00000490175 NAPRTQ6XQN6 538 aa16.21■□□□□ 0.18
SNX5-214ENST00000490175 CHST9Q7L1S5 443 aa16.21■□□□□ 0.18
SNX5-214ENST00000490175 CEP97Q8IW35 865 aa16.21■□□□□ 0.18
SNX5-214ENST00000490175 CFAP52Q8N1V2 620 aa16.21■□□□□ 0.18
SNX5-214ENST00000490175 TSPAN17Q96FV3 270 aa16.21■□□□□ 0.18
SNX5-214ENST00000490175 SCYL1Q96KG9 808 aa16.21■□□□□ 0.18
SNX5-214ENST00000490175 CDH19Q9H159 772 aa16.21■□□□□ 0.18
SNX5-214ENST00000490175 TAS2R1Q9NYW7 299 aa16.21■□□□□ 0.18
SNX5-214ENST00000490175 CPSF2Q9P2I0 782 aaKnown RBP16.21■□□□□ 0.18
SNX5-214ENST00000490175 SEPT3Q9UH03 358 aa16.21■□□□□ 0.18
SNX5-214ENST00000490175 RIMKLBQ9ULI2 386 aa16.21■□□□□ 0.18
SNX5-214ENST00000490175 ILVBLA1L0T0 632 aa16.2■□□□□ 0.18
SNX5-214ENST00000490175 CARNS1A5YM72 827 aa16.2■□□□□ 0.18
SNX5-214ENST00000490175 H3BNC9 293 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms