RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, human

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRM-206	ENST00000490101	SPACA7	Q96KW9	195 aa		18.43	■□□□□ 0.54
SRM-206	ENST00000490101	RAB6B	Q9NRW1	208 aa		18.43	■□□□□ 0.54
SRM-206	ENST00000490101	KLHL8	Q9P2G9	620 aa	Predicted RBP	18.43	■□□□□ 0.54
SRM-206	ENST00000490101	ANAPC5	Q9UJX4	755 aa		18.43	■□□□□ 0.54
SRM-206	ENST00000490101	NFU1	Q9UMS0	254 aa		18.43	■□□□□ 0.54
SRM-206	ENST00000490101	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		18.42	■□□□□ 0.54
SRM-206	ENST00000490101	CXorf51A	A0A1B0GTR3	108 aa		18.42	■□□□□ 0.54
SRM-206	ENST00000490101	CCDC151	A5D8V7	595 aa		18.42	■□□□□ 0.54
SRM-206	ENST00000490101	SMAP	O00193	183 aa		18.42	■□□□□ 0.54
SRM-206	ENST00000490101	DYNC1I1	O14576	645 aa		18.42	■□□□□ 0.54
SRM-206	ENST00000490101	KHNYN	O15037	678 aa	Known RBP	18.42	■□□□□ 0.54
SRM-206	ENST00000490101	ZBTB24	O43167	697 aa	Predicted RBP	18.42	■□□□□ 0.54
SRM-206	ENST00000490101	CACNG3	O60359	315 aa		18.42	■□□□□ 0.54
SRM-206	ENST00000490101	KCNK5	O95279	499 aa		18.42	■□□□□ 0.54
SRM-206	ENST00000490101	METTL18	O95568	372 aa		18.42	■□□□□ 0.54
SRM-206	ENST00000490101	MYBL2	P10244	700 aa		18.42	■□□□□ 0.54
SRM-206	ENST00000490101	ECHS1	P30084	290 aa		18.42	■□□□□ 0.54
SRM-206	ENST00000490101	P2RY2	P41231	377 aa		18.42	■□□□□ 0.54
SRM-206	ENST00000490101	ITGA8	P53708	1063 aa		18.42	■□□□□ 0.54
SRM-206	ENST00000490101	PLTP	P55058	493 aa		18.42	■□□□□ 0.54
SRM-206	ENST00000490101	HLTF	Q14527	1009 aa	Known RBP eCLIP	18.42	■□□□□ 0.54
SRM-206	ENST00000490101	RFTN1	Q14699	578 aa	Predicted RBP	18.42	■□□□□ 0.54
SRM-206	ENST00000490101	MORF4L2	Q15014	288 aa		18.42	■□□□□ 0.54
SRM-206	ENST00000490101	RNASEH2B	Q5TBB1	312 aa	Known RBP	18.42	■□□□□ 0.54
SRM-206	ENST00000490101	MARC1	Q5VT66	337 aa		18.42	■□□□□ 0.54
SRM-206	ENST00000490101	ITPRIPL1	Q6GPH6	555 aa		18.42	■□□□□ 0.54
SRM-206	ENST00000490101	PSAPL1	Q6NUJ1	521 aa		18.42	■□□□□ 0.54
SRM-206	ENST00000490101	HIBCH	Q6NVY1	386 aa	Predicted RBP	18.42	■□□□□ 0.54
SRM-206	ENST00000490101	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	18.42	■□□□□ 0.54
SRM-206	ENST00000490101	PPIL6	Q8IXY8	311 aa		18.42	■□□□□ 0.54
SRM-206	ENST00000490101	TMEFF1	Q8IYR6	380 aa		18.42	■□□□□ 0.54
SRM-206	ENST00000490101	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	18.42	■□□□□ 0.54
SRM-206	ENST00000490101	TERB1	Q8NA31	727 aa		18.42	■□□□□ 0.54
SRM-206	ENST00000490101	CPT1B	Q92523	772 aa		18.42	■□□□□ 0.54
SRM-206	ENST00000490101	ERLEC1	Q96DZ1	483 aa		18.42	■□□□□ 0.54
SRM-206	ENST00000490101	C2orf49	Q9BVC5	232 aa	Predicted RBP	18.42	■□□□□ 0.54
SRM-206	ENST00000490101	CEP41	Q9BYV8	373 aa		18.42	■□□□□ 0.54
SRM-206	ENST00000490101	DNAJC17	Q9NVM6	304 aa	Known RBP	18.42	■□□□□ 0.54
SRM-206	ENST00000490101	RBM22	Q9NW64	420 aa	Known RBP eCLIP	18.42	■□□□□ 0.54
SRM-206	ENST00000490101	VPS28	Q9UK41	221 aa		18.42	■□□□□ 0.54
SRM-206	ENST00000490101	FARP1	Q9Y4F1	1045 aa	Predicted RBP	18.42	■□□□□ 0.54
SRM-206	ENST00000490101	FRY	Q5TBA9	3013 aa		18.42	■□□□□ 0.54
SRM-206	ENST00000490101	KRT37	O76014	449 aa		18.41	■□□□□ 0.54
SRM-206	ENST00000490101	H2AFX	P16104	143 aa	Predicted RBP	18.41	■□□□□ 0.54
SRM-206	ENST00000490101	CD70	P32970	193 aa		18.41	■□□□□ 0.54
SRM-206	ENST00000490101	CD68	P34810	354 aa	Predicted RBP	18.41	■□□□□ 0.54
SRM-206	ENST00000490101	SEMA5A	Q13591	1074 aa		18.41	■□□□□ 0.54
SRM-206	ENST00000490101	LBR	Q14739	615 aa	Known RBP	18.41	■□□□□ 0.54
SRM-206	ENST00000490101	PLEKHG6	Q3KR16	790 aa		18.41	■□□□□ 0.54
SRM-206	ENST00000490101	PREPL	Q4J6C6	727 aa	Predicted RBP	18.41	■□□□□ 0.54
SRM-206	ENST00000490101	GRAMD4	Q6IC98	578 aa		18.41	■□□□□ 0.54
SRM-206	ENST00000490101	NUDT18	Q6ZVK8	323 aa		18.41	■□□□□ 0.54
SRM-206	ENST00000490101	LPCAT2	Q7L5N7	544 aa		18.41	■□□□□ 0.54
SRM-206	ENST00000490101	HOOK3	Q86VS8	718 aa		18.41	■□□□□ 0.54
SRM-206	ENST00000490101	FBXO25	Q8TCJ0	367 aa		18.41	■□□□□ 0.54
SRM-206	ENST00000490101	AGAP3	Q96P47	875 aa		18.41	■□□□□ 0.54
SRM-206	ENST00000490101	GBA3	Q9H227	469 aa		18.41	■□□□□ 0.54
SRM-206	ENST00000490101	NEUROG2	Q9H2A3	272 aa		18.41	■□□□□ 0.54
SRM-206	ENST00000490101	ETNK1	Q9HBU6	452 aa		18.41	■□□□□ 0.54
SRM-206	ENST00000490101	GLOD4	Q9HC38	313 aa		18.41	■□□□□ 0.54
SRM-206	ENST00000490101	ABCB8	Q9NUT2	735 aa		18.41	■□□□□ 0.54
SRM-206	ENST00000490101	UBA2	Q9UBT2	640 aa	Predicted RBP	18.41	■□□□□ 0.54
SRM-206	ENST00000490101	ANGPTL2	Q9UKU9	493 aa		18.41	■□□□□ 0.54
SRM-206	ENST00000490101	INTS6	Q9UL03	887 aa	Known RBP	18.41	■□□□□ 0.54
SRM-206	ENST00000490101	SHOC2	Q9UQ13	582 aa		18.41	■□□□□ 0.54
SRM-206	ENST00000490101	ATP8A1	Q9Y2Q0	1164 aa		18.41	■□□□□ 0.54
SRM-206	ENST00000490101	MYO18A	Q92614	2054 aa	Known RBP	18.41	■□□□□ 0.54
SRM-206	ENST00000490101	CBX4	O00257	560 aa		18.4	■□□□□ 0.54
SRM-206	ENST00000490101	ERLIN1	O75477	346 aa		18.4	■□□□□ 0.54
SRM-206	ENST00000490101	HOXB2	P14652	356 aa		18.4	■□□□□ 0.54
SRM-206	ENST00000490101	GLDC	P23378	1020 aa		18.4	■□□□□ 0.54
SRM-206	ENST00000490101	HLA-F	P30511	346 aa		18.4	■□□□□ 0.54
SRM-206	ENST00000490101	SLC10A7	Q0GE19	358 aa		18.4	■□□□□ 0.54
SRM-206	ENST00000490101	KCNJ11	Q14654	390 aa		18.4	■□□□□ 0.54
SRM-206	ENST00000490101	ST3GAL2	Q16842	350 aa		18.4	■□□□□ 0.54
SRM-206	ENST00000490101	INO80D	Q53TQ3	878 aa	Predicted RBP	18.4	■□□□□ 0.54
SRM-206	ENST00000490101	FAM182A	Q5T1J6	154 aa		18.4	■□□□□ 0.54
SRM-206	ENST00000490101	TRMT11	Q7Z4G4	463 aa	Known RBP	18.4	■□□□□ 0.54
SRM-206	ENST00000490101	KLHDC8B	Q8IXV7	354 aa		18.4	■□□□□ 0.54
SRM-206	ENST00000490101	APCDD1	Q8J025	514 aa		18.4	■□□□□ 0.54
SRM-206	ENST00000490101	NAT8L	Q8N9F0	302 aa		18.4	■□□□□ 0.54
SRM-206	ENST00000490101	HNRNPLL	Q8WVV9	542 aa	Known RBP	18.4	■□□□□ 0.54
SRM-206	ENST00000490101	ANKRD7	Q92527	254 aa		18.4	■□□□□ 0.54
SRM-206	ENST00000490101	ZNF419	Q96HQ0	510 aa	Predicted RBP	18.4	■□□□□ 0.54
SRM-206	ENST00000490101	XPO6	Q96QU8	1125 aa	Known RBP	18.4	■□□□□ 0.54
SRM-206	ENST00000490101	FOXP3	Q9BZS1	431 aa		18.4	■□□□□ 0.54
SRM-206	ENST00000490101	TMEM9B	Q9NQ34	198 aa		18.4	■□□□□ 0.54
SRM-206	ENST00000490101	VPS51	Q9UID3	782 aa		18.4	■□□□□ 0.54
SRM-206	ENST00000490101	MBD1	Q9UIS9	605 aa	Predicted RBP	18.4	■□□□□ 0.54
SRM-206	ENST00000490101	GGA2	Q9UJY4	613 aa		18.4	■□□□□ 0.54
SRM-206	ENST00000490101	ATXN2	Q99700	1313 aa	Known RBP	18.4	■□□□□ 0.54
SRM-206	ENST00000490101	GIPC1	O14908	333 aa		18.39	■□□□□ 0.53
SRM-206	ENST00000490101	SNAP91	O60641	907 aa		18.39	■□□□□ 0.53
SRM-206	ENST00000490101	NEBL	O76041	1014 aa		18.39	■□□□□ 0.53
SRM-206	ENST00000490101	CISD3	P0C7P0	127 aa		18.39	■□□□□ 0.53
SRM-206	ENST00000490101	PABPC1	P11940	636 aa	Known RBP	18.39	■□□□□ 0.53
SRM-206	ENST00000490101	NFKB1	P19838	968 aa		18.39	■□□□□ 0.53
SRM-206	ENST00000490101	PSMB4	P28070	264 aa		18.39	■□□□□ 0.53
SRM-206	ENST00000490101	PTGER3	P43115	390 aa		18.39	■□□□□ 0.53
SRM-206	ENST00000490101	MMP13	P45452	471 aa		18.39	■□□□□ 0.53

Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms