RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 SLC12A2P55011 1212 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 HNRNPH2P55795 449 aaKnown RBP6.44□□□□□ -1.38
SF3A3-208ENST00000489537 RPL26P61254 145 aaKnown RBP6.44□□□□□ -1.38
SF3A3-208ENST00000489537 DEFB103AP81534 67 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 HTRA4P83105 476 aaPredicted RBP6.44□□□□□ -1.38
SF3A3-208ENST00000489537 FOXK2Q01167 660 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 GNA12Q03113 381 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 NSUN2Q08J23 767 aaKnown RBP eCLIP6.44□□□□□ -1.38
SF3A3-208ENST00000489537 NIPAL4Q0D2K0 466 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 CCDC15Q0P6D6 951 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 USP4Q13107 963 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 THOC5Q13769 683 aaKnown RBP6.44□□□□□ -1.38
SF3A3-208ENST00000489537 LBRQ14739 615 aaKnown RBP6.44□□□□□ -1.38
SF3A3-208ENST00000489537 GRM3Q14832 879 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 E2F5Q15329 346 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 TSNAXIP1Q2TAA8 658 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 ANKRD20A4Q4UJ75 823 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 ARHGAP15Q53QZ3 475 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 PIK3R6Q5UE93 754 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 RNF43Q68DV7 783 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 ALG1LQ6GMV1 187 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 KIAA0930Q6ICG6 404 aaPredicted RBP6.44□□□□□ -1.38
SF3A3-208ENST00000489537 RETSATQ6NUM9 610 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 PKN3Q6P5Z2 889 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 PRSS55Q6UWB4 352 aaPredicted RBP6.44□□□□□ -1.38
SF3A3-208ENST00000489537 RANBP10Q6VN20 620 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 PACS1Q6VY07 963 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 CAPN12Q6ZSI9 719 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 ZNF534Q76KX8 674 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 SPATA21Q7Z572 469 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 PRUNE1Q86TP1 453 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 KCNMB4Q86W47 210 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 RASSF3Q86WH2 238 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 CNTN4Q8IWV2 1026 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 ARHGAP12Q8IWW6 846 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 ZNF683Q8IZ20 524 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 LGI2Q8N0V4 545 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 NDUFAF2Q8N183 169 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 PGBD3Q8N328 593 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 NPWQ8N729 165 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 PPP1R14CQ8TAE6 165 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 MDM1Q8TC05 714 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 PPP4R1Q8TF05 950 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 CLP1Q92989 425 aaKnown RBP6.44□□□□□ -1.38
SF3A3-208ENST00000489537 ISL2Q96A47 359 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 ACDQ96AP0 544 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 ZNF669Q96BR6 464 aaPredicted RBP6.44□□□□□ -1.38
SF3A3-208ENST00000489537 OTUB2Q96DC9 234 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 CCDC126Q96EE4 140 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 IFT43Q96FT9 208 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 IMP4Q96G21 291 aaKnown RBP6.44□□□□□ -1.38
SF3A3-208ENST00000489537 FEM1CQ96JP0 617 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 PWWP2AQ96N64 755 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 TTC1Q99614 292 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 PAIP2Q9BPZ3 127 aaKnown RBP6.44□□□□□ -1.38
SF3A3-208ENST00000489537 CLSTN3Q9BQT9 956 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 C2orf49Q9BVC5 232 aaPredicted RBP6.44□□□□□ -1.38
SF3A3-208ENST00000489537 ADGRE3Q9BY15 652 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 TRIM55Q9BYV6 548 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 RHOJQ9H4E5 214 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 MANSC1Q9H8J5 431 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 UBA2Q9UBT2 640 aaPredicted RBP6.44□□□□□ -1.38
SF3A3-208ENST00000489537 RAPGEFL1Q9UHV5 662 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 TLK1Q9UKI8 766 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 RPL26L1Q9UNX3 145 aaKnown RBP6.44□□□□□ -1.38
SF3A3-208ENST00000489537 DOLKQ9UPQ8 538 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 SORCS3Q9UPU3 1222 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 NEU3Q9UQ49 428 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 TBC1D30Q9Y2I9 924 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 PLLPQ9Y342 182 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 INSL5Q9Y5Q6 135 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 USH1CQ9Y6N9 552 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 TANC1Q9C0D5 1861 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 PATJQ8NI35 1801 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 BRWD1Q9NSI6 2320 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 A0A087X1B8 175 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 TRAV19A0A0A6YYK7 116 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 GOLGA8QA0A0J9YX86 632 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 GOLGA8OA6NCC3 632 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 CFAP73A6NFT4 308 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 CCT8L1PA6NM43 557 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 NT5C1B-RDH14C9J2C7 533 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 F8W810 466 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 GOLGA8NF8WBI6 632 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 H0YHG0 523 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 ZNF197O14709 1029 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 SLC9A3R1O14745 358 aaPredicted RBP6.43□□□□□ -1.38
SF3A3-208ENST00000489537 SLC7A4O43246 635 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 KDELR3O43731 214 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 AVILO75366 819 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 FGF18O76093 207 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 GJB5O95377 273 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 MAP3K6O95382 1288 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 OAS1P00973 400 aaKnown RBP6.43□□□□□ -1.38
SF3A3-208ENST00000489537 IGHA1P01876 353 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 CA3P07451 260 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 RHOCP08134 193 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 ITGA2BP08514 1039 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 DHRS4L1P0CG22 281 aa6.43□□□□□ -1.38
SF3A3-208ENST00000489537 MYL4P12829 197 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms