RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 GDF7Q7Z4P5 450 aa15.25■□□□□ 0.03
UFD1-209ENST00000489406 SCML4Q8N228 414 aa15.25■□□□□ 0.03
UFD1-209ENST00000489406 CLEC4CQ8WTT0 213 aa15.25■□□□□ 0.03
UFD1-209ENST00000489406 RBM15Q96T37 977 aaKnown RBP eCLIP15.25■□□□□ 0.034e-6■□□□□ 8.2
UFD1-209ENST00000489406 TRIT1Q9H3H1 467 aaKnown RBP15.25■□□□□ 0.03
UFD1-209ENST00000489406 DPEP2Q9H4A9 486 aa15.25■□□□□ 0.03
UFD1-209ENST00000489406 MRPL40Q9NQ50 206 aaKnown RBP15.25■□□□□ 0.03
UFD1-209ENST00000489406 RCOR3Q9P2K3 495 aaPredicted RBP15.25■□□□□ 0.03
UFD1-209ENST00000489406 RPS6KL1Q9Y6S9 549 aa15.25■□□□□ 0.03
UFD1-209ENST00000489406 DIDO1Q9BTC0 2240 aaKnown RBP15.24■□□□□ 0.03
UFD1-209ENST00000489406 TOR1BO14657 336 aa15.24■□□□□ 0.03
UFD1-209ENST00000489406 GABBR2O75899 941 aa15.24■□□□□ 0.03
UFD1-209ENST00000489406 BMP15O95972 392 aa15.24■□□□□ 0.03
UFD1-209ENST00000489406 ATXN8OSP0DMR3 200 aa15.24■□□□□ 0.03
UFD1-209ENST00000489406 VARSP26640 1264 aaKnown RBP15.24■□□□□ 0.03
UFD1-209ENST00000489406 DLSTP36957 453 aa15.24■□□□□ 0.03
UFD1-209ENST00000489406 RGS7P49802 495 aa15.24■□□□□ 0.03
UFD1-209ENST00000489406 CLPPQ16740 277 aaPredicted RBP15.24■□□□□ 0.03
UFD1-209ENST00000489406 FAM26FQ5R3K3 315 aa15.24■□□□□ 0.03
UFD1-209ENST00000489406 KCTD16Q68DU8 428 aa15.24■□□□□ 0.03
UFD1-209ENST00000489406 LINGO4Q6UY18 593 aa15.24■□□□□ 0.03
UFD1-209ENST00000489406 CCDC73Q6ZRK6 1079 aa15.24■□□□□ 0.03
UFD1-209ENST00000489406 BMPERQ8N8U9 685 aa15.24■□□□□ 0.03
UFD1-209ENST00000489406 IRGQQ8WZA9 623 aa15.24■□□□□ 0.03
UFD1-209ENST00000489406 SLC25A23Q9BV35 468 aa15.24■□□□□ 0.03
UFD1-209ENST00000489406 CISHQ9NSE2 258 aa15.24■□□□□ 0.03
UFD1-209ENST00000489406 HESX1Q9UBX0 185 aa15.24■□□□□ 0.03
UFD1-209ENST00000489406 TMEM184BQ9Y519 407 aaPredicted RBP15.24■□□□□ 0.03
UFD1-209ENST00000489406 A6NCN8 305 aa15.23■□□□□ 0.03
UFD1-209ENST00000489406 ANKUB1A6NFN9 424 aa15.23■□□□□ 0.03
UFD1-209ENST00000489406 INPP4BO15327 924 aa15.23■□□□□ 0.03
UFD1-209ENST00000489406 KATNA1O75449 491 aa15.23■□□□□ 0.03
UFD1-209ENST00000489406 TNFP01375 233 aa15.23■□□□□ 0.03
UFD1-209ENST00000489406 FYNP06241 537 aa15.23■□□□□ 0.03
UFD1-209ENST00000489406 THRAP10827 490 aa15.23■□□□□ 0.03
UFD1-209ENST00000489406 TXLNAP40222 546 aa15.23■□□□□ 0.03
UFD1-209ENST00000489406 IRAK1P51617 712 aa15.23■□□□□ 0.03
UFD1-209ENST00000489406 MAZP56270 477 aaKnown RBP15.23■□□□□ 0.03
UFD1-209ENST00000489406 RABGAP1LQ5R372 815 aa15.23■□□□□ 0.03
UFD1-209ENST00000489406 C1orf220Q5T0J3 134 aa15.23■□□□□ 0.03
UFD1-209ENST00000489406 TTC39BQ5VTQ0 682 aaPredicted RBP15.23■□□□□ 0.03
UFD1-209ENST00000489406 SPECC1LQ69YQ0 1117 aa15.23■□□□□ 0.03
UFD1-209ENST00000489406 C22orf39Q6P5X5 142 aa15.23■□□□□ 0.03
UFD1-209ENST00000489406 APLFQ8IW19 511 aaPredicted RBP15.23■□□□□ 0.03
UFD1-209ENST00000489406 TP53I13Q8NBR0 393 aaPredicted RBP15.23■□□□□ 0.03
UFD1-209ENST00000489406 OR4D9Q8NGE8 314 aa15.23■□□□□ 0.03
UFD1-209ENST00000489406 TAS1R2Q8TE23 839 aa15.23■□□□□ 0.03
UFD1-209ENST00000489406 RNF31Q96EP0 1072 aa15.23■□□□□ 0.03
UFD1-209ENST00000489406 BTN2A3PQ96KV6 586 aa15.23■□□□□ 0.03
UFD1-209ENST00000489406 PRMT1Q99873 361 aaKnown RBP15.23■□□□□ 0.03
UFD1-209ENST00000489406 BACH2Q9BYV9 841 aa15.23■□□□□ 0.03
UFD1-209ENST00000489406 MUC3BQ9H195 1237 aa15.23■□□□□ 0.03
UFD1-209ENST00000489406 TMEM9Q9P0T7 183 aa15.23■□□□□ 0.03
UFD1-209ENST00000489406 CGNQ9P2M7 1197 aaKnown RBP15.23■□□□□ 0.03
UFD1-209ENST00000489406 KLQ9UEF7 1012 aa15.23■□□□□ 0.03
UFD1-209ENST00000489406 RHPN2P1A8MT19 583 aa15.22■□□□□ 0.03
UFD1-209ENST00000489406 MMP20O60882 483 aa15.22■□□□□ 0.03
UFD1-209ENST00000489406 HTR1BP28222 390 aa15.22■□□□□ 0.03
UFD1-209ENST00000489406 NOP2P46087 812 aaKnown RBP15.22■□□□□ 0.03
UFD1-209ENST00000489406 PEX5P50542 639 aa15.22■□□□□ 0.03
UFD1-209ENST00000489406 RNASE9P60153 205 aaKnown RBP15.22■□□□□ 0.03
UFD1-209ENST00000489406 KRT83P78385 493 aa15.22■□□□□ 0.03
UFD1-209ENST00000489406 DPYDQ12882 1025 aa15.22■□□□□ 0.03
UFD1-209ENST00000489406 NNTQ13423 1086 aa15.22■□□□□ 0.03
UFD1-209ENST00000489406 SEMA5AQ13591 1074 aa15.22■□□□□ 0.03
UFD1-209ENST00000489406 ELOAQ14241 798 aaKnown RBP15.22■□□□□ 0.03
UFD1-209ENST00000489406 CEACAM20Q6UY09 585 aa15.22■□□□□ 0.03
UFD1-209ENST00000489406 TAC4Q86UU9 113 aa15.22■□□□□ 0.03
UFD1-209ENST00000489406 ESX1Q8N693 406 aa15.22■□□□□ 0.03
UFD1-209ENST00000489406 PDXPQ96GD0 296 aa15.22■□□□□ 0.03
UFD1-209ENST00000489406 CLIC6Q96NY7 704 aa15.22■□□□□ 0.03
UFD1-209ENST00000489406 RPRD1AQ96P16 312 aaPredicted RBP15.22■□□□□ 0.03
UFD1-209ENST00000489406 RANBP9Q96S59 729 aa15.22■□□□□ 0.03
UFD1-209ENST00000489406 PSMB7Q99436 277 aa15.22■□□□□ 0.03
UFD1-209ENST00000489406 HEPHQ9BQS7 1158 aa15.22■□□□□ 0.03
UFD1-209ENST00000489406 TWSG1Q9GZX9 223 aa15.22■□□□□ 0.03
UFD1-209ENST00000489406 ZSCAN16Q9H4T2 348 aaPredicted RBP15.22■□□□□ 0.03
UFD1-209ENST00000489406 APMAPQ9HDC9 416 aa15.22■□□□□ 0.03
UFD1-209ENST00000489406 VPS51Q9UID3 782 aa15.22■□□□□ 0.03
UFD1-209ENST00000489406 C16orf96A6NNT2 1141 aa15.21■□□□□ 0.03
UFD1-209ENST00000489406 TMEM110-MUSTN1A8MSY1 372 aa15.21■□□□□ 0.03
UFD1-209ENST00000489406 KCNU1A8MYU2 1149 aa15.21■□□□□ 0.03
UFD1-209ENST00000489406 H3BQV1 296 aa15.21■□□□□ 0.03
UFD1-209ENST00000489406 IKBKBO14920 756 aa15.21■□□□□ 0.03
UFD1-209ENST00000489406 PPP6R2O75170 966 aa15.21■□□□□ 0.03
UFD1-209ENST00000489406 TM7SF2O76062 418 aa15.21■□□□□ 0.03
UFD1-209ENST00000489406 NADKO95544 446 aaPredicted RBP15.21■□□□□ 0.03
UFD1-209ENST00000489406 DNA2P51530 1060 aa15.21■□□□□ 0.03
UFD1-209ENST00000489406 MC2RQ01718 297 aa15.21■□□□□ 0.03
UFD1-209ENST00000489406 NFATC4Q14934 902 aa15.21■□□□□ 0.03
UFD1-209ENST00000489406 IRF4Q15306 451 aa15.21■□□□□ 0.03
UFD1-209ENST00000489406 ZRSR2Q15696 482 aaKnown RBP15.21■□□□□ 0.03
UFD1-209ENST00000489406 KLHL40Q2TBA0 621 aa15.21■□□□□ 0.03
UFD1-209ENST00000489406 FBXL22Q6P050 247 aa15.21■□□□□ 0.03
UFD1-209ENST00000489406 ZNF438Q7Z4V0 828 aa15.21■□□□□ 0.03
UFD1-209ENST00000489406 TMC2Q8TDI7 906 aa15.21■□□□□ 0.03
UFD1-209ENST00000489406 RAB7BQ96AH8 199 aa15.21■□□□□ 0.03
UFD1-209ENST00000489406 SNRNP40Q96DI7 357 aaKnown RBP15.21■□□□□ 0.03
UFD1-209ENST00000489406 C1QTNF7Q9BXJ2 289 aa15.21■□□□□ 0.03
UFD1-209ENST00000489406 ASF1BQ9NVP2 202 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms