RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 TAF2Q6P1X5 1199 aa12.8□□□□□ -0.36
CLIC4-202ENST00000488683 ZNF280BQ86YH2 543 aa12.8□□□□□ -0.36
CLIC4-202ENST00000488683 STYXQ8WUJ0 223 aa12.8□□□□□ -0.36
CLIC4-202ENST00000488683 KLHL32Q96NJ5 620 aa12.8□□□□□ -0.36
CLIC4-202ENST00000488683 TSGA13Q96PP4 275 aa12.8□□□□□ -0.36
CLIC4-202ENST00000488683 VCXQ9H320 206 aa12.8□□□□□ -0.36
CLIC4-202ENST00000488683 CCDC167Q9P0B6 97 aa12.8□□□□□ -0.36
CLIC4-202ENST00000488683 HCSTQ9UBK5 93 aa12.8□□□□□ -0.36
CLIC4-202ENST00000488683 APPL1Q9UKG1 709 aa12.8□□□□□ -0.36
CLIC4-202ENST00000488683 RAP2CQ9Y3L5 183 aa12.8□□□□□ -0.36
CLIC4-202ENST00000488683 ASB3Q9Y575 518 aa12.8□□□□□ -0.36
CLIC4-202ENST00000488683 HS3ST4Q9Y661 456 aa12.8□□□□□ -0.36
CLIC4-202ENST00000488683 MYO16Q9Y6X6 1858 aa12.8□□□□□ -0.36
CLIC4-202ENST00000488683 IRAK2O43187 625 aa12.8□□□□□ -0.36
CLIC4-202ENST00000488683 PEX1O43933 1283 aa12.8□□□□□ -0.36
CLIC4-202ENST00000488683 SPATA31D3P0C874 917 aa12.8□□□□□ -0.36
CLIC4-202ENST00000488683 STMN1P16949 149 aa12.8□□□□□ -0.36
CLIC4-202ENST00000488683 RAB10P61026 200 aa12.8□□□□□ -0.36
CLIC4-202ENST00000488683 NSUN2Q08J23 767 aaKnown RBP eCLIP12.8□□□□□ -0.36
CLIC4-202ENST00000488683 CYLC2Q14093 348 aaPredicted RBP12.8□□□□□ -0.36
CLIC4-202ENST00000488683 TAF1CQ15572 869 aaPredicted RBP12.8□□□□□ -0.36
CLIC4-202ENST00000488683 MMEL1Q495T6 779 aa12.8□□□□□ -0.36
CLIC4-202ENST00000488683 FSCBQ5H9T9 825 aa12.8□□□□□ -0.36
CLIC4-202ENST00000488683 PCID2Q5JVF3 399 aa12.8□□□□□ -0.36
CLIC4-202ENST00000488683 CYP2R1Q6VVX0 501 aa12.8□□□□□ -0.36
CLIC4-202ENST00000488683 SPATA31D4Q6ZUB0 917 aa12.8□□□□□ -0.36
CLIC4-202ENST00000488683 HMGCLL1Q8TB92 370 aa12.8□□□□□ -0.36
CLIC4-202ENST00000488683 LRCH3Q96II8 777 aa12.8□□□□□ -0.36
CLIC4-202ENST00000488683 RTKNQ9BST9 563 aa12.8□□□□□ -0.36
CLIC4-202ENST00000488683 KLHL4Q9C0H6 718 aa12.8□□□□□ -0.36
CLIC4-202ENST00000488683 SENP6Q9GZR1 1112 aaPredicted RBP12.8□□□□□ -0.36
CLIC4-202ENST00000488683 IL1RL2Q9HB29 575 aa12.8□□□□□ -0.36
CLIC4-202ENST00000488683 ARHGEF38Q9NXL2 777 aa12.8□□□□□ -0.36
CLIC4-202ENST00000488683 ADA2Q9NZK5 511 aa12.8□□□□□ -0.36
CLIC4-202ENST00000488683 MARCH4Q9P2E8 410 aaPredicted RBP12.8□□□□□ -0.36
CLIC4-202ENST00000488683 TSR3Q9UJK0 312 aaKnown RBP12.8□□□□□ -0.36
CLIC4-202ENST00000488683 NOD1Q9Y239 953 aa12.8□□□□□ -0.36
CLIC4-202ENST00000488683 PATJQ8NI35 1801 aa12.79□□□□□ -0.36
CLIC4-202ENST00000488683 SCAMP3O14828 347 aaKnown RBP12.79□□□□□ -0.36
CLIC4-202ENST00000488683 CCDC166P0CW27 439 aa12.79□□□□□ -0.36
CLIC4-202ENST00000488683 SLC12A1Q13621 1099 aa12.79□□□□□ -0.36
CLIC4-202ENST00000488683 OVOS1Q6IE37 1185 aa12.79□□□□□ -0.36
CLIC4-202ENST00000488683 TMEM207Q6UWW9 146 aa12.79□□□□□ -0.36
CLIC4-202ENST00000488683 TRIM67Q6ZTA4 783 aa12.79□□□□□ -0.36
CLIC4-202ENST00000488683 ADGRG6Q86SQ4 1221 aa12.79□□□□□ -0.36
CLIC4-202ENST00000488683 LINC00523Q86TU6 105 aa12.79□□□□□ -0.36
CLIC4-202ENST00000488683 KBTBD6Q86V97 674 aa12.79□□□□□ -0.36
CLIC4-202ENST00000488683 SATL1Q86VE3 508 aa12.79□□□□□ -0.36
CLIC4-202ENST00000488683 KLHDC9Q8NEP7 349 aa12.79□□□□□ -0.36
CLIC4-202ENST00000488683 OR6P1Q8NGX9 317 aa12.79□□□□□ -0.36
CLIC4-202ENST00000488683 RPL10LQ96L21 214 aaKnown RBP12.79□□□□□ -0.36
CLIC4-202ENST00000488683 IL12RB2Q99665 862 aa12.79□□□□□ -0.36
CLIC4-202ENST00000488683 ADAM2Q99965 735 aa12.79□□□□□ -0.36
CLIC4-202ENST00000488683 DMAP1Q9NPF5 467 aaPredicted RBP12.79□□□□□ -0.36
CLIC4-202ENST00000488683 PRG3Q9Y2Y8 225 aaPredicted RBP12.79□□□□□ -0.36
CLIC4-202ENST00000488683 PDE4DIPQ5VU43 2346 aa12.79□□□□□ -0.36
CLIC4-202ENST00000488683 E9PAM4 449 aa12.79□□□□□ -0.36
CLIC4-202ENST00000488683 M0QZ92 97 aa12.79□□□□□ -0.36
CLIC4-202ENST00000488683 DDHD2O94830 711 aa12.79□□□□□ -0.36
CLIC4-202ENST00000488683 VCLP18206 1134 aa12.79□□□□□ -0.36
CLIC4-202ENST00000488683 CCNCP24863 283 aa12.79□□□□□ -0.36
CLIC4-202ENST00000488683 PRDX6P30041 224 aa12.79□□□□□ -0.36
CLIC4-202ENST00000488683 ADRA1AP35348 466 aa12.79□□□□□ -0.36
CLIC4-202ENST00000488683 WNT3AP56704 352 aa12.79□□□□□ -0.36
CLIC4-202ENST00000488683 FLOT2Q14254 428 aa12.79□□□□□ -0.36
CLIC4-202ENST00000488683 TLR1Q15399 786 aa12.79□□□□□ -0.36
CLIC4-202ENST00000488683 PSMD5Q16401 504 aa12.79□□□□□ -0.36
CLIC4-202ENST00000488683 C6orf52Q5T4I8 152 aa12.79□□□□□ -0.36
CLIC4-202ENST00000488683 PIK3R6Q5UE93 754 aa12.79□□□□□ -0.36
CLIC4-202ENST00000488683 MANEALQ5VSG8 457 aa12.79□□□□□ -0.36
CLIC4-202ENST00000488683 CNTN4Q8IWV2 1026 aa12.79□□□□□ -0.36
CLIC4-202ENST00000488683 KDM1BQ8NB78 822 aa12.79□□□□□ -0.36
CLIC4-202ENST00000488683 OR52K2Q8NGK3 314 aa12.79□□□□□ -0.36
CLIC4-202ENST00000488683 IRGQQ8WZA9 623 aa12.79□□□□□ -0.36
CLIC4-202ENST00000488683 CNBD2Q96M20 576 aa12.79□□□□□ -0.36
CLIC4-202ENST00000488683 TSNARE1Q96NA8 513 aa12.79□□□□□ -0.36
CLIC4-202ENST00000488683 GBP5Q96PP8 586 aa12.79□□□□□ -0.36
CLIC4-202ENST00000488683 FCRL5Q96RD9 977 aa12.79□□□□□ -0.36
CLIC4-202ENST00000488683 ACBD6Q9BR61 282 aa12.79□□□□□ -0.36
CLIC4-202ENST00000488683 NOL6Q9H6R4 1146 aaKnown RBP12.79□□□□□ -0.36
CLIC4-202ENST00000488683 PAPOLBQ9NRJ5 636 aaKnown RBP12.79□□□□□ -0.36
CLIC4-202ENST00000488683 TRMT13Q9NUP7 481 aaKnown RBP12.79□□□□□ -0.36
CLIC4-202ENST00000488683 UBAP1Q9NZ09 502 aa12.79□□□□□ -0.36
CLIC4-202ENST00000488683 CDYLQ9Y232 598 aa12.79□□□□□ -0.36
CLIC4-202ENST00000488683 ANKRD6Q9Y2G4 727 aa12.79□□□□□ -0.36
CLIC4-202ENST00000488683 IQCA1LA6NCM1 817 aa12.78□□□□□ -0.36
CLIC4-202ENST00000488683 CABYRO75952 493 aa12.78□□□□□ -0.36
CLIC4-202ENST00000488683 ODC1P11926 461 aa12.78□□□□□ -0.36
CLIC4-202ENST00000488683 RPL10P27635 214 aaKnown RBP12.78□□□□□ -0.36
CLIC4-202ENST00000488683 PBX3P40426 434 aa12.78□□□□□ -0.36
CLIC4-202ENST00000488683 ALDH1A3P47895 512 aa12.78□□□□□ -0.36
CLIC4-202ENST00000488683 FOLH1Q04609 750 aa12.78□□□□□ -0.36
CLIC4-202ENST00000488683 NRF1Q16656 503 aa12.78□□□□□ -0.36
CLIC4-202ENST00000488683 GPR158Q5T848 1215 aa12.78□□□□□ -0.36
CLIC4-202ENST00000488683 METTL21CQ5VZV1 264 aa12.78□□□□□ -0.36
CLIC4-202ENST00000488683 KYQ8NBH2 561 aa12.78□□□□□ -0.36
CLIC4-202ENST00000488683 PSMG2Q969U7 264 aa12.78□□□□□ -0.36
CLIC4-202ENST00000488683 HMCESQ96FZ2 354 aa12.78□□□□□ -0.36
CLIC4-202ENST00000488683 PKP2Q99959 881 aa12.78□□□□□ -0.36
CLIC4-202ENST00000488683 ZNF385DQ9H6B1 395 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms