RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 CDHR3Q6ZTQ4 885 aa20.43■□□□□ 0.86
NECAB3-213ENST00000488489 RNF135Q8IUD6 432 aa20.43■□□□□ 0.86
NECAB3-213ENST00000488489 CPXM2Q8N436 756 aa20.43■□□□□ 0.86
NECAB3-213ENST00000488489 PPHLN1Q8NEY8 458 aaKnown RBP20.43■□□□□ 0.86
NECAB3-213ENST00000488489 APOPT1Q96IL0 206 aa20.43■□□□□ 0.86
NECAB3-213ENST00000488489 ABCF3Q9NUQ8 709 aa20.43■□□□□ 0.86
NECAB3-213ENST00000488489 HCFC2Q9Y5Z7 792 aa20.43■□□□□ 0.86
NECAB3-213ENST00000488489 HELZP42694 1942 aaKnown RBP20.43■□□□□ 0.86
NECAB3-213ENST00000488489 TYW5A2RUC4 315 aaKnown RBP20.42■□□□□ 0.86
NECAB3-213ENST00000488489 ZWINTO95229 277 aa20.42■□□□□ 0.86
NECAB3-213ENST00000488489 ATP6V1G2O95670 118 aa20.42■□□□□ 0.86
NECAB3-213ENST00000488489 ALDOAP04075 364 aaKnown RBP20.42■□□□□ 0.86
NECAB3-213ENST00000488489 CR2P20023 1033 aa20.42■□□□□ 0.86
NECAB3-213ENST00000488489 ADRA1DP25100 572 aa20.42■□□□□ 0.86
NECAB3-213ENST00000488489 HOXA9P31269 272 aa20.42■□□□□ 0.86
NECAB3-213ENST00000488489 CSKP41240 450 aa20.42■□□□□ 0.86
NECAB3-213ENST00000488489 MAGEA10P43363 369 aaPredicted RBP20.42■□□□□ 0.86
NECAB3-213ENST00000488489 ARCN1P48444 511 aaKnown RBP20.42■□□□□ 0.86
NECAB3-213ENST00000488489 NEK3P51956 506 aa20.42■□□□□ 0.86
NECAB3-213ENST00000488489 CNGA3Q16281 694 aa20.42■□□□□ 0.86
NECAB3-213ENST00000488489 ADGRD2Q7Z7M1 963 aa20.42■□□□□ 0.86
NECAB3-213ENST00000488489 CPNE1Q99829 537 aa20.42■□□□□ 0.86
NECAB3-213ENST00000488489 IARS2Q9NSE4 1012 aaKnown RBP20.42■□□□□ 0.86
NECAB3-213ENST00000488489 TREX1Q9NSU2 369 aa20.42■□□□□ 0.86
NECAB3-213ENST00000488489 PRKAG3Q9UGI9 489 aa20.42■□□□□ 0.86
NECAB3-213ENST00000488489 VPS28Q9UK41 221 aa20.42■□□□□ 0.86
NECAB3-213ENST00000488489 ZNF510Q9Y2H8 683 aa20.42■□□□□ 0.86
NECAB3-213ENST00000488489 USP15Q9Y4E8 981 aaPredicted RBP20.42■□□□□ 0.86
NECAB3-213ENST00000488489 SZT2Q5T011 3432 aa20.42■□□□□ 0.86
NECAB3-213ENST00000488489 TCP11X1B4DZS4 312 aa20.42■□□□□ 0.86
NECAB3-213ENST00000488489 ITGA2BP08514 1039 aa20.42■□□□□ 0.86
NECAB3-213ENST00000488489 CNTFP26441 200 aa20.42■□□□□ 0.86
NECAB3-213ENST00000488489 AVPR1AP37288 418 aa20.42■□□□□ 0.86
NECAB3-213ENST00000488489 GP5P40197 560 aa20.42■□□□□ 0.86
NECAB3-213ENST00000488489 SCNN1BP51168 640 aa20.42■□□□□ 0.86
NECAB3-213ENST00000488489 ERVK-21P61565 698 aa20.42■□□□□ 0.86
NECAB3-213ENST00000488489 SF3A3Q12874 501 aaKnown RBP eCLIP20.42■□□□□ 0.865e-7■■■□□ 17
NECAB3-213ENST00000488489 RFTN1Q14699 578 aaPredicted RBP20.42■□□□□ 0.86
NECAB3-213ENST00000488489 TIFABQ6ZNK6 161 aa20.42■□□□□ 0.86
NECAB3-213ENST00000488489 GRASPQ7Z6J2 395 aaPredicted RBP20.42■□□□□ 0.86
NECAB3-213ENST00000488489 STRA8Q7Z7C7 330 aa20.42■□□□□ 0.86
NECAB3-213ENST00000488489 MFN1Q8IWA4 741 aa20.42■□□□□ 0.86
NECAB3-213ENST00000488489 BBS5Q8N3I7 341 aa20.42■□□□□ 0.86
NECAB3-213ENST00000488489 PTCD2Q8WV60 388 aaKnown RBP20.42■□□□□ 0.86
NECAB3-213ENST00000488489 USP13Q92995 863 aaPredicted RBP20.42■□□□□ 0.86
NECAB3-213ENST00000488489 MAGEB18Q96M61 343 aa20.42■□□□□ 0.86
NECAB3-213ENST00000488489 MRM3Q9HC36 420 aaKnown RBP20.42■□□□□ 0.86
NECAB3-213ENST00000488489 VAPBO95292 243 aa20.41■□□□□ 0.86
NECAB3-213ENST00000488489 SERPINF2P08697 491 aa20.41■□□□□ 0.86
NECAB3-213ENST00000488489 CCNFP41002 786 aa20.41■□□□□ 0.86
NECAB3-213ENST00000488489 IL9RQ01113 521 aa20.41■□□□□ 0.86
NECAB3-213ENST00000488489 CDK18Q07002 472 aa20.41■□□□□ 0.86
NECAB3-213ENST00000488489 SEPT6Q14141 434 aa20.41■□□□□ 0.86
NECAB3-213ENST00000488489 APCDD1Q8J025 514 aa20.41■□□□□ 0.86
NECAB3-213ENST00000488489 ZNF707Q96C28 371 aaPredicted RBP20.41■□□□□ 0.86
NECAB3-213ENST00000488489 MCMBPQ9BTE3 642 aa20.41■□□□□ 0.86
NECAB3-213ENST00000488489 TASP1Q9H6P5 420 aa20.41■□□□□ 0.86
NECAB3-213ENST00000488489 TM9SF1O15321 606 aa20.41■□□□□ 0.86
NECAB3-213ENST00000488489 HNRNPA1P09651 372 aaKnown RBP eCLIP20.41■□□□□ 0.86
NECAB3-213ENST00000488489 ETV4P43268 484 aa20.41■□□□□ 0.86
NECAB3-213ENST00000488489 ABCG1P45844 678 aa20.41■□□□□ 0.86
NECAB3-213ENST00000488489 PRSS36Q5K4E3 855 aa20.41■□□□□ 0.86
NECAB3-213ENST00000488489 PDPK2PQ6A1A2 396 aa20.41■□□□□ 0.86
NECAB3-213ENST00000488489 FEM1CQ96JP0 617 aa20.41■□□□□ 0.86
NECAB3-213ENST00000488489 ZSWIM3Q96MP5 696 aa20.41■□□□□ 0.86
NECAB3-213ENST00000488489 SRPK1Q96SB4 655 aaKnown RBP20.41■□□□□ 0.86
NECAB3-213ENST00000488489 SLC13A1Q9BZW2 595 aa20.41■□□□□ 0.86
NECAB3-213ENST00000488489 FGFR1OP2Q9NVK5 253 aa20.41■□□□□ 0.86
NECAB3-213ENST00000488489 TXNDC16Q9P2K2 825 aa20.41■□□□□ 0.86
NECAB3-213ENST00000488489 VPS51Q9UID3 782 aa20.41■□□□□ 0.86
NECAB3-213ENST00000488489 CCDC195A0A1B0GUA6 201 aa20.4■□□□□ 0.86
NECAB3-213ENST00000488489 INSIG1O15503 277 aa20.4■□□□□ 0.86
NECAB3-213ENST00000488489 TMCC1O94876 653 aa20.4■□□□□ 0.86
NECAB3-213ENST00000488489 PRAMEF12O95522 483 aa20.4■□□□□ 0.86
NECAB3-213ENST00000488489 FGF19O95750 216 aa20.4■□□□□ 0.86
NECAB3-213ENST00000488489 TOP3BO95985 862 aaKnown RBP20.4■□□□□ 0.86
NECAB3-213ENST00000488489 MT-CO1P00395 513 aa20.4■□□□□ 0.86
NECAB3-213ENST00000488489 EZRP15311 586 aaKnown RBP20.4■□□□□ 0.86
NECAB3-213ENST00000488489 TAC1P20366 129 aa20.4■□□□□ 0.86
NECAB3-213ENST00000488489 MYO9BQ13459 2157 aa20.4■□□□□ 0.86
NECAB3-213ENST00000488489 RIPK1Q13546 671 aa20.4■□□□□ 0.86
NECAB3-213ENST00000488489 MPPE1Q53F39 396 aa20.4■□□□□ 0.86
NECAB3-213ENST00000488489 MPP7Q5T2T1 576 aa20.4■□□□□ 0.86
NECAB3-213ENST00000488489 GRTP1Q5TC63 336 aa20.4■□□□□ 0.86
NECAB3-213ENST00000488489 GPATCH11Q8N954 259 aa20.4■□□□□ 0.86
NECAB3-213ENST00000488489 SPOCK2Q92563 424 aa20.4■□□□□ 0.86
NECAB3-213ENST00000488489 IFT43Q96FT9 208 aa20.4■□□□□ 0.86
NECAB3-213ENST00000488489 ATXN7L3BQ96GX2 97 aa20.4■□□□□ 0.86
NECAB3-213ENST00000488489 TRIB3Q96RU7 358 aa20.4■□□□□ 0.86
NECAB3-213ENST00000488489 RBBP8Q99708 897 aa20.4■□□□□ 0.86
NECAB3-213ENST00000488489 PRKD2Q9BZL6 878 aa20.4■□□□□ 0.86
NECAB3-213ENST00000488489 CXorf56Q9H5V9 222 aa20.4■□□□□ 0.86
NECAB3-213ENST00000488489 PCMTD2Q9NV79 361 aa20.4■□□□□ 0.86
NECAB3-213ENST00000488489 E2F8A0AVK6 867 aa20.39■□□□□ 0.86
NECAB3-213ENST00000488489 COPEO14579 308 aa20.39■□□□□ 0.86
NECAB3-213ENST00000488489 TPP1O14773 563 aa20.39■□□□□ 0.86
NECAB3-213ENST00000488489 XYLBO75191 536 aa20.39■□□□□ 0.86
NECAB3-213ENST00000488489 UBOX5O94941 541 aa20.39■□□□□ 0.86
NECAB3-213ENST00000488489 EPOP01588 193 aa20.39■□□□□ 0.86
NECAB3-213ENST00000488489 PRKCGP05129 697 aa20.39■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms