RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 SLC2A6Q9UGQ3 507 aa9.53□□□□□ -0.88
SF3B1-211ENST00000487698 CCDC85CA6NKD9 419 aa9.53□□□□□ -0.88
SF3B1-211ENST00000487698 GOLGA8RI6L899 631 aa9.53□□□□□ -0.88
SF3B1-211ENST00000487698 SIN3BO75182 1162 aa9.53□□□□□ -0.88
SF3B1-211ENST00000487698 ASMTLO95671 621 aa9.53□□□□□ -0.88
SF3B1-211ENST00000487698 NDST3O95803 873 aa9.53□□□□□ -0.88
SF3B1-211ENST00000487698 MT-CO1P00395 513 aa9.53□□□□□ -0.88
SF3B1-211ENST00000487698 PRLP01236 227 aa9.53□□□□□ -0.88
SF3B1-211ENST00000487698 CA4P22748 312 aa9.53□□□□□ -0.88
SF3B1-211ENST00000487698 HLA-FP30511 346 aa9.53□□□□□ -0.88
SF3B1-211ENST00000487698 RPA3P35244 121 aaPredicted RBP9.53□□□□□ -0.88
SF3B1-211ENST00000487698 SCNN1BP51168 640 aa9.53□□□□□ -0.88
SF3B1-211ENST00000487698 NEK3P51956 506 aa9.53□□□□□ -0.88
SF3B1-211ENST00000487698 DNAJC3Q13217 504 aa9.53□□□□□ -0.88
SF3B1-211ENST00000487698 CBX2Q14781 532 aaPredicted RBP9.53□□□□□ -0.88
SF3B1-211ENST00000487698 LRRC14Q15048 493 aa9.53□□□□□ -0.88
SF3B1-211ENST00000487698 SMAD1Q15797 465 aaKnown RBP9.53□□□□□ -0.88
SF3B1-211ENST00000487698 HSP90AA5PQ58FG0 334 aa9.53□□□□□ -0.88
SF3B1-211ENST00000487698 RALGPS1Q5JS13 557 aa9.53□□□□□ -0.88
SF3B1-211ENST00000487698 RETSATQ6NUM9 610 aa9.53□□□□□ -0.88
SF3B1-211ENST00000487698 ESRP1Q6NXG1 681 aaKnown RBP9.53□□□□□ -0.88
SF3B1-211ENST00000487698 TMC5Q6UXY8 1006 aa9.53□□□□□ -0.88
SF3B1-211ENST00000487698 KIAA1958Q8N8K9 716 aa9.53□□□□□ -0.88
SF3B1-211ENST00000487698 IRF7Q92985 503 aa9.53□□□□□ -0.88
SF3B1-211ENST00000487698 IFT43Q96FT9 208 aa9.53□□□□□ -0.88
SF3B1-211ENST00000487698 APOPT1Q96IL0 206 aa9.53□□□□□ -0.88
SF3B1-211ENST00000487698 ZNF317Q96PQ6 595 aaPredicted RBP9.53□□□□□ -0.88
SF3B1-211ENST00000487698 AGAP2Q99490 1192 aa9.53□□□□□ -0.88
SF3B1-211ENST00000487698 KLF6Q99612 283 aaPredicted RBP9.53□□□□□ -0.88
SF3B1-211ENST00000487698 RBBP8Q99708 897 aa9.53□□□□□ -0.88
SF3B1-211ENST00000487698 SLC28A3Q9HAS3 691 aa9.53□□□□□ -0.88
SF3B1-211ENST00000487698 PIDD1Q9HB75 910 aa9.53□□□□□ -0.88
SF3B1-211ENST00000487698 SCUBE2Q9NQ36 999 aa9.53□□□□□ -0.88
SF3B1-211ENST00000487698 DZANK1Q9NVP4 752 aa9.53□□□□□ -0.88
SF3B1-211ENST00000487698 MARK1Q9P0L2 795 aa9.53□□□□□ -0.88
SF3B1-211ENST00000487698 FCF1Q9Y324 198 aaKnown RBP9.53□□□□□ -0.88
SF3B1-211ENST00000487698 ARIH1Q9Y4X5 557 aaPredicted RBP9.53□□□□□ -0.88
SF3B1-211ENST00000487698 COL4A3Q01955 1670 aa9.53□□□□□ -0.88
SF3B1-211ENST00000487698 BPTFQ12830 3046 aa9.53□□□□□ -0.88
SF3B1-211ENST00000487698 SCN8AQ9UQD0 1980 aa9.52□□□□□ -0.88
SF3B1-211ENST00000487698 KIAA1549LQ6ZVL6 1849 aa9.52□□□□□ -0.88
SF3B1-211ENST00000487698 CCDC78A2IDD5 438 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 LDB2O43679 373 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 ZWINTO95229 277 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 GLP2RO95838 553 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 ALDOAP04075 364 aaKnown RBP9.52□□□□□ -0.89
SF3B1-211ENST00000487698 ITGA2BP08514 1039 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 PYGBP11216 843 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 ALADP13716 330 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 LIMK2P53671 638 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 SEC24CP53992 1094 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 CSE1LP55060 971 aaKnown RBP9.52□□□□□ -0.89
SF3B1-211ENST00000487698 SEPT6Q14141 434 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 GALNT3Q14435 633 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 CNGA3Q16281 694 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 PITRM1Q5JRX3 1037 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 TSTD2Q5T7W7 516 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 COL13A1Q5TAT6 717 aaPredicted RBP9.52□□□□□ -0.89
SF3B1-211ENST00000487698 GRTP1Q5TC63 336 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 MROH9Q5TGP6 573 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 ASTLQ6HA08 431 aaPredicted RBP9.52□□□□□ -0.89
SF3B1-211ENST00000487698 NCEH1Q6PIU2 408 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 NLRP9Q7RTR0 991 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 RNF135Q8IUD6 432 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 CELF5Q8N6W0 485 aaKnown RBP9.52□□□□□ -0.89
SF3B1-211ENST00000487698 OR13J1Q8NGT2 312 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 MGARPQ8TDB4 240 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 CKAP2Q8WWK9 683 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 ATP2A3Q93084 1043 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 ISL2Q96A47 359 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 MRPL38Q96DV4 380 aaKnown RBP9.52□□□□□ -0.89
SF3B1-211ENST00000487698 LRRC3BQ96PB8 259 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 LINC00597Q9H2U6 94 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 MLXIPLQ9NP71 852 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 SPHK2Q9NRA0 654 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 ABCB8Q9NUT2 735 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 DENND4AQ7Z401 1863 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 ZNF106Q9H2Y7 1883 aaKnown RBP9.52□□□□□ -0.89
SF3B1-211ENST00000487698 GMNCA6NCL1 334 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 NEDD8-MDP1E9PL57 170 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 K7ERQ8 282 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 TM9SF1O15321 606 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 VAPBO95292 243 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 GBP2P32456 591 aaPredicted RBP9.52□□□□□ -0.89
SF3B1-211ENST00000487698 MAGEA12P43365 314 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 RHOAP61586 193 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 AP1S1P61966 158 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 ACVR1Q04771 509 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 TRAF2Q12933 501 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 FUT11Q495W5 492 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 TMEM184AQ6ZMB5 413 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 STRA8Q7Z7C7 330 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 METTL3Q86U44 580 aaKnown RBP9.52□□□□□ -0.89
SF3B1-211ENST00000487698 NPAS3Q8IXF0 933 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 ADGRG2Q8IZP9 1017 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 TCP10LQ8TDR4 215 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 PEX13Q92968 403 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 RSPRY1Q96DX4 576 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 BBS2Q9BXC9 721 aa9.52□□□□□ -0.89
SF3B1-211ENST00000487698 IARS2Q9NSE4 1012 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms