RNA–Protein interactions for RNA: ENST00000487656.1

MACF1-221, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 323 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-221ENST00000487656 DGKAP23743 735 aa5.7□□□□□ -1.5
MACF1-221ENST00000487656 RBMS1P29558 406 aaKnown RBP5.7□□□□□ -1.5
MACF1-221ENST00000487656 PPP1R2P41236 205 aa5.7□□□□□ -1.5
MACF1-221ENST00000487656 GPD2P43304 727 aa5.7□□□□□ -1.5
MACF1-221ENST00000487656 SNX16P57768 344 aa5.7□□□□□ -1.5
MACF1-221ENST00000487656 HNRNPKP61978 463 aaKnown RBP eCLIP5.7□□□□□ -1.5
MACF1-221ENST00000487656 GABREP78334 506 aa5.7□□□□□ -1.5
MACF1-221ENST00000487656 KRT83P78385 493 aa5.7□□□□□ -1.5
MACF1-221ENST00000487656 GCNT1Q02742 428 aa5.7□□□□□ -1.5
MACF1-221ENST00000487656 PNOCQ13519 176 aa5.7□□□□□ -1.5
MACF1-221ENST00000487656 MEA1Q16626 185 aa5.7□□□□□ -1.5
MACF1-221ENST00000487656 POM121L1PQ3SYA9 428 aa5.7□□□□□ -1.5
MACF1-221ENST00000487656 CCDC40Q4G0X9 1142 aa5.7□□□□□ -1.5
MACF1-221ENST00000487656 EFHC1Q5JVL4 640 aa5.7□□□□□ -1.5
MACF1-221ENST00000487656 ARHGAP40Q5TG30 622 aa5.7□□□□□ -1.5
MACF1-221ENST00000487656 AGBL4Q5VU57 503 aa5.7□□□□□ -1.5
MACF1-221ENST00000487656 BNC2Q6ZN30 1099 aaPredicted RBP5.7□□□□□ -1.5
MACF1-221ENST00000487656 RRAGAQ7L523 313 aa5.7□□□□□ -1.5
MACF1-221ENST00000487656 TMC6Q7Z403 805 aa5.7□□□□□ -1.5
MACF1-221ENST00000487656 TMEM110Q86TL2 294 aa5.7□□□□□ -1.5
MACF1-221ENST00000487656 TAC4Q86UU9 113 aa5.7□□□□□ -1.5
MACF1-221ENST00000487656 ERICH1Q86X53 443 aa5.7□□□□□ -1.5
MACF1-221ENST00000487656 ATP11CQ8NB49 1132 aa5.7□□□□□ -1.5
MACF1-221ENST00000487656 TMIEQ8NEW7 156 aa5.7□□□□□ -1.5
MACF1-221ENST00000487656 FRS2Q8WU20 508 aa5.7□□□□□ -1.5
MACF1-221ENST00000487656 KCNE4Q8WWG9 221 aa5.7□□□□□ -1.5
MACF1-221ENST00000487656 ZNF606Q8WXB4 792 aa5.7□□□□□ -1.5
MACF1-221ENST00000487656 GATAD2BQ8WXI9 593 aa5.7□□□□□ -1.5
MACF1-221ENST00000487656 SMARCE1Q969G3 411 aa5.7□□□□□ -1.5
MACF1-221ENST00000487656 FAM131CQ96AQ9 280 aa5.7□□□□□ -1.5
MACF1-221ENST00000487656 NAF1Q96HR8 494 aaKnown RBP5.7□□□□□ -1.5
MACF1-221ENST00000487656 DHTKD1Q96HY7 919 aaPredicted RBP5.7□□□□□ -1.5
MACF1-221ENST00000487656 EAF1Q96JC9 268 aaPredicted RBP5.7□□□□□ -1.5
MACF1-221ENST00000487656 RPRD1AQ96P16 312 aaPredicted RBP5.7□□□□□ -1.5
MACF1-221ENST00000487656 ZSWIM1Q9BR11 485 aa5.7□□□□□ -1.5
MACF1-221ENST00000487656 SRRTQ9BXP5 876 aaKnown RBP5.7□□□□□ -1.5
MACF1-221ENST00000487656 OSBPL2Q9H1P3 480 aa5.7□□□□□ -1.5
MACF1-221ENST00000487656 FAM204AQ9H8W3 233 aa5.7□□□□□ -1.5
MACF1-221ENST00000487656 POLR1BQ9H9Y6 1135 aa5.7□□□□□ -1.5
MACF1-221ENST00000487656 THSD1Q9NS62 852 aa5.7□□□□□ -1.5
MACF1-221ENST00000487656 NLGN3Q9NZ94 848 aa5.7□□□□□ -1.5
MACF1-221ENST00000487656 NCKIPSDQ9NZQ3 722 aa5.7□□□□□ -1.5
MACF1-221ENST00000487656 IPO11Q9UI26 975 aaKnown RBP5.7□□□□□ -1.5
MACF1-221ENST00000487656 XPO7Q9UIA9 1087 aaKnown RBP5.7□□□□□ -1.5
MACF1-221ENST00000487656 VPS28Q9UK41 221 aa5.7□□□□□ -1.5
MACF1-221ENST00000487656 SARDHQ9UL12 918 aa5.7□□□□□ -1.5
MACF1-221ENST00000487656 HS3ST3A1Q9Y663 406 aa5.7□□□□□ -1.5
MACF1-221ENST00000487656 SETXQ7Z333 2677 aaKnown RBP5.7□□□□□ -1.5
MACF1-221ENST00000487656 SYNJ2BP-COX16A0A087WUM0 186 aa5.69□□□□□ -1.5
MACF1-221ENST00000487656 LOC100289279A0A1B0GTE1 492 aa5.69□□□□□ -1.5
MACF1-221ENST00000487656 A6NNZ2 444 aa5.69□□□□□ -1.5
MACF1-221ENST00000487656 E5RJQ4 531 aa5.69□□□□□ -1.5
MACF1-221ENST00000487656 KPNA3O00505 521 aaPredicted RBP5.69□□□□□ -1.5
MACF1-221ENST00000487656 SCAMP1O15126 338 aa5.69□□□□□ -1.5
MACF1-221ENST00000487656 KLK10O43240 276 aa5.69□□□□□ -1.5
MACF1-221ENST00000487656 THAP12O43422 761 aa5.69□□□□□ -1.5
MACF1-221ENST00000487656 CSO75390 466 aaKnown RBP5.69□□□□□ -1.5
MACF1-221ENST00000487656 PIAS2O75928 621 aa5.69□□□□□ -1.5
MACF1-221ENST00000487656 LETM1O95202 739 aaPredicted RBP5.69□□□□□ -1.5
MACF1-221ENST00000487656 ECEL1O95672 775 aa5.69□□□□□ -1.5
MACF1-221ENST00000487656 GNA14O95837 355 aa5.69□□□□□ -1.5
MACF1-221ENST00000487656 BPNT1O95861 308 aa5.69□□□□□ -1.5
MACF1-221ENST00000487656 IGLV3-25P01717 112 aa5.69□□□□□ -1.5
MACF1-221ENST00000487656 PRNPP04156 253 aa5.69□□□□□ -1.5
MACF1-221ENST00000487656 MPOP05164 745 aa5.69□□□□□ -1.5
MACF1-221ENST00000487656 GLI1P08151 1106 aa5.69□□□□□ -1.5
MACF1-221ENST00000487656 PRLRP16471 622 aa5.69□□□□□ -1.5
MACF1-221ENST00000487656 HNRNPA2B1P22626 353 aaKnown RBP5.69□□□□□ -1.5
MACF1-221ENST00000487656 DNAJA1P31689 397 aaKnown RBP5.69□□□□□ -1.5
MACF1-221ENST00000487656 CHRNA3P32297 505 aa5.69□□□□□ -1.5
MACF1-221ENST00000487656 RECQLP46063 649 aaPredicted RBP5.69□□□□□ -1.5
MACF1-221ENST00000487656 NUMBP49757 651 aa5.69□□□□□ -1.5
MACF1-221ENST00000487656 PMS1P54277 932 aaKnown RBP5.69□□□□□ -1.5
MACF1-221ENST00000487656 CDH4P55283 916 aa5.69□□□□□ -1.5
MACF1-221ENST00000487656 AUHQ13825 339 aaKnown RBP5.69□□□□□ -1.5
MACF1-221ENST00000487656 SEPT6Q14141 434 aa5.69□□□□□ -1.5
MACF1-221ENST00000487656 CDCP2Q5VXM1 449 aa5.69□□□□□ -1.5
MACF1-221ENST00000487656 CXorf57Q6NSI4 855 aaKnown RBP5.69□□□□□ -1.5
MACF1-221ENST00000487656 FBXL22Q6P050 247 aa5.69□□□□□ -1.5
MACF1-221ENST00000487656 Q6ZSR6 202 aa5.69□□□□□ -1.5
MACF1-221ENST00000487656 ENOSF1Q7L5Y1 443 aa5.69□□□□□ -1.5
MACF1-221ENST00000487656 HORMAD1Q86X24 394 aa5.69□□□□□ -1.5
MACF1-221ENST00000487656 SH2D3CQ8N5H7 860 aa5.69□□□□□ -1.5
MACF1-221ENST00000487656 FAM181AQ8N9Y4 354 aa5.69□□□□□ -1.5
MACF1-221ENST00000487656 TMEM145Q8NBT3 493 aa5.69□□□□□ -1.5
MACF1-221ENST00000487656 LMO3Q8TAP4 145 aa5.69□□□□□ -1.5
MACF1-221ENST00000487656 MAPK15Q8TD08 544 aa5.69□□□□□ -1.5
MACF1-221ENST00000487656 SREK1Q8WXA9 508 aaKnown RBP5.69□□□□□ -1.5
MACF1-221ENST00000487656 KLK6Q92876 244 aa5.69□□□□□ -1.5
MACF1-221ENST00000487656 NKD1Q969G9 470 aa5.69□□□□□ -1.5
MACF1-221ENST00000487656 ALG14Q96F25 216 aa5.69□□□□□ -1.5
MACF1-221ENST00000487656 PPP1R16AQ96I34 528 aa5.69□□□□□ -1.5
MACF1-221ENST00000487656 HIC2Q96JB3 615 aa5.69□□□□□ -1.5
MACF1-221ENST00000487656 FEM1CQ96JP0 617 aa5.69□□□□□ -1.5
MACF1-221ENST00000487656 FAM81BQ96LP2 452 aa5.69□□□□□ -1.5
MACF1-221ENST00000487656 APOLD1Q96LR9 279 aa5.69□□□□□ -1.5
MACF1-221ENST00000487656 NOX5Q96PH1 765 aa5.69□□□□□ -1.5
MACF1-221ENST00000487656 PRMT1Q99873 361 aaKnown RBP5.69□□□□□ -1.5
MACF1-221ENST00000487656 MYOCQ99972 504 aa5.69□□□□□ -1.5
MACF1-221ENST00000487656 CALN1Q9BXU9 219 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms