RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 DNAI1Q9UI46 699 aa19.71■□□□□ 0.75
SMPDL3A-202ENST00000487215 RABGEF1Q9UJ41 708 aa19.71■□□□□ 0.75
SMPDL3A-202ENST00000487215 PLD2O14939 933 aa19.7■□□□□ 0.74
SMPDL3A-202ENST00000487215 TM7SF2O76062 418 aa19.7■□□□□ 0.74
SMPDL3A-202ENST00000487215 WISP1O95388 367 aa19.7■□□□□ 0.74
SMPDL3A-202ENST00000487215 POP4O95707 220 aaKnown RBP19.7■□□□□ 0.74
SMPDL3A-202ENST00000487215 MAPKAPK2P49137 400 aa19.7■□□□□ 0.74
SMPDL3A-202ENST00000487215 ATP11AP98196 1134 aa19.7■□□□□ 0.74
SMPDL3A-202ENST00000487215 NRG1Q02297 640 aaPredicted RBP19.7■□□□□ 0.74
SMPDL3A-202ENST00000487215 ATXN7L2Q5T6C5 722 aaPredicted RBP19.7■□□□□ 0.74
SMPDL3A-202ENST00000487215 RWDD4Q6NW29 188 aaKnown RBP19.7■□□□□ 0.74
SMPDL3A-202ENST00000487215 TTC7BQ86TV6 843 aa19.7■□□□□ 0.74
SMPDL3A-202ENST00000487215 EMC1Q8N766 993 aa19.7■□□□□ 0.74
SMPDL3A-202ENST00000487215 ARL10Q8N8L6 244 aa19.7■□□□□ 0.74
SMPDL3A-202ENST00000487215 KYQ8NBH2 561 aa19.7■□□□□ 0.74
SMPDL3A-202ENST00000487215 CXorf40AQ8TE69 158 aa19.7■□□□□ 0.74
SMPDL3A-202ENST00000487215 EPAS1Q99814 870 aa19.7■□□□□ 0.74
SMPDL3A-202ENST00000487215 C1QTNF7Q9BXJ2 289 aa19.7■□□□□ 0.74
SMPDL3A-202ENST00000487215 EPB41L5Q9HCM4 733 aa19.7■□□□□ 0.74
SMPDL3A-202ENST00000487215 WDR70Q9NW82 654 aa19.7■□□□□ 0.74
SMPDL3A-202ENST00000487215 GULP1Q9UBP9 304 aa19.7■□□□□ 0.74
SMPDL3A-202ENST00000487215 OR12D3Q9UGF7 316 aa19.7■□□□□ 0.74
SMPDL3A-202ENST00000487215 NEU3Q9UQ49 428 aa19.7■□□□□ 0.74
SMPDL3A-202ENST00000487215 PCDHGA7Q9Y5G6 932 aa19.7■□□□□ 0.74
SMPDL3A-202ENST00000487215 RP1P56715 2156 aa19.7■□□□□ 0.74
SMPDL3A-202ENST00000487215 KIF26BQ2KJY2 2108 aa19.69■□□□□ 0.74
SMPDL3A-202ENST00000487215 TOR1BO14657 336 aa19.69■□□□□ 0.74
SMPDL3A-202ENST00000487215 GADD45BO75293 160 aaPredicted RBP19.69■□□□□ 0.74
SMPDL3A-202ENST00000487215 RHOQP17081 205 aa19.69■□□□□ 0.74
SMPDL3A-202ENST00000487215 ITIH2P19823 946 aa19.69■□□□□ 0.74
SMPDL3A-202ENST00000487215 SLC5A2P31639 672 aa19.69■□□□□ 0.74
SMPDL3A-202ENST00000487215 EIF3IQ13347 325 aaKnown RBP19.69■□□□□ 0.74
SMPDL3A-202ENST00000487215 RAPGEF1Q13905 1077 aa19.69■□□□□ 0.74
SMPDL3A-202ENST00000487215 KLHL40Q2TBA0 621 aa19.69■□□□□ 0.74
SMPDL3A-202ENST00000487215 GDPD4Q6W3E5 623 aa19.69■□□□□ 0.74
SMPDL3A-202ENST00000487215 ARCQ7LC44 396 aa19.69■□□□□ 0.74
SMPDL3A-202ENST00000487215 PRICKLE2Q7Z3G6 844 aa19.69■□□□□ 0.74
SMPDL3A-202ENST00000487215 FSTL5Q8N475 847 aaPredicted RBP19.69■□□□□ 0.74
SMPDL3A-202ENST00000487215 FBXO39Q8N4B4 442 aa19.69■□□□□ 0.74
SMPDL3A-202ENST00000487215 EXD3Q8N9H8 876 aa19.69■□□□□ 0.74
SMPDL3A-202ENST00000487215 PCDH19Q8TAB3 1148 aa19.69■□□□□ 0.74
SMPDL3A-202ENST00000487215 CCDC74AQ96AQ1 378 aa19.69■□□□□ 0.74
SMPDL3A-202ENST00000487215 MAGEH1Q9H213 219 aa19.69■□□□□ 0.74
SMPDL3A-202ENST00000487215 METTL5Q9NRN9 209 aaKnown RBP19.69■□□□□ 0.74
SMPDL3A-202ENST00000487215 TMEM248Q9NWD8 314 aa19.69■□□□□ 0.74
SMPDL3A-202ENST00000487215 SIRPGQ9P1W8 387 aa19.69■□□□□ 0.74
SMPDL3A-202ENST00000487215 DOLKQ9UPQ8 538 aa19.69■□□□□ 0.74
SMPDL3A-202ENST00000487215 D6RAR5 112 aa19.68■□□□□ 0.74
SMPDL3A-202ENST00000487215 FAM72CH0Y354 149 aa19.68■□□□□ 0.74
SMPDL3A-202ENST00000487215 ARHGAP6O43182 974 aa19.68■□□□□ 0.74
SMPDL3A-202ENST00000487215 RAMP2O60895 175 aa19.68■□□□□ 0.74
SMPDL3A-202ENST00000487215 LSM8O95777 96 aaKnown RBP19.68■□□□□ 0.74
SMPDL3A-202ENST00000487215 ADRA1BP35368 520 aa19.68■□□□□ 0.74
SMPDL3A-202ENST00000487215 UGT1A5P35504 534 aa19.68■□□□□ 0.74
SMPDL3A-202ENST00000487215 BLKP51451 505 aa19.68■□□□□ 0.74
SMPDL3A-202ENST00000487215 NFATC3Q12968 1075 aa19.68■□□□□ 0.74
SMPDL3A-202ENST00000487215 IRF4Q15306 451 aa19.68■□□□□ 0.74
SMPDL3A-202ENST00000487215 ELOCQ15369 112 aa19.68■□□□□ 0.74
SMPDL3A-202ENST00000487215 TCEA2Q15560 299 aa19.68■□□□□ 0.74
SMPDL3A-202ENST00000487215 MAN2A1Q16706 1144 aa19.68■□□□□ 0.74
SMPDL3A-202ENST00000487215 CDO1Q16878 200 aa19.68■□□□□ 0.74
SMPDL3A-202ENST00000487215 FAM72AQ5TYM5 149 aa19.68■□□□□ 0.74
SMPDL3A-202ENST00000487215 FAM72DQ6L9T8 149 aa19.68■□□□□ 0.74
SMPDL3A-202ENST00000487215 RAB11FIP2Q7L804 512 aa19.68■□□□□ 0.74
SMPDL3A-202ENST00000487215 NOP9Q86U38 636 aaKnown RBP19.68■□□□□ 0.74
SMPDL3A-202ENST00000487215 FAM72BQ86X60 149 aa19.68■□□□□ 0.74
SMPDL3A-202ENST00000487215 JAMLQ86YT9 394 aa19.68■□□□□ 0.74
SMPDL3A-202ENST00000487215 SDR16C5Q8N3Y7 309 aa19.68■□□□□ 0.74
SMPDL3A-202ENST00000487215 MSANTD4Q8NCY6 345 aa19.68■□□□□ 0.74
SMPDL3A-202ENST00000487215 GFM1Q96RP9 751 aaKnown RBP19.68■□□□□ 0.74
SMPDL3A-202ENST00000487215 WRAP53Q9BUR4 548 aaKnown RBP19.68■□□□□ 0.74
SMPDL3A-202ENST00000487215 FOXP3Q9BZS1 431 aa19.68■□□□□ 0.74
SMPDL3A-202ENST00000487215 RETREG1Q9H6L5 497 aa19.68■□□□□ 0.74
SMPDL3A-202ENST00000487215 HPCAL4Q9UM19 191 aa19.68■□□□□ 0.74
SMPDL3A-202ENST00000487215 FHOD1Q9Y613 1164 aa19.68■□□□□ 0.74
SMPDL3A-202ENST00000487215 A0A1W2PQM1 296 aa19.67■□□□□ 0.74
SMPDL3A-202ENST00000487215 NOBOXO60393 691 aa19.67■□□□□ 0.74
SMPDL3A-202ENST00000487215 TMCC1O94876 653 aa19.67■□□□□ 0.74
SMPDL3A-202ENST00000487215 RPLP0P05388 317 aaKnown RBP19.67■□□□□ 0.74
SMPDL3A-202ENST00000487215 HGFP14210 728 aa19.67■□□□□ 0.74
SMPDL3A-202ENST00000487215 HK3P52790 923 aa19.67■□□□□ 0.74
SMPDL3A-202ENST00000487215 INHBCP55103 352 aa19.67■□□□□ 0.74
SMPDL3A-202ENST00000487215 NOMO3P69849 1222 aa19.67■□□□□ 0.74
SMPDL3A-202ENST00000487215 CCL7P80098 99 aa19.67■□□□□ 0.74
SMPDL3A-202ENST00000487215 SRSF6Q13247 344 aaKnown RBP19.67■□□□□ 0.74
SMPDL3A-202ENST00000487215 TGIF1Q15583 401 aa19.67■□□□□ 0.74
SMPDL3A-202ENST00000487215 C15orf59Q2T9L4 293 aaPredicted RBP19.67■□□□□ 0.74
SMPDL3A-202ENST00000487215 ALG11Q2TAA5 492 aa19.67■□□□□ 0.74
SMPDL3A-202ENST00000487215 LINC00303Q3SY05 128 aa19.67■□□□□ 0.74
SMPDL3A-202ENST00000487215 NAA35Q5VZE5 725 aa19.67■□□□□ 0.74
SMPDL3A-202ENST00000487215 LVRNQ6Q4G3 990 aa19.67■□□□□ 0.74
SMPDL3A-202ENST00000487215 HID1Q8IV36 788 aa19.67■□□□□ 0.74
SMPDL3A-202ENST00000487215 SCG3Q8WXD2 468 aaKnown RBP19.67■□□□□ 0.74
SMPDL3A-202ENST00000487215 CPA5Q8WXQ8 436 aa19.67■□□□□ 0.74
SMPDL3A-202ENST00000487215 TSACCQ96A04 125 aaPredicted RBP19.67■□□□□ 0.74
SMPDL3A-202ENST00000487215 GDAP1L1Q96MZ0 367 aa19.67■□□□□ 0.74
SMPDL3A-202ENST00000487215 MAGEB5Q9BZ81 275 aa19.67■□□□□ 0.74
SMPDL3A-202ENST00000487215 CPEB1Q9BZB8 566 aaKnown RBP19.67■□□□□ 0.74
SMPDL3A-202ENST00000487215 EDEM3Q9BZQ6 932 aa19.67■□□□□ 0.74
SMPDL3A-202ENST00000487215 ACSL6Q9UKU0 697 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms