RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 CLIC5Q9NZA1 410 aa12.44□□□□□ -0.42
PTCD2-204ENST00000486995 NCKIPSDQ9NZQ3 722 aa12.44□□□□□ -0.42
PTCD2-204ENST00000486995 VPS28Q9UK41 221 aa12.44□□□□□ -0.42
PTCD2-204ENST00000486995 NLRC5Q86WI3 1866 aa12.44□□□□□ -0.42
PTCD2-204ENST00000486995 NYNRINQ9P2P1 1898 aaKnown RBP12.44□□□□□ -0.42
PTCD2-204ENST00000486995 PTPRDP23468 1912 aa12.44□□□□□ -0.42
PTCD2-204ENST00000486995 NEMP2A6NFY4 417 aa12.44□□□□□ -0.42
PTCD2-204ENST00000486995 CYBAP13498 195 aa12.44□□□□□ -0.42
PTCD2-204ENST00000486995 CPB1P15086 417 aa12.44□□□□□ -0.42
PTCD2-204ENST00000486995 PAX3P23760 479 aa12.44□□□□□ -0.42
PTCD2-204ENST00000486995 ATP5F1P24539 256 aaPredicted RBP12.44□□□□□ -0.42
PTCD2-204ENST00000486995 AQP4P55087 323 aa12.44□□□□□ -0.42
PTCD2-204ENST00000486995 XIAPP98170 497 aa12.44□□□□□ -0.42
PTCD2-204ENST00000486995 YWHAHQ04917 246 aaPredicted RBP12.44□□□□□ -0.42
PTCD2-204ENST00000486995 HERC3Q15034 1050 aa12.44□□□□□ -0.42
PTCD2-204ENST00000486995 ZNF423Q2M1K9 1284 aa12.44□□□□□ -0.42
PTCD2-204ENST00000486995 PIGGQ5H8A4 983 aa12.44□□□□□ -0.42
PTCD2-204ENST00000486995 SETD3Q86TU7 594 aaPredicted RBP12.44□□□□□ -0.42
PTCD2-204ENST00000486995 UROC1Q96N76 676 aa12.44□□□□□ -0.42
PTCD2-204ENST00000486995 NDNQ99608 321 aa12.44□□□□□ -0.42
PTCD2-204ENST00000486995 OLFM1Q99784 485 aa12.44□□□□□ -0.42
PTCD2-204ENST00000486995 VCX3BQ9H321 246 aa12.44□□□□□ -0.42
PTCD2-204ENST00000486995 POMKQ9H5K3 350 aa12.44□□□□□ -0.42
PTCD2-204ENST00000486995 SUDS3Q9H7L9 328 aaPredicted RBP12.44□□□□□ -0.42
PTCD2-204ENST00000486995 PDP2Q9P2J9 529 aa12.44□□□□□ -0.42
PTCD2-204ENST00000486995 COPG1Q9Y678 874 aaKnown RBP12.44□□□□□ -0.42
PTCD2-204ENST00000486995 TTC3P53804 2025 aa12.44□□□□□ -0.42
PTCD2-204ENST00000486995 MYLKQ15746 1914 aa12.44□□□□□ -0.42
PTCD2-204ENST00000486995 HNRNPLP14866 589 aaKnown RBP eCLIP12.43□□□□□ -0.42
PTCD2-204ENST00000486995 THOP1P52888 689 aa12.43□□□□□ -0.42
PTCD2-204ENST00000486995 CSHL1Q14406 222 aa12.43□□□□□ -0.42
PTCD2-204ENST00000486995 IHHQ14623 411 aa12.43□□□□□ -0.42
PTCD2-204ENST00000486995 TRIP10Q15642 601 aa12.43□□□□□ -0.42
PTCD2-204ENST00000486995 SLC39A12Q504Y0 691 aa12.43□□□□□ -0.42
PTCD2-204ENST00000486995 SH2D4BQ5SQS7 431 aa12.43□□□□□ -0.42
PTCD2-204ENST00000486995 SDHAF4Q5VUM1 108 aa12.43□□□□□ -0.42
PTCD2-204ENST00000486995 KIAA0408Q6ZU52 694 aa12.43□□□□□ -0.42
PTCD2-204ENST00000486995 PIWIL4Q7Z3Z4 852 aaKnown RBP12.43□□□□□ -0.42
PTCD2-204ENST00000486995 RASAL3Q86YV0 1011 aa12.43□□□□□ -0.42
PTCD2-204ENST00000486995 SCN4BQ8IWT1 228 aa12.43□□□□□ -0.42
PTCD2-204ENST00000486995 ZNF683Q8IZ20 524 aa12.43□□□□□ -0.42
PTCD2-204ENST00000486995 PNPLA1Q8N8W4 532 aa12.43□□□□□ -0.42
PTCD2-204ENST00000486995 IMP4Q96G21 291 aaKnown RBP12.43□□□□□ -0.42
PTCD2-204ENST00000486995 SLC39A13Q96H72 371 aa12.43□□□□□ -0.42
PTCD2-204ENST00000486995 SERPINB11Q96P15 392 aa12.43□□□□□ -0.42
PTCD2-204ENST00000486995 SERPINI1Q99574 410 aa12.43□□□□□ -0.42
PTCD2-204ENST00000486995 UPF3AQ9H1J1 476 aaKnown RBP12.43□□□□□ -0.42
PTCD2-204ENST00000486995 HEATR9A2RTY3 570 aa12.43□□□□□ -0.42
PTCD2-204ENST00000486995 J3KR12 359 aa12.43□□□□□ -0.42
PTCD2-204ENST00000486995 SDHDO14521 159 aa12.43□□□□□ -0.42
PTCD2-204ENST00000486995 B4GALT3O60512 393 aa12.43□□□□□ -0.42
PTCD2-204ENST00000486995 TADA2AO75478 443 aa12.43□□□□□ -0.42
PTCD2-204ENST00000486995 UQCRBP14927 111 aa12.43□□□□□ -0.42
PTCD2-204ENST00000486995 KCNA5P22460 613 aa12.43□□□□□ -0.42
PTCD2-204ENST00000486995 DPP6P42658 865 aa12.43□□□□□ -0.42
PTCD2-204ENST00000486995 LEPRP48357 1165 aaKnown RBP12.43□□□□□ -0.42
PTCD2-204ENST00000486995 SLC12A2P55011 1212 aa12.43□□□□□ -0.42
PTCD2-204ENST00000486995 TECRLQ5HYJ1 363 aa12.43□□□□□ -0.42
PTCD2-204ENST00000486995 BNC2Q6ZN30 1099 aaPredicted RBP12.43□□□□□ -0.42
PTCD2-204ENST00000486995 ZNF598Q86UK7 904 aaKnown RBP12.43□□□□□ -0.42
PTCD2-204ENST00000486995 PGAM4Q8N0Y7 254 aa12.43□□□□□ -0.42
PTCD2-204ENST00000486995 UMODL1-AS1Q8N2C9 162 aa12.43□□□□□ -0.42
PTCD2-204ENST00000486995 TCAF2A6NFQ2 919 aa12.42□□□□□ -0.42
PTCD2-204ENST00000486995 MANSC4A6NHS7 340 aaPredicted RBP12.42□□□□□ -0.42
PTCD2-204ENST00000486995 ENO4A6NNW6 628 aa12.42□□□□□ -0.42
PTCD2-204ENST00000486995 PEX1O43933 1283 aa12.42□□□□□ -0.42
PTCD2-204ENST00000486995 SMIM24O75264 130 aa12.42□□□□□ -0.42
PTCD2-204ENST00000486995 XRCC1P18887 633 aaPredicted RBP12.42□□□□□ -0.42
PTCD2-204ENST00000486995 MSX2P35548 267 aaPredicted RBP12.42□□□□□ -0.42
PTCD2-204ENST00000486995 ZNF157P51786 506 aaPredicted RBP12.42□□□□□ -0.42
PTCD2-204ENST00000486995 MAXP61244 160 aa12.42□□□□□ -0.42
PTCD2-204ENST00000486995 SLC10A7Q0GE19 358 aa12.42□□□□□ -0.42
PTCD2-204ENST00000486995 CEACAM7Q14002 265 aa12.42□□□□□ -0.42
PTCD2-204ENST00000486995 OGFRL1Q5TC84 451 aaPredicted RBP12.42□□□□□ -0.42
PTCD2-204ENST00000486995 TFAP2DQ7Z6R9 452 aa12.42□□□□□ -0.42
PTCD2-204ENST00000486995 OR13J1Q8NGT2 312 aa12.42□□□□□ -0.42
PTCD2-204ENST00000486995 HMCESQ96FZ2 354 aa12.42□□□□□ -0.42
PTCD2-204ENST00000486995 KLHL5Q96PQ7 755 aa12.42□□□□□ -0.42
PTCD2-204ENST00000486995 PIDD1Q9HB75 910 aa12.42□□□□□ -0.42
PTCD2-204ENST00000486995 NT5MQ9NPB1 228 aa12.42□□□□□ -0.42
PTCD2-204ENST00000486995 PRDM5Q9NQX1 630 aaPredicted RBP12.42□□□□□ -0.42
PTCD2-204ENST00000486995 FNIP2Q9P278 1114 aa12.42□□□□□ -0.42
PTCD2-204ENST00000486995 PCDHB8Q9UN66 801 aa12.42□□□□□ -0.42
PTCD2-204ENST00000486995 PSMD13Q9UNM6 376 aa12.42□□□□□ -0.42
PTCD2-204ENST00000486995 TLR6Q9Y2C9 796 aa12.42□□□□□ -0.42
PTCD2-204ENST00000486995 PATJQ8NI35 1801 aa12.42□□□□□ -0.42
PTCD2-204ENST00000486995 TRPC5OSA6NMA1 111 aa12.42□□□□□ -0.42
PTCD2-204ENST00000486995 CFLARO15519 480 aa12.42□□□□□ -0.42
PTCD2-204ENST00000486995 SNUPNO95149 360 aaKnown RBP12.42□□□□□ -0.42
PTCD2-204ENST00000486995 RPLP2P05387 115 aaKnown RBP12.42□□□□□ -0.42
PTCD2-204ENST00000486995 MMP2P08253 660 aa12.42□□□□□ -0.42
PTCD2-204ENST00000486995 HAPLN1P10915 354 aaPredicted RBP12.42□□□□□ -0.42
PTCD2-204ENST00000486995 VCLP18206 1134 aa12.42□□□□□ -0.42
PTCD2-204ENST00000486995 CD86P42081 329 aa12.42□□□□□ -0.42
PTCD2-204ENST00000486995 GPR15P49685 360 aa12.42□□□□□ -0.42
PTCD2-204ENST00000486995 SERPINH1P50454 418 aaKnown RBP12.42□□□□□ -0.42
PTCD2-204ENST00000486995 RENBPP51606 427 aa12.42□□□□□ -0.42
PTCD2-204ENST00000486995 KPNA2P52292 529 aaKnown RBP12.42□□□□□ -0.42
PTCD2-204ENST00000486995 PKNOX1P55347 436 aa12.42□□□□□ -0.42
PTCD2-204ENST00000486995 MS4A2Q01362 244 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms