RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-223	ENST00000486991	TTC13	Q8NBP0	860 aa		13.29	□□□□□ -0.28
NR1H3-223	ENST00000486991	OR7D4	Q8NG98	312 aa		13.29	□□□□□ -0.28
NR1H3-223	ENST00000486991	MDM1	Q8TC05	714 aa		13.29	□□□□□ -0.28
NR1H3-223	ENST00000486991	ACTL9	Q8TC94	416 aa		13.29	□□□□□ -0.28
NR1H3-223	ENST00000486991	ADAMTS14	Q8WXS8	1223 aa		13.29	□□□□□ -0.28
NR1H3-223	ENST00000486991	SPON2	Q9BUD6	331 aa		13.29	□□□□□ -0.28
NR1H3-223	ENST00000486991	AP1M1	Q9BXS5	423 aa		13.29	□□□□□ -0.28
NR1H3-223	ENST00000486991	SLC39A8	Q9C0K1	460 aa		13.29	□□□□□ -0.28
NR1H3-223	ENST00000486991	MAGEH1	Q9H213	219 aa		13.29	□□□□□ -0.28
NR1H3-223	ENST00000486991	NOL6	Q9H6R4	1146 aa	Known RBP	13.29	□□□□□ -0.28
NR1H3-223	ENST00000486991	GAREM1	Q9H706	876 aa		13.29	□□□□□ -0.28
NR1H3-223	ENST00000486991	DTL	Q9NZJ0	730 aa		13.29	□□□□□ -0.28
NR1H3-223	ENST00000486991	SLCO3A1	Q9UIG8	710 aa		13.29	□□□□□ -0.28
NR1H3-223	ENST00000486991	CDC23	Q9UJX2	597 aa		13.29	□□□□□ -0.28
NR1H3-223	ENST00000486991	PCOLCE2	Q9UKZ9	415 aa		13.29	□□□□□ -0.28
NR1H3-223	ENST00000486991	TTC7A	Q9ULT0	858 aa	Predicted RBP	13.29	□□□□□ -0.28
NR1H3-223	ENST00000486991	SCML1	Q9UN30	329 aa		13.29	□□□□□ -0.28
NR1H3-223	ENST00000486991	R3HDM2	Q9Y2K5	976 aa	Known RBP	13.29	□□□□□ -0.28
NR1H3-223	ENST00000486991	BPTF	Q12830	3046 aa		13.29	□□□□□ -0.28
NR1H3-223	ENST00000486991	CELSR3	Q9NYQ7	3312 aa		13.28	□□□□□ -0.28
NR1H3-223	ENST00000486991		A0A0D9SEW6	157 aa		13.28	□□□□□ -0.28
NR1H3-223	ENST00000486991	ARHGAP42	A6NI28	874 aa		13.28	□□□□□ -0.28
NR1H3-223	ENST00000486991	TTC34	A8MYJ7	566 aa		13.28	□□□□□ -0.28
NR1H3-223	ENST00000486991	KRIT1	O00522	736 aa		13.28	□□□□□ -0.28
NR1H3-223	ENST00000486991	DNTT	P04053	509 aa		13.28	□□□□□ -0.28
NR1H3-223	ENST00000486991	SRPRA	P08240	638 aa	Known RBP	13.28	□□□□□ -0.28
NR1H3-223	ENST00000486991	ACVRL1	P37023	503 aa		13.28	□□□□□ -0.28
NR1H3-223	ENST00000486991	NR2C2	P49116	596 aa		13.28	□□□□□ -0.28
NR1H3-223	ENST00000486991	CSNK1E	P49674	416 aa	Known RBP	13.28	□□□□□ -0.28
NR1H3-223	ENST00000486991	PAPOLA	P51003	745 aa	Known RBP	13.28	□□□□□ -0.28
NR1H3-223	ENST00000486991	YBEY	P58557	167 aa	Predicted RBP	13.28	□□□□□ -0.28
NR1H3-223	ENST00000486991	SULT2A1	Q06520	285 aa		13.28	□□□□□ -0.28
NR1H3-223	ENST00000486991	HLA-B	Q31612	363 aa		13.28	□□□□□ -0.28
NR1H3-223	ENST00000486991	PARP15	Q460N3	678 aa		13.28	□□□□□ -0.28
NR1H3-223	ENST00000486991	TTC31	Q49AM3	519 aa	Predicted RBP	13.28	□□□□□ -0.28
NR1H3-223	ENST00000486991	C9orf64	Q5T6V5	341 aa		13.28	□□□□□ -0.28
NR1H3-223	ENST00000486991	AFMID	Q63HM1	303 aa		13.28	□□□□□ -0.28
NR1H3-223	ENST00000486991	LAYN	Q6UX15	382 aa		13.28	□□□□□ -0.28
NR1H3-223	ENST00000486991	CCNI2	Q6ZMN8	369 aa	Predicted RBP	13.28	□□□□□ -0.28
NR1H3-223	ENST00000486991	BZW1	Q7L1Q6	419 aa	Known RBP	13.28	□□□□□ -0.28
NR1H3-223	ENST00000486991	CCNY	Q8ND76	341 aa		13.28	□□□□□ -0.28
NR1H3-223	ENST00000486991	C1orf216	Q8TAB5	229 aa		13.28	□□□□□ -0.28
NR1H3-223	ENST00000486991	C1orf54	Q8WWF1	131 aa		13.28	□□□□□ -0.28
NR1H3-223	ENST00000486991	ATG4A	Q8WYN0	398 aa		13.28	□□□□□ -0.28
NR1H3-223	ENST00000486991	SNX19	Q92543	992 aa		13.28	□□□□□ -0.28
NR1H3-223	ENST00000486991	ARHGEF2	Q92974	986 aa	Known RBP	13.28	□□□□□ -0.28
NR1H3-223	ENST00000486991	HMCES	Q96FZ2	354 aa		13.28	□□□□□ -0.28
NR1H3-223	ENST00000486991	FEM1A	Q9BSK4	669 aa		13.28	□□□□□ -0.28
NR1H3-223	ENST00000486991	RSPH9	Q9H1X1	276 aa	Predicted RBP	13.28	□□□□□ -0.28
NR1H3-223	ENST00000486991	C6orf106	Q9H6K1	298 aa	Predicted RBP	13.28	□□□□□ -0.28
NR1H3-223	ENST00000486991	LRRC19	Q9H756	370 aa		13.28	□□□□□ -0.28
NR1H3-223	ENST00000486991	ATP13A1	Q9HD20	1204 aa		13.28	□□□□□ -0.28
NR1H3-223	ENST00000486991	RNF14	Q9UBS8	474 aa		13.28	□□□□□ -0.28
NR1H3-223	ENST00000486991	VPS28	Q9UK41	221 aa		13.28	□□□□□ -0.28
NR1H3-223	ENST00000486991	NCKAP1	Q9Y2A7	1128 aa		13.28	□□□□□ -0.28
NR1H3-223	ENST00000486991	BTBD3	Q9Y2F9	522 aa		13.28	□□□□□ -0.28
NR1H3-223	ENST00000486991	ADAMTS20	P59510	1910 aa		13.28	□□□□□ -0.28
NR1H3-223	ENST00000486991	PTPRB	P23467	1997 aa		13.27	□□□□□ -0.28
NR1H3-223	ENST00000486991	GOLGA6L10	A0A0M3HER8	536 aa		13.27	□□□□□ -0.29
NR1H3-223	ENST00000486991		H7C0C1	242 aa		13.27	□□□□□ -0.29
NR1H3-223	ENST00000486991	PDE2A	O00408	941 aa	Predicted RBP	13.27	□□□□□ -0.29
NR1H3-223	ENST00000486991	PPP1R12A	O14974	1030 aa	Predicted RBP	13.27	□□□□□ -0.29
NR1H3-223	ENST00000486991	MCF2L	O15068	1137 aa		13.27	□□□□□ -0.29
NR1H3-223	ENST00000486991	BCAT2	O15382	392 aa	Predicted RBP	13.27	□□□□□ -0.29
NR1H3-223	ENST00000486991	SIN3B	O75182	1162 aa		13.27	□□□□□ -0.29
NR1H3-223	ENST00000486991	ATXN1L	P0C7T5	689 aa	Known RBP	13.27	□□□□□ -0.29
NR1H3-223	ENST00000486991	VAV1	P15498	845 aa		13.27	□□□□□ -0.29
NR1H3-223	ENST00000486991	MX2	P20592	715 aa		13.27	□□□□□ -0.29
NR1H3-223	ENST00000486991	ACSL1	P33121	698 aa		13.27	□□□□□ -0.29
NR1H3-223	ENST00000486991	ETFB	P38117	255 aa		13.27	□□□□□ -0.29
NR1H3-223	ENST00000486991	ATP5O	P48047	213 aa		13.27	□□□□□ -0.29
NR1H3-223	ENST00000486991	VASP	P50552	380 aa	Predicted RBP	13.27	□□□□□ -0.29
NR1H3-223	ENST00000486991	EIF3E	P60228	445 aa	Known RBP	13.27	□□□□□ -0.29
NR1H3-223	ENST00000486991	ECT2L	Q008S8	904 aa		13.27	□□□□□ -0.29
NR1H3-223	ENST00000486991	CKAP4	Q07065	602 aa	Known RBP	13.27	□□□□□ -0.29
NR1H3-223	ENST00000486991	GALNT2	Q10471	571 aa		13.27	□□□□□ -0.29
NR1H3-223	ENST00000486991	SNX1	Q13596	522 aa		13.27	□□□□□ -0.29
NR1H3-223	ENST00000486991	TUBB2A	Q13885	445 aa		13.27	□□□□□ -0.29
NR1H3-223	ENST00000486991	HNRNPD	Q14103	355 aa	Known RBP	13.27	□□□□□ -0.29
NR1H3-223	ENST00000486991	PDK1	Q15118	436 aa		13.27	□□□□□ -0.29
NR1H3-223	ENST00000486991	NOMO1	Q15155	1222 aa		13.27	□□□□□ -0.29
NR1H3-223	ENST00000486991	SIX1	Q15475	284 aa	Predicted RBP	13.27	□□□□□ -0.29
NR1H3-223	ENST00000486991	WHAMMP3	Q1A5X7	153 aa		13.27	□□□□□ -0.29
NR1H3-223	ENST00000486991	ZNF776	Q68DI1	518 aa	Predicted RBP	13.27	□□□□□ -0.29
NR1H3-223	ENST00000486991	ZNF783	Q6ZMS7	281 aa		13.27	□□□□□ -0.29
NR1H3-223	ENST00000486991	B4GALNT4	Q76KP1	1039 aa		13.27	□□□□□ -0.29
NR1H3-223	ENST00000486991	ZC3H18	Q86VM9	953 aa	Known RBP	13.27	□□□□□ -0.29
NR1H3-223	ENST00000486991	ATPAF2	Q8N5M1	289 aa		13.27	□□□□□ -0.29
NR1H3-223	ENST00000486991	FRS2	Q8WU20	508 aa		13.27	□□□□□ -0.29
NR1H3-223	ENST00000486991	LRRN4	Q8WUT4	740 aa		13.27	□□□□□ -0.29
NR1H3-223	ENST00000486991	RPL10L	Q96L21	214 aa	Known RBP	13.27	□□□□□ -0.29
NR1H3-223	ENST00000486991	FAM129B	Q96TA1	746 aa		13.27	□□□□□ -0.29
NR1H3-223	ENST00000486991	TUBB2B	Q9BVA1	445 aa		13.27	□□□□□ -0.29
NR1H3-223	ENST00000486991	ZDHHC5	Q9C0B5	715 aa		13.27	□□□□□ -0.29
NR1H3-223	ENST00000486991	TM7SF3	Q9NS93	570 aa		13.27	□□□□□ -0.29
NR1H3-223	ENST00000486991	TOR4A	Q9NXH8	423 aa		13.27	□□□□□ -0.29
NR1H3-223	ENST00000486991	SERGEF	Q9UGK8	458 aa		13.27	□□□□□ -0.29
NR1H3-223	ENST00000486991	GPSM3	Q9Y4H4	160 aa		13.27	□□□□□ -0.29
NR1H3-223	ENST00000486991	MRFAP1	Q9Y605	127 aa		13.27	□□□□□ -0.29
NR1H3-223	ENST00000486991	IGSF10	Q6WRI0	2623 aa		13.27	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms